RNA–Protein interactions for RNA: ENST00000447540.5

CHD9-203, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 11,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-203ENST00000447540 VEZTQ9HBM0 779 aa3.46□□□□□ -1.86
CHD9-203ENST00000447540 THOC2Q8NI27 1593 aaKnown RBP3.46□□□□□ -1.86
CHD9-203ENST00000447540 CUL7Q14999 1698 aa3.46□□□□□ -1.86
CHD9-203ENST00000447540 PLCB2Q00722 1185 aa3.46□□□□□ -1.86
CHD9-203ENST00000447540 CC2D2AQ9P2K1 1620 aa3.46□□□□□ -1.86
CHD9-203ENST00000447540 PLCD3Q8N3E9 789 aa3.46□□□□□ -1.86
CHD9-203ENST00000447540 JMYQ8N9B5 988 aa3.46□□□□□ -1.86
CHD9-203ENST00000447540 UBA5Q9GZZ9 404 aa3.46□□□□□ -1.86
CHD9-203ENST00000447540 PSD3Q9NYI0 1048 aa3.46□□□□□ -1.86
CHD9-203ENST00000447540 ARHGAP25P42331 645 aa3.45□□□□□ -1.86
CHD9-203ENST00000447540 SUGP1Q8IWZ8 645 aaKnown RBP3.45□□□□□ -1.86
CHD9-203ENST00000447540 DDX41Q9UJV9 622 aaKnown RBP3.45□□□□□ -1.86
CHD9-203ENST00000447540 MCTP2Q6DN12 878 aa3.45□□□□□ -1.86
CHD9-203ENST00000447540 SEPT14Q6ZU15 432 aa3.45□□□□□ -1.86
CHD9-203ENST00000447540 PRPHP41219 470 aa3.45□□□□□ -1.86
CHD9-203ENST00000447540 MPHOSPH6Q99547 160 aaKnown RBP3.45□□□□□ -1.86
CHD9-203ENST00000447540 E9PSI1 815 aa3.45□□□□□ -1.86
CHD9-203ENST00000447540 NPHP1O15259 732 aa3.45□□□□□ -1.86
CHD9-203ENST00000447540 TMEM132AQ24JP5 1023 aa3.45□□□□□ -1.86
CHD9-203ENST00000447540 MORC2Q9Y6X9 1032 aaPredicted RBP3.45□□□□□ -1.86
CHD9-203ENST00000447540 RLBP1P12271 317 aa3.45□□□□□ -1.86
CHD9-203ENST00000447540 MAP9Q49MG5 647 aa3.45□□□□□ -1.86
CHD9-203ENST00000447540 WWC2Q6AWC2 1192 aa3.45□□□□□ -1.86
CHD9-203ENST00000447540 NBPF10Q6P3W6 841 aaKnown RBP3.45□□□□□ -1.86
CHD9-203ENST00000447540 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.45□□□□□ -1.86
CHD9-203ENST00000447540 DYDC1Q8WWB3 177 aa3.45□□□□□ -1.86
CHD9-203ENST00000447540 CFAP53Q96M91 514 aa3.45□□□□□ -1.86
CHD9-203ENST00000447540 TBC1D22AQ8WUA7 517 aa3.45□□□□□ -1.86
CHD9-203ENST00000447540 NUB1Q9Y5A7 615 aa3.45□□□□□ -1.86
CHD9-203ENST00000447540 SASH1O94885 1247 aa3.45□□□□□ -1.86
CHD9-203ENST00000447540 LRSAM1Q6UWE0 723 aa3.45□□□□□ -1.86
CHD9-203ENST00000447540 B4GALNT4Q76KP1 1039 aa3.45□□□□□ -1.86
CHD9-203ENST00000447540 UNC13AQ9UPW8 1703 aa3.45□□□□□ -1.86
CHD9-203ENST00000447540 A0A087WUV0 522 aaPredicted RBP3.45□□□□□ -1.86
CHD9-203ENST00000447540 IRX5P78411 483 aaPredicted RBP3.45□□□□□ -1.86
CHD9-203ENST00000447540 PIK3R5Q8WYR1 880 aa3.45□□□□□ -1.86
CHD9-203ENST00000447540 LZICQ8WZA0 190 aa3.45□□□□□ -1.86
CHD9-203ENST00000447540 ZNF428Q96B54 188 aa3.45□□□□□ -1.86
CHD9-203ENST00000447540 ANKRD27Q96NW4 1050 aa3.45□□□□□ -1.86
CHD9-203ENST00000447540 SH3GL3Q99963 347 aa3.45□□□□□ -1.86
CHD9-203ENST00000447540 RABEP2Q9H5N1 569 aa3.45□□□□□ -1.86
CHD9-203ENST00000447540 EBAG9O00559 213 aa3.45□□□□□ -1.86
CHD9-203ENST00000447540 YY1P25490 414 aa3.45□□□□□ -1.86
CHD9-203ENST00000447540 SPC24Q8NBT2 197 aa3.45□□□□□ -1.86
CHD9-203ENST00000447540 PDCP20941 246 aa3.44□□□□□ -1.86
CHD9-203ENST00000447540 RIPK4P57078 832 aa3.44□□□□□ -1.86
CHD9-203ENST00000447540 ITFG2Q969R8 447 aa3.44□□□□□ -1.86
CHD9-203ENST00000447540 HOMER3Q9NSC5 361 aa3.44□□□□□ -1.86
CHD9-203ENST00000447540 SPAG9O60271 1321 aaKnown RBP3.44□□□□□ -1.86
CHD9-203ENST00000447540 NCOA2Q15596 1464 aa3.44□□□□□ -1.86
CHD9-203ENST00000447540 CCDC170Q8IYT3 715 aa3.44□□□□□ -1.86
CHD9-203ENST00000447540 NAT10Q9H0A0 1025 aaKnown RBP3.44□□□□□ -1.86
CHD9-203ENST00000447540 CCDC192P0DO97 292 aa3.44□□□□□ -1.86
CHD9-203ENST00000447540 RAB3GAP1Q15042 981 aa3.44□□□□□ -1.86
CHD9-203ENST00000447540 PTPN14Q15678 1187 aa3.44□□□□□ -1.86
CHD9-203ENST00000447540 EGFL6Q8IUX8 553 aa3.44□□□□□ -1.86
CHD9-203ENST00000447540 PNISRQ8TF01 805 aaKnown RBP3.44□□□□□ -1.86
CHD9-203ENST00000447540 IQCGQ9H095 443 aaKnown RBP3.44□□□□□ -1.86
CHD9-203ENST00000447540 NPC1L1Q9UHC9 1359 aa3.44□□□□□ -1.86
CHD9-203ENST00000447540 SLC8A1P32418 973 aa3.44□□□□□ -1.86
CHD9-203ENST00000447540 P3H4Q92791 437 aa3.44□□□□□ -1.86
CHD9-203ENST00000447540 CENPHQ9H3R5 247 aa3.44□□□□□ -1.86
CHD9-203ENST00000447540 ARFGAP3Q9NP61 516 aa3.44□□□□□ -1.86
CHD9-203ENST00000447540 CRYMQ14894 314 aa3.44□□□□□ -1.86
CHD9-203ENST00000447540 SDCCAG8Q86SQ7 713 aaPredicted RBP3.44□□□□□ -1.86
CHD9-203ENST00000447540 DRC7Q8IY82 874 aa3.44□□□□□ -1.86
CHD9-203ENST00000447540 SHTN1A0MZ66 631 aa3.44□□□□□ -1.86
CHD9-203ENST00000447540 PLEKHD1A6NEE1 506 aa3.44□□□□□ -1.86
CHD9-203ENST00000447540 OSBPL9Q96SU4 736 aa3.44□□□□□ -1.86
CHD9-203ENST00000447540 ARMC2Q8NEN0 867 aa3.44□□□□□ -1.86
CHD9-203ENST00000447540 RSRC1Q96IZ7 334 aaKnown RBP3.44□□□□□ -1.86
CHD9-203ENST00000447540 CXorf56Q9H5V9 222 aa3.44□□□□□ -1.86
CHD9-203ENST00000447540 TULP2O00295 520 aa3.44□□□□□ -1.86
CHD9-203ENST00000447540 SLU7O95391 586 aaKnown RBP3.44□□□□□ -1.86
CHD9-203ENST00000447540 MOV10L1Q9BXT6 1211 aaKnown RBP3.44□□□□□ -1.86
CHD9-203ENST00000447540 ERLIN2O94905 339 aa3.44□□□□□ -1.86
CHD9-203ENST00000447540 HSP90AB2PQ58FF8 381 aa3.44□□□□□ -1.86
CHD9-203ENST00000447540 KLHL10Q6JEL2 608 aa3.44□□□□□ -1.86
CHD9-203ENST00000447540 CTCFLQ8NI51 663 aaPredicted RBP3.44□□□□□ -1.86
CHD9-203ENST00000447540 TRIM6Q9C030 488 aaPredicted RBP3.44□□□□□ -1.86
CHD9-203ENST00000447540 A1CFQ9NQ94 594 aaKnown RBP3.44□□□□□ -1.86
CHD9-203ENST00000447540 SPTLC3Q9NUV7 552 aa3.44□□□□□ -1.86
CHD9-203ENST00000447540 ABCF2Q9UG63 623 aa3.44□□□□□ -1.86
CHD9-203ENST00000447540 TAX1BP1Q86VP1 789 aa3.44□□□□□ -1.86
CHD9-203ENST00000447540 EPB41L2O43491 1005 aaKnown RBP3.43□□□□□ -1.86
CHD9-203ENST00000447540 IFFO1Q0D2I5 559 aa3.43□□□□□ -1.86
CHD9-203ENST00000447540 FAM200AQ8TCP9 573 aa3.43□□□□□ -1.86
CHD9-203ENST00000447540 ZSCAN26Q16670 478 aa3.43□□□□□ -1.86
CHD9-203ENST00000447540 IQCEQ6IPM2 695 aa3.43□□□□□ -1.86
CHD9-203ENST00000447540 BRAPQ7Z569 592 aa3.43□□□□□ -1.86
CHD9-203ENST00000447540 RPUSD2Q8IZ73 545 aaKnown RBP3.43□□□□□ -1.86
CHD9-203ENST00000447540 CEP112Q8N8E3 955 aa3.43□□□□□ -1.86
CHD9-203ENST00000447540 EXOC6Q8TAG9 804 aa3.43□□□□□ -1.86
CHD9-203ENST00000447540 TEX13AQ9BXU3 409 aaPredicted RBP3.43□□□□□ -1.86
CHD9-203ENST00000447540 CLIP2Q9UDT6 1046 aa3.43□□□□□ -1.86
CHD9-203ENST00000447540 VIRMAQ69YN4 1812 aaKnown RBP3.43□□□□□ -1.86
CHD9-203ENST00000447540 CAMSAP2Q08AD1 1489 aa3.43□□□□□ -1.86
CHD9-203ENST00000447540 PTPRCP08575 1304 aa3.43□□□□□ -1.86
CHD9-203ENST00000447540 WDR33Q9C0J8 1336 aaKnown RBP3.43□□□□□ -1.86
CHD9-203ENST00000447540 K7ELQ4 463 aaPredicted RBP3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms