RNA–Protein interactions for RNA: ENST00000451876.5

CPSF4-207, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5 BASIC

Gene CPSF4, Length 1,644 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-207ENST00000451876 EMILIN1Q9Y6C2 1016 aa32.73■■■□□ 2.83
CPSF4-207ENST00000451876 AXIN2Q9Y2T1 843 aa32.73■■■□□ 2.83
CPSF4-207ENST00000451876 PARD3Q8TEW0 1356 aa32.7■■■□□ 2.83
CPSF4-207ENST00000451876 POLKQ9UBT6 870 aa32.7■■■□□ 2.83
CPSF4-207ENST00000451876 COL5A2P05997 1499 aaPredicted RBP32.7■■■□□ 2.82
CPSF4-207ENST00000451876 SMG6Q86US8 1419 aaKnown RBP32.69■■■□□ 2.82
CPSF4-207ENST00000451876 RTL1A6NKG5 1358 aa32.69■■■□□ 2.82
CPSF4-207ENST00000451876 USP21Q9UK80 565 aa32.68■■■□□ 2.82
CPSF4-207ENST00000451876 HOXC9P31274 260 aa32.67■■■□□ 2.82
CPSF4-207ENST00000451876 AMPHP49418 695 aa32.67■■■□□ 2.82
CPSF4-207ENST00000451876 RGS17Q9UGC6 210 aaPredicted RBP32.67■■■□□ 2.82
CPSF4-207ENST00000451876 PPM1GO15355 546 aaPredicted RBP32.66■■■□□ 2.82
CPSF4-207ENST00000451876 IP6K1Q92551 441 aa32.66■■■□□ 2.82
CPSF4-207ENST00000451876 FLT4P35916 1363 aa32.66■■■□□ 2.82
CPSF4-207ENST00000451876 PHF23Q9BUL5 403 aaPredicted RBP32.66■■■□□ 2.82
CPSF4-207ENST00000451876 KIF24Q5T7B8 1368 aa32.65■■■□□ 2.82
CPSF4-207ENST00000451876 BLMP54132 1417 aaPredicted RBP32.65■■■□□ 2.82
CPSF4-207ENST00000451876 UNC5CLQ8IV45 518 aa32.64■■■□□ 2.82
CPSF4-207ENST00000451876 STRN4Q9NRL3 753 aa32.62■■■□□ 2.81
CPSF4-207ENST00000451876 CDK12Q9NYV4 1490 aaPredicted RBP32.62■■■□□ 2.81
CPSF4-207ENST00000451876 HSP90AB2PQ58FF8 381 aa32.62■■■□□ 2.81
CPSF4-207ENST00000451876 RGPD2P0DJD1 1756 aa32.61■■■□□ 2.81
CPSF4-207ENST00000451876 ERBB3P21860 1342 aa32.59■■■□□ 2.81
CPSF4-207ENST00000451876 PPP2R1AP30153 589 aa32.59■■■□□ 2.81
CPSF4-207ENST00000451876 MTHFSP49914 203 aa32.59■■■□□ 2.81
CPSF4-207ENST00000451876 ATRNO75882 1429 aa32.59■■■□□ 2.81
CPSF4-207ENST00000451876 INSRP06213 1382 aa32.59■■■□□ 2.81
CPSF4-207ENST00000451876 ZNF772Q68DY9 489 aaPredicted RBP32.59■■■□□ 2.81
CPSF4-207ENST00000451876 PRKRIP1Q9H875 184 aaPredicted RBP32.59■■■□□ 2.81
CPSF4-207ENST00000451876 FAM208AQ9UK61 1670 aaKnown RBP32.58■■■□□ 2.81
CPSF4-207ENST00000451876 RALBP1Q15311 655 aa32.57■■■□□ 2.8
CPSF4-207ENST00000451876 EVA1CP58658 441 aa32.56■■■□□ 2.8
CPSF4-207ENST00000451876 LARP1Q6PKG0 1096 aaKnown RBP32.56■■■□□ 2.8
CPSF4-207ENST00000451876 ANKRD24Q8TF21 1146 aa32.56■■■□□ 2.8
CPSF4-207ENST00000451876 WDR17Q8IZU2 1322 aa32.56■■■□□ 2.8
CPSF4-207ENST00000451876 LTV1Q96GA3 475 aaPredicted RBP32.55■■■□□ 2.8
CPSF4-207ENST00000451876 GLI3P10071 1580 aa32.55■■■□□ 2.8
CPSF4-207ENST00000451876 VPS72Q15906 364 aa32.53■■■□□ 2.8
CPSF4-207ENST00000451876 QTRT2Q9H974 415 aaKnown RBP32.53■■■□□ 2.8
CPSF4-207ENST00000451876 TRPC5Q9UL62 973 aaPredicted RBP32.53■■■□□ 2.8
CPSF4-207ENST00000451876 CRB1P82279 1406 aa32.52■■■□□ 2.8
CPSF4-207ENST00000451876 POTEAQ6S8J7 498 aa32.52■■■□□ 2.8
CPSF4-207ENST00000451876 CSB-PGBD3P0DP91 1061 aa32.51■■■□□ 2.8
CPSF4-207ENST00000451876 COL3A1P02461 1466 aaPredicted RBP32.51■■■□□ 2.8
CPSF4-207ENST00000451876 CCDC9Q9Y3X0 531 aaKnown RBP32.49■■■□□ 2.79
CPSF4-207ENST00000451876 SPATA31A5Q5VU36 1347 aa32.49■■■□□ 2.79
CPSF4-207ENST00000451876 SPATA31A7Q8IWB4 1347 aa32.49■■■□□ 2.79
CPSF4-207ENST00000451876 MYBBP1AQ9BQG0 1328 aaKnown RBP32.49■■■□□ 2.79
CPSF4-207ENST00000451876 WNK3Q9BYP7 1800 aa32.48■■■□□ 2.79
CPSF4-207ENST00000451876 TOM1L2Q6ZVM7 507 aa32.48■■■□□ 2.79
CPSF4-207ENST00000451876 EIF4A2Q14240 407 aaKnown RBP32.48■■■□□ 2.79
CPSF4-207ENST00000451876 USP35Q9P2H5 1018 aa32.48■■■□□ 2.79
CPSF4-207ENST00000451876 GJD4Q96KN9 370 aaPredicted RBP32.47■■■□□ 2.79
CPSF4-207ENST00000451876 SPATA31A1Q5TZJ5 1347 aa32.47■■■□□ 2.79
CPSF4-207ENST00000451876 ANP32CO43423 234 aa32.46■■■□□ 2.79
CPSF4-207ENST00000451876 RGPD1P0DJD0 1748 aa32.45■■■□□ 2.79
CPSF4-207ENST00000451876 NLRP2Q9NX02 1062 aa32.44■■■□□ 2.78
CPSF4-207ENST00000451876 NBPF6Q5VWK0 638 aa32.42■■■□□ 2.78
CPSF4-207ENST00000451876 NBPF4Q96M43 638 aa32.42■■■□□ 2.78
CPSF4-207ENST00000451876 CARD10Q9BWT7 1032 aa32.41■■■□□ 2.78
CPSF4-207ENST00000451876 DIEXFQ68CQ4 756 aaKnown RBP32.4■■■□□ 2.78
CPSF4-207ENST00000451876 IL13P35225 146 aa32.4■■■□□ 2.78
CPSF4-207ENST00000451876 RBM6P78332 1123 aaKnown RBP32.39■■■□□ 2.78
CPSF4-207ENST00000451876 USHBP1Q8N6Y0 703 aa32.39■■■□□ 2.78
CPSF4-207ENST00000451876 THSD7AQ9UPZ6 1657 aa32.38■■■□□ 2.77
CPSF4-207ENST00000451876 TCP11L2Q8N4U5 519 aa32.37■■■□□ 2.77
CPSF4-207ENST00000451876 CFAP53Q96M91 514 aa32.37■■■□□ 2.77
CPSF4-207ENST00000451876 EYA1Q99502 592 aa32.37■■■□□ 2.77
CPSF4-207ENST00000451876 NCAPD2Q15021 1401 aa32.37■■■□□ 2.77
CPSF4-207ENST00000451876 DIAPH1O60610 1272 aaKnown RBP32.37■■■□□ 2.77
CPSF4-207ENST00000451876 RXRBP28702 533 aa32.37■■■□□ 2.77
CPSF4-207ENST00000451876 FAM98CQ17RN3 349 aaKnown RBP32.36■■■□□ 2.77
CPSF4-207ENST00000451876 IGSF1Q8N6C5 1336 aa32.34■■■□□ 2.77
CPSF4-207ENST00000451876 THRAP3Q9Y2W1 955 aaKnown RBP32.33■■■□□ 2.77
CPSF4-207ENST00000451876 PARP4Q9UKK3 1724 aaKnown RBP32.33■■■□□ 2.77
CPSF4-207ENST00000451876 DISP2A7MBM2 1401 aa32.33■■■□□ 2.77
CPSF4-207ENST00000451876 RGS12O14924 1447 aa32.32■■■□□ 2.76
CPSF4-207ENST00000451876 BARGINQ6ZT62 677 aa32.32■■■□□ 2.76
CPSF4-207ENST00000451876 LRRC37A3O60309 1634 aa32.31■■■□□ 2.76
CPSF4-207ENST00000451876 BRWD3Q6RI45 1802 aa32.31■■■□□ 2.76
CPSF4-207ENST00000451876 MEGF6O75095 1541 aa32.31■■■□□ 2.76
CPSF4-207ENST00000451876 ONECUT3O60422 494 aaPredicted RBP32.29■■■□□ 2.76
CPSF4-207ENST00000451876 CCDC184Q52MB2 194 aa32.29■■■□□ 2.76
CPSF4-207ENST00000451876 AEBP1Q8IUX7 1158 aa32.28■■■□□ 2.76
CPSF4-207ENST00000451876 U2SURPO15042 1029 aaKnown RBP32.26■■■□□ 2.76
CPSF4-207ENST00000451876 KDRP35968 1356 aa32.25■■■□□ 2.75
CPSF4-207ENST00000451876 A0A0G2JS52 829 aa32.25■■■□□ 2.75
CPSF4-207ENST00000451876 IL2RBP14784 551 aa32.25■■■□□ 2.75
CPSF4-207ENST00000451876 MYT1Q01538 1121 aa32.25■■■□□ 2.75
CPSF4-207ENST00000451876 SHANK3Q9BYB0 1731 aa32.24■■■□□ 2.75
CPSF4-207ENST00000451876 SULT6B1Q6IMI4 303 aa32.24■■■□□ 2.75
CPSF4-207ENST00000451876 SEPT12Q8IYM1 358 aa32.23■■■□□ 2.75
CPSF4-207ENST00000451876 HMOX1P09601 288 aa32.22■■■□□ 2.75
CPSF4-207ENST00000451876 NUDCQ9Y266 331 aa32.22■■■□□ 2.75
CPSF4-207ENST00000451876 OVOS2A0A0G2JMS6 1433 aa32.22■■■□□ 2.75
CPSF4-207ENST00000451876 PKD1L3Q7Z443 1732 aa32.22■■■□□ 2.75
CPSF4-207ENST00000451876 CDCA7Q9BWT1 371 aaPredicted RBP32.2■■■□□ 2.75
CPSF4-207ENST00000451876 RAPGEF4Q8WZA2 1011 aa32.19■■■□□ 2.74
CPSF4-207ENST00000451876 EP400Q96L91 3159 aa32.18■■■□□ 2.74
CPSF4-207ENST00000451876 TNS2Q63HR2 1409 aa32.18■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms