RNA–Protein interactions for RNA: ENST00000450643.5

RHBDF1-206, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 4

Gene RHBDF1, Length 615 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-206ENST00000450643 EMILIN1Q9Y6C2 1016 aa23.11■■□□□ 1.29
RHBDF1-206ENST00000450643 CAMTA1Q9Y6Y1 1673 aa23.11■■□□□ 1.29
RHBDF1-206ENST00000450643 USP21Q9UK80 565 aa23.1■■□□□ 1.29
RHBDF1-206ENST00000450643 RTL1A6NKG5 1358 aa23.1■■□□□ 1.29
RHBDF1-206ENST00000450643 STRN4Q9NRL3 753 aa23.09■■□□□ 1.29
RHBDF1-206ENST00000450643 FLT4P35916 1363 aa23.08■■□□□ 1.29
RHBDF1-206ENST00000450643 COL5A2P05997 1499 aaPredicted RBP23.07■■□□□ 1.28
RHBDF1-206ENST00000450643 PARD3Q8TEW0 1356 aa23.07■■□□□ 1.28
RHBDF1-206ENST00000450643 EVA1CP58658 441 aa23.07■■□□□ 1.28
RHBDF1-206ENST00000450643 FNBP4Q8N3X1 1017 aaPredicted RBP23.07■■□□□ 1.28
RHBDF1-206ENST00000450643 POLKQ9UBT6 870 aa23.07■■□□□ 1.28
RHBDF1-206ENST00000450643 BLMP54132 1417 aaPredicted RBP23.07■■□□□ 1.28
RHBDF1-206ENST00000450643 HOXC9P31274 260 aa23.06■■□□□ 1.28
RHBDF1-206ENST00000450643 IP6K1Q92551 441 aa23.06■■□□□ 1.28
RHBDF1-206ENST00000450643 FAM208AQ9UK61 1670 aaKnown RBP23.06■■□□□ 1.28
RHBDF1-206ENST00000450643 BCL9LQ86UU0 1499 aa23.05■■□□□ 1.28
RHBDF1-206ENST00000450643 KIF24Q5T7B8 1368 aa23.05■■□□□ 1.28
RHBDF1-206ENST00000450643 CSB-PGBD3P0DP91 1061 aa23.05■■□□□ 1.28
RHBDF1-206ENST00000450643 ZNF772Q68DY9 489 aaPredicted RBP23.05■■□□□ 1.28
RHBDF1-206ENST00000450643 UNC5CLQ8IV45 518 aa23.05■■□□□ 1.28
RHBDF1-206ENST00000450643 LTV1Q96GA3 475 aaPredicted RBP23.05■■□□□ 1.28
RHBDF1-206ENST00000450643 AXIN2Q9Y2T1 843 aa23.05■■□□□ 1.28
RHBDF1-206ENST00000450643 CCDC9Q9Y3X0 531 aaKnown RBP23.05■■□□□ 1.28
RHBDF1-206ENST00000450643 SMG6Q86US8 1419 aaKnown RBP23.05■■□□□ 1.28
RHBDF1-206ENST00000450643 CDK12Q9NYV4 1490 aaPredicted RBP23.05■■□□□ 1.28
RHBDF1-206ENST00000450643 RALBP1Q15311 655 aa23.03■■□□□ 1.28
RHBDF1-206ENST00000450643 RGPD2P0DJD1 1756 aa23.02■■□□□ 1.28
RHBDF1-206ENST00000450643 ANKRD24Q8TF21 1146 aa23.02■■□□□ 1.28
RHBDF1-206ENST00000450643 INSRP06213 1382 aa23.01■■□□□ 1.27
RHBDF1-206ENST00000450643 PPP2R1AP30153 589 aa23.01■■□□□ 1.27
RHBDF1-206ENST00000450643 MTHFSP49914 203 aa23.01■■□□□ 1.27
RHBDF1-206ENST00000450643 HSP90AB2PQ58FF8 381 aa23.01■■□□□ 1.27
RHBDF1-206ENST00000450643 ANP32CO43423 234 aa23■■□□□ 1.27
RHBDF1-206ENST00000450643 TRPC5Q9UL62 973 aaPredicted RBP23■■□□□ 1.27
RHBDF1-206ENST00000450643 ATRNO75882 1429 aa22.99■■□□□ 1.27
RHBDF1-206ENST00000450643 LARP1Q6PKG0 1096 aaKnown RBP22.99■■□□□ 1.27
RHBDF1-206ENST00000450643 TOM1L2Q6ZVM7 507 aa22.99■■□□□ 1.27
RHBDF1-206ENST00000450643 PRKRIP1Q9H875 184 aaPredicted RBP22.99■■□□□ 1.27
RHBDF1-206ENST00000450643 QTRT2Q9H974 415 aaKnown RBP22.99■■□□□ 1.27
RHBDF1-206ENST00000450643 ERBB3P21860 1342 aa22.99■■□□□ 1.27
RHBDF1-206ENST00000450643 WDR17Q8IZU2 1322 aa22.99■■□□□ 1.27
RHBDF1-206ENST00000450643 CRB1P82279 1406 aa22.98■■□□□ 1.27
RHBDF1-206ENST00000450643 VPS72Q15906 364 aa22.97■■□□□ 1.27
RHBDF1-206ENST00000450643 RGS17Q9UGC6 210 aaPredicted RBP22.97■■□□□ 1.27
RHBDF1-206ENST00000450643 MYBBP1AQ9BQG0 1328 aaKnown RBP22.97■■□□□ 1.27
RHBDF1-206ENST00000450643 CFAP53Q96M91 514 aa22.96■■□□□ 1.27
RHBDF1-206ENST00000450643 NLRP2Q9NX02 1062 aa22.96■■□□□ 1.27
RHBDF1-206ENST00000450643 USP35Q9P2H5 1018 aa22.96■■□□□ 1.27
RHBDF1-206ENST00000450643 WNK3Q9BYP7 1800 aa22.96■■□□□ 1.27
RHBDF1-206ENST00000450643 GLI3P10071 1580 aa22.95■■□□□ 1.26
RHBDF1-206ENST00000450643 SPATA31A5Q5VU36 1347 aa22.93■■□□□ 1.26
RHBDF1-206ENST00000450643 SPATA31A7Q8IWB4 1347 aa22.93■■□□□ 1.26
RHBDF1-206ENST00000450643 POTEAQ6S8J7 498 aa22.93■■□□□ 1.26
RHBDF1-206ENST00000450643 EIF4A2Q14240 407 aaKnown RBP22.92■■□□□ 1.26
RHBDF1-206ENST00000450643 DIEXFQ68CQ4 756 aaKnown RBP22.92■■□□□ 1.26
RHBDF1-206ENST00000450643 GJD4Q96KN9 370 aaPredicted RBP22.92■■□□□ 1.26
RHBDF1-206ENST00000450643 SPATA31A1Q5TZJ5 1347 aa22.91■■□□□ 1.26
RHBDF1-206ENST00000450643 COL3A1P02461 1466 aaPredicted RBP22.91■■□□□ 1.26
RHBDF1-206ENST00000450643 A0A0G2JS52 829 aa22.9■■□□□ 1.26
RHBDF1-206ENST00000450643 RBM6P78332 1123 aaKnown RBP22.9■■□□□ 1.26
RHBDF1-206ENST00000450643 MYT1Q01538 1121 aa22.9■■□□□ 1.26
RHBDF1-206ENST00000450643 DIAPH1O60610 1272 aaKnown RBP22.89■■□□□ 1.25
RHBDF1-206ENST00000450643 RXRBP28702 533 aa22.89■■□□□ 1.25
RHBDF1-206ENST00000450643 USHBP1Q8N6Y0 703 aa22.89■■□□□ 1.25
RHBDF1-206ENST00000450643 CARD10Q9BWT7 1032 aa22.89■■□□□ 1.25
RHBDF1-206ENST00000450643 TCP11L2Q8N4U5 519 aa22.88■■□□□ 1.25
RHBDF1-206ENST00000450643 RGPD1P0DJD0 1748 aa22.88■■□□□ 1.25
RHBDF1-206ENST00000450643 FAM98CQ17RN3 349 aaKnown RBP22.87■■□□□ 1.25
RHBDF1-206ENST00000450643 PARP4Q9UKK3 1724 aaKnown RBP22.86■■□□□ 1.25
RHBDF1-206ENST00000450643 U2SURPO15042 1029 aaKnown RBP22.86■■□□□ 1.25
RHBDF1-206ENST00000450643 NBPF6Q5VWK0 638 aa22.86■■□□□ 1.25
RHBDF1-206ENST00000450643 NBPF4Q96M43 638 aa22.86■■□□□ 1.25
RHBDF1-206ENST00000450643 EYA1Q99502 592 aa22.85■■□□□ 1.25
RHBDF1-206ENST00000450643 IL13P35225 146 aa22.84■■□□□ 1.25
RHBDF1-206ENST00000450643 THRAP3Q9Y2W1 955 aaKnown RBP22.84■■□□□ 1.25
RHBDF1-206ENST00000450643 THSD7AQ9UPZ6 1657 aa22.84■■□□□ 1.25
RHBDF1-206ENST00000450643 NUDCQ9Y266 331 aa22.83■■□□□ 1.25
RHBDF1-206ENST00000450643 BRWD3Q6RI45 1802 aa22.82■■□□□ 1.24
RHBDF1-206ENST00000450643 LRRC37A3O60309 1634 aa22.82■■□□□ 1.24
RHBDF1-206ENST00000450643 IGSF1Q8N6C5 1336 aa22.82■■□□□ 1.24
RHBDF1-206ENST00000450643 BARGINQ6ZT62 677 aa22.81■■□□□ 1.24
RHBDF1-206ENST00000450643 RAPGEF4Q8WZA2 1011 aa22.8■■□□□ 1.24
RHBDF1-206ENST00000450643 RGS12O14924 1447 aa22.8■■□□□ 1.24
RHBDF1-206ENST00000450643 MEGF6O75095 1541 aa22.79■■□□□ 1.24
RHBDF1-206ENST00000450643 IL2RBP14784 551 aa22.79■■□□□ 1.24
RHBDF1-206ENST00000450643 DISP2A7MBM2 1401 aa22.79■■□□□ 1.24
RHBDF1-206ENST00000450643 NCAPD2Q15021 1401 aa22.79■■□□□ 1.24
RHBDF1-206ENST00000450643 HMOX1P09601 288 aa22.78■■□□□ 1.24
RHBDF1-206ENST00000450643 SULT6B1Q6IMI4 303 aa22.78■■□□□ 1.24
RHBDF1-206ENST00000450643 SEPT12Q8IYM1 358 aa22.78■■□□□ 1.24
RHBDF1-206ENST00000450643 CDCA7Q9BWT1 371 aaPredicted RBP22.78■■□□□ 1.24
RHBDF1-206ENST00000450643 U2AF1L5P0DN76 240 aaPredicted RBP22.77■■□□□ 1.24
RHBDF1-206ENST00000450643 TATP17735 454 aaPredicted RBP22.77■■□□□ 1.24
RHBDF1-206ENST00000450643 U2AF1Q01081 240 aaKnown RBP eCLIP22.77■■□□□ 1.24
RHBDF1-206ENST00000450643 AEBP1Q8IUX7 1158 aa22.77■■□□□ 1.24
RHBDF1-206ENST00000450643 MRS2Q9HD23 443 aa22.76■■□□□ 1.23
RHBDF1-206ENST00000450643 WDR43Q15061 677 aaKnown RBP eCLIP22.75■■□□□ 1.23
RHBDF1-206ENST00000450643 PKD1L3Q7Z443 1732 aa22.74■■□□□ 1.23
RHBDF1-206ENST00000450643 DDB1Q16531 1140 aa22.74■■□□□ 1.23
RHBDF1-206ENST00000450643 OVOS2A0A0G2JMS6 1433 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms