RNA–Protein interactions for RNA: ENST00000444396.5

NR1H3-212, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 3

Gene NR1H3, Length 784 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-212ENST00000444396 VPS72Q15906 364 aa25.64■■□□□ 1.7
NR1H3-212ENST00000444396 SMG6Q86US8 1419 aaKnown RBP25.63■■□□□ 1.69
NR1H3-212ENST00000444396 MORC1Q86VD1 984 aa25.62■■□□□ 1.69
NR1H3-212ENST00000444396 IP6K1Q92551 441 aa25.62■■□□□ 1.69
NR1H3-212ENST00000444396 QTRT2Q9H974 415 aaKnown RBP25.61■■□□□ 1.69
NR1H3-212ENST00000444396 DDX10Q13206 875 aaKnown RBP25.6■■□□□ 1.69
NR1H3-212ENST00000444396 POTEAQ6S8J7 498 aa25.6■■□□□ 1.69
NR1H3-212ENST00000444396 AXIN2Q9Y2T1 843 aa25.6■■□□□ 1.69
NR1H3-212ENST00000444396 FLT4P35916 1363 aa25.59■■□□□ 1.69
NR1H3-212ENST00000444396 CDK12Q9NYV4 1490 aaPredicted RBP25.59■■□□□ 1.69
NR1H3-212ENST00000444396 HOXC9P31274 260 aa25.58■■□□□ 1.69
NR1H3-212ENST00000444396 RBM6P78332 1123 aaKnown RBP25.58■■□□□ 1.69
NR1H3-212ENST00000444396 AMPHP49418 695 aa25.57■■□□□ 1.68
NR1H3-212ENST00000444396 RRS1Q15050 365 aaKnown RBP25.57■■□□□ 1.68
NR1H3-212ENST00000444396 GJD4Q96KN9 370 aaPredicted RBP25.57■■□□□ 1.68
NR1H3-212ENST00000444396 POLKQ9UBT6 870 aa25.57■■□□□ 1.68
NR1H3-212ENST00000444396 ERBB3P21860 1342 aa25.57■■□□□ 1.68
NR1H3-212ENST00000444396 WDR17Q8IZU2 1322 aa25.57■■□□□ 1.68
NR1H3-212ENST00000444396 PEAK1Q9H792 1746 aa25.57■■□□□ 1.68
NR1H3-212ENST00000444396 INSRP06213 1382 aa25.56■■□□□ 1.68
NR1H3-212ENST00000444396 MAP2P11137 1827 aaKnown RBP25.56■■□□□ 1.68
NR1H3-212ENST00000444396 ZBTB7CA1YPR0 619 aa25.56■■□□□ 1.68
NR1H3-212ENST00000444396 FBLN1P23142 703 aa25.56■■□□□ 1.68
NR1H3-212ENST00000444396 CC2D1BQ5T0F9 858 aaKnown RBP25.56■■□□□ 1.68
NR1H3-212ENST00000444396 SPATA31A5Q5VU36 1347 aa25.56■■□□□ 1.68
NR1H3-212ENST00000444396 SPATA31A7Q8IWB4 1347 aa25.56■■□□□ 1.68
NR1H3-212ENST00000444396 CRB1P82279 1406 aa25.55■■□□□ 1.68
NR1H3-212ENST00000444396 FAM208AQ9UK61 1670 aaKnown RBP25.55■■□□□ 1.68
NR1H3-212ENST00000444396 RGPD5Q99666 1765 aa25.55■■□□□ 1.68
NR1H3-212ENST00000444396 EVA1CP58658 441 aa25.55■■□□□ 1.68
NR1H3-212ENST00000444396 GLI3P10071 1580 aa25.55■■□□□ 1.68
NR1H3-212ENST00000444396 RXRBP28702 533 aa25.53■■□□□ 1.68
NR1H3-212ENST00000444396 EMILIN1Q9Y6C2 1016 aa25.53■■□□□ 1.68
NR1H3-212ENST00000444396 SPATA31A1Q5TZJ5 1347 aa25.53■■□□□ 1.68
NR1H3-212ENST00000444396 STRN4Q9NRL3 753 aa25.52■■□□□ 1.68
NR1H3-212ENST00000444396 LARP1Q6PKG0 1096 aaKnown RBP25.51■■□□□ 1.67
NR1H3-212ENST00000444396 THRAP3Q9Y2W1 955 aaKnown RBP25.51■■□□□ 1.67
NR1H3-212ENST00000444396 PARD3Q8TEW0 1356 aa25.51■■□□□ 1.67
NR1H3-212ENST00000444396 ONECUT3O60422 494 aaPredicted RBP25.5■■□□□ 1.67
NR1H3-212ENST00000444396 ANKRD24Q8TF21 1146 aa25.5■■□□□ 1.67
NR1H3-212ENST00000444396 TNNT2P45379 298 aaPredicted RBP25.49■■□□□ 1.67
NR1H3-212ENST00000444396 CARD10Q9BWT7 1032 aa25.49■■□□□ 1.67
NR1H3-212ENST00000444396 BARGINQ6ZT62 677 aa25.48■■□□□ 1.67
NR1H3-212ENST00000444396 HSP90AB2PQ58FF8 381 aa25.47■■□□□ 1.67
NR1H3-212ENST00000444396 TOM1L2Q6ZVM7 507 aa25.46■■□□□ 1.67
NR1H3-212ENST00000444396 CCDC9Q9Y3X0 531 aaKnown RBP25.46■■□□□ 1.67
NR1H3-212ENST00000444396 CSB-PGBD3P0DP91 1061 aa25.45■■□□□ 1.66
NR1H3-212ENST00000444396 RALBP1Q15311 655 aa25.45■■□□□ 1.66
NR1H3-212ENST00000444396 TCP11L2Q8N4U5 519 aa25.45■■□□□ 1.66
NR1H3-212ENST00000444396 THSD7AQ9UPZ6 1657 aa25.44■■□□□ 1.66
NR1H3-212ENST00000444396 RGS12O14924 1447 aa25.43■■□□□ 1.66
NR1H3-212ENST00000444396 NCAPD2Q15021 1401 aa25.43■■□□□ 1.66
NR1H3-212ENST00000444396 PPM1GO15355 546 aaPredicted RBP25.42■■□□□ 1.66
NR1H3-212ENST00000444396 MTHFSP49914 203 aa25.42■■□□□ 1.66
NR1H3-212ENST00000444396 CDCA7Q9BWT1 371 aaPredicted RBP25.42■■□□□ 1.66
NR1H3-212ENST00000444396 WNK3Q9BYP7 1800 aa25.4■■□□□ 1.66
NR1H3-212ENST00000444396 DISP2A7MBM2 1401 aa25.4■■□□□ 1.66
NR1H3-212ENST00000444396 PPP2R1AP30153 589 aa25.4■■□□□ 1.66
NR1H3-212ENST00000444396 NLRP2Q9NX02 1062 aa25.39■■□□□ 1.66
NR1H3-212ENST00000444396 PARP4Q9UKK3 1724 aaKnown RBP25.38■■□□□ 1.65
NR1H3-212ENST00000444396 COL3A1P02461 1466 aaPredicted RBP25.37■■□□□ 1.65
NR1H3-212ENST00000444396 PLEKHG2Q9H7P9 1386 aa25.37■■□□□ 1.65
NR1H3-212ENST00000444396 EIF4A2Q14240 407 aaKnown RBP25.37■■□□□ 1.65
NR1H3-212ENST00000444396 FAM98CQ17RN3 349 aaKnown RBP25.37■■□□□ 1.65
NR1H3-212ENST00000444396 LTV1Q96GA3 475 aaPredicted RBP25.37■■□□□ 1.65
NR1H3-212ENST00000444396 USP35Q9P2H5 1018 aa25.36■■□□□ 1.65
NR1H3-212ENST00000444396 NBPF6Q5VWK0 638 aa25.35■■□□□ 1.65
NR1H3-212ENST00000444396 SEPT12Q8IYM1 358 aa25.35■■□□□ 1.65
NR1H3-212ENST00000444396 NBPF4Q96M43 638 aa25.35■■□□□ 1.65
NR1H3-212ENST00000444396 PRKRIP1Q9H875 184 aaPredicted RBP25.35■■□□□ 1.65
NR1H3-212ENST00000444396 CNGB1Q14028 1251 aaPredicted RBP25.34■■□□□ 1.65
NR1H3-212ENST00000444396 RGPD1P0DJD0 1748 aa25.34■■□□□ 1.65
NR1H3-212ENST00000444396 IGSF1Q8N6C5 1336 aa25.34■■□□□ 1.65
NR1H3-212ENST00000444396 RGPD2P0DJD1 1756 aa25.33■■□□□ 1.65
NR1H3-212ENST00000444396 IL13P35225 146 aa25.33■■□□□ 1.65
NR1H3-212ENST00000444396 CFAP53Q96M91 514 aa25.33■■□□□ 1.65
NR1H3-212ENST00000444396 MYBBP1AQ9BQG0 1328 aaKnown RBP25.33■■□□□ 1.64
NR1H3-212ENST00000444396 ILDR2Q71H61 639 aa25.32■■□□□ 1.64
NR1H3-212ENST00000444396 EYA1Q99502 592 aa25.32■■□□□ 1.64
NR1H3-212ENST00000444396 IL2RBP14784 551 aa25.31■■□□□ 1.64
NR1H3-212ENST00000444396 LRRC37A3O60309 1634 aa25.3■■□□□ 1.64
NR1H3-212ENST00000444396 DIAPH1O60610 1272 aaKnown RBP25.3■■□□□ 1.64
NR1H3-212ENST00000444396 KDRP35968 1356 aa25.29■■□□□ 1.64
NR1H3-212ENST00000444396 BRWD3Q6RI45 1802 aa25.28■■□□□ 1.64
NR1H3-212ENST00000444396 OVOS2A0A0G2JMS6 1433 aa25.28■■□□□ 1.64
NR1H3-212ENST00000444396 TNS2Q63HR2 1409 aa25.28■■□□□ 1.64
NR1H3-212ENST00000444396 MEGF6O75095 1541 aa25.26■■□□□ 1.63
NR1H3-212ENST00000444396 A0A0G2JS52 829 aa25.25■■□□□ 1.63
NR1H3-212ENST00000444396 MYT1Q01538 1121 aa25.25■■□□□ 1.63
NR1H3-212ENST00000444396 DDB1Q16531 1140 aa25.25■■□□□ 1.63
NR1H3-212ENST00000444396 KRT27Q7Z3Y8 459 aa25.25■■□□□ 1.63
NR1H3-212ENST00000444396 RAPGEF4Q8WZA2 1011 aa25.25■■□□□ 1.63
NR1H3-212ENST00000444396 USHBP1Q8N6Y0 703 aa25.23■■□□□ 1.63
NR1H3-212ENST00000444396 BCL9O00512 1426 aa25.22■■□□□ 1.63
NR1H3-212ENST00000444396 EXOC5O00471 708 aa25.22■■□□□ 1.63
NR1H3-212ENST00000444396 ANP32CO43423 234 aa25.22■■□□□ 1.63
NR1H3-212ENST00000444396 TATP17735 454 aaPredicted RBP25.22■■□□□ 1.63
NR1H3-212ENST00000444396 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.22■■□□□ 1.63
NR1H3-212ENST00000444396 NUDCQ9Y266 331 aa25.22■■□□□ 1.63
NR1H3-212ENST00000444396 PDE3BQ13370 1112 aa25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms