RNA–Protein interactions for RNA: ENST00000444172.6

CIRBP-203, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-203ENST00000444172 RGS17Q9UGC6 210 aaPredicted RBP24.32■■□□□ 1.48
CIRBP-203ENST00000444172 EMILIN1Q9Y6C2 1016 aa24.32■■□□□ 1.48
CIRBP-203ENST00000444172 NWD2Q9ULI1 1742 aa24.32■■□□□ 1.48
CIRBP-203ENST00000444172 COL18A1P39060 1754 aa24.31■■□□□ 1.48
CIRBP-203ENST00000444172 QTRT2Q9H974 415 aaKnown RBP24.31■■□□□ 1.48
CIRBP-203ENST00000444172 BCL9LQ86UU0 1499 aa24.31■■□□□ 1.48
CIRBP-203ENST00000444172 CAMTA1Q9Y6Y1 1673 aa24.3■■□□□ 1.48
CIRBP-203ENST00000444172 IP6K1Q92551 441 aa24.3■■□□□ 1.48
CIRBP-203ENST00000444172 POLKQ9UBT6 870 aa24.3■■□□□ 1.48
CIRBP-203ENST00000444172 LMO7Q8WWI1 1683 aa24.3■■□□□ 1.48
CIRBP-203ENST00000444172 HOXC9P31274 260 aa24.29■■□□□ 1.48
CIRBP-203ENST00000444172 CCDC9Q9Y3X0 531 aaKnown RBP24.29■■□□□ 1.48
CIRBP-203ENST00000444172 TRPC5Q9UL62 973 aaPredicted RBP24.28■■□□□ 1.48
CIRBP-203ENST00000444172 CSB-PGBD3P0DP91 1061 aa24.27■■□□□ 1.48
CIRBP-203ENST00000444172 LTV1Q96GA3 475 aaPredicted RBP24.27■■□□□ 1.48
CIRBP-203ENST00000444172 NRAPQ86VF7 1730 aa24.26■■□□□ 1.47
CIRBP-203ENST00000444172 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.26■■□□□ 1.47
CIRBP-203ENST00000444172 POTEAQ6S8J7 498 aa24.25■■□□□ 1.47
CIRBP-203ENST00000444172 PEAK1Q9H792 1746 aa24.24■■□□□ 1.47
CIRBP-203ENST00000444172 HSP90AB2PQ58FF8 381 aa24.24■■□□□ 1.47
CIRBP-203ENST00000444172 LARP1Q6PKG0 1096 aaKnown RBP24.24■■□□□ 1.47
CIRBP-203ENST00000444172 ANKRD24Q8TF21 1146 aa24.24■■□□□ 1.47
CIRBP-203ENST00000444172 RTL1A6NKG5 1358 aa24.24■■□□□ 1.47
CIRBP-203ENST00000444172 FLT4P35916 1363 aa24.24■■□□□ 1.47
CIRBP-203ENST00000444172 COL5A2P05997 1499 aaPredicted RBP24.24■■□□□ 1.47
CIRBP-203ENST00000444172 ABCC6O95255 1503 aa24.24■■□□□ 1.47
CIRBP-203ENST00000444172 VPS72Q15906 364 aa24.23■■□□□ 1.47
CIRBP-203ENST00000444172 TOM1L2Q6ZVM7 507 aa24.23■■□□□ 1.47
CIRBP-203ENST00000444172 BLMP54132 1417 aaPredicted RBP24.23■■□□□ 1.47
CIRBP-203ENST00000444172 MTHFSP49914 203 aa24.22■■□□□ 1.47
CIRBP-203ENST00000444172 USP35Q9P2H5 1018 aa24.22■■□□□ 1.47
CIRBP-203ENST00000444172 ATRNO75882 1429 aa24.21■■□□□ 1.47
CIRBP-203ENST00000444172 KIF24Q5T7B8 1368 aa24.21■■□□□ 1.47
CIRBP-203ENST00000444172 RALBP1Q15311 655 aa24.21■■□□□ 1.47
CIRBP-203ENST00000444172 GJD4Q96KN9 370 aaPredicted RBP24.21■■□□□ 1.47
CIRBP-203ENST00000444172 WDR17Q8IZU2 1322 aa24.2■■□□□ 1.46
CIRBP-203ENST00000444172 PPP2R1AP30153 589 aa24.2■■□□□ 1.46
CIRBP-203ENST00000444172 INSRP06213 1382 aa24.19■■□□□ 1.46
CIRBP-203ENST00000444172 PARD3Q8TEW0 1356 aa24.19■■□□□ 1.46
CIRBP-203ENST00000444172 ERBB3P21860 1342 aa24.19■■□□□ 1.46
CIRBP-203ENST00000444172 RXRBP28702 533 aa24.19■■□□□ 1.46
CIRBP-203ENST00000444172 NLRP2Q9NX02 1062 aa24.18■■□□□ 1.46
CIRBP-203ENST00000444172 SPATA31A5Q5VU36 1347 aa24.17■■□□□ 1.46
CIRBP-203ENST00000444172 SPATA31A7Q8IWB4 1347 aa24.17■■□□□ 1.46
CIRBP-203ENST00000444172 RBM6P78332 1123 aaKnown RBP24.17■■□□□ 1.46
CIRBP-203ENST00000444172 CRB1P82279 1406 aa24.17■■□□□ 1.46
CIRBP-203ENST00000444172 SMG6Q86US8 1419 aaKnown RBP24.17■■□□□ 1.46
CIRBP-203ENST00000444172 SPATA31A1Q5TZJ5 1347 aa24.15■■□□□ 1.46
CIRBP-203ENST00000444172 PRKRIP1Q9H875 184 aaPredicted RBP24.15■■□□□ 1.46
CIRBP-203ENST00000444172 ANP32CO43423 234 aa24.14■■□□□ 1.45
CIRBP-203ENST00000444172 RGPD2P0DJD1 1756 aa24.14■■□□□ 1.45
CIRBP-203ENST00000444172 CDK12Q9NYV4 1490 aaPredicted RBP24.13■■□□□ 1.45
CIRBP-203ENST00000444172 EIF4A2Q14240 407 aaKnown RBP24.13■■□□□ 1.45
CIRBP-203ENST00000444172 CARD10Q9BWT7 1032 aa24.13■■□□□ 1.45
CIRBP-203ENST00000444172 A0A0G2JS52 829 aa24.12■■□□□ 1.45
CIRBP-203ENST00000444172 MYT1Q01538 1121 aa24.12■■□□□ 1.45
CIRBP-203ENST00000444172 FAM98CQ17RN3 349 aaKnown RBP24.12■■□□□ 1.45
CIRBP-203ENST00000444172 TCP11L2Q8N4U5 519 aa24.12■■□□□ 1.45
CIRBP-203ENST00000444172 CFAP53Q96M91 514 aa24.12■■□□□ 1.45
CIRBP-203ENST00000444172 GLI3P10071 1580 aa24.12■■□□□ 1.45
CIRBP-203ENST00000444172 MYBBP1AQ9BQG0 1328 aaKnown RBP24.1■■□□□ 1.45
CIRBP-203ENST00000444172 NBPF6Q5VWK0 638 aa24.1■■□□□ 1.45
CIRBP-203ENST00000444172 USHBP1Q8N6Y0 703 aa24.1■■□□□ 1.45
CIRBP-203ENST00000444172 NBPF4Q96M43 638 aa24.1■■□□□ 1.45
CIRBP-203ENST00000444172 THRAP3Q9Y2W1 955 aaKnown RBP24.1■■□□□ 1.45
CIRBP-203ENST00000444172 FAM208AQ9UK61 1670 aaKnown RBP24.1■■□□□ 1.45
CIRBP-203ENST00000444172 DIAPH1O60610 1272 aaKnown RBP24.08■■□□□ 1.45
CIRBP-203ENST00000444172 EYA1Q99502 592 aa24.07■■□□□ 1.44
CIRBP-203ENST00000444172 IL13P35225 146 aa24.06■■□□□ 1.44
CIRBP-203ENST00000444172 BARGINQ6ZT62 677 aa24.06■■□□□ 1.44
CIRBP-203ENST00000444172 SEPT12Q8IYM1 358 aa24.05■■□□□ 1.44
CIRBP-203ENST00000444172 U2SURPO15042 1029 aaKnown RBP24.03■■□□□ 1.44
CIRBP-203ENST00000444172 ONECUT3O60422 494 aaPredicted RBP24.03■■□□□ 1.44
CIRBP-203ENST00000444172 DIEXFQ68CQ4 756 aaKnown RBP24.03■■□□□ 1.44
CIRBP-203ENST00000444172 IL2RBP14784 551 aa24.02■■□□□ 1.44
CIRBP-203ENST00000444172 NUDCQ9Y266 331 aa24.01■■□□□ 1.43
CIRBP-203ENST00000444172 COL3A1P02461 1466 aaPredicted RBP24■■□□□ 1.43
CIRBP-203ENST00000444172 RAPGEF4Q8WZA2 1011 aa24■■□□□ 1.43
CIRBP-203ENST00000444172 CDCA7Q9BWT1 371 aaPredicted RBP24■■□□□ 1.43
CIRBP-203ENST00000444172 WNK3Q9BYP7 1800 aa24■■□□□ 1.43
CIRBP-203ENST00000444172 RGS12O14924 1447 aa24■■□□□ 1.43
CIRBP-203ENST00000444172 SULT6B1Q6IMI4 303 aa23.99■■□□□ 1.43
CIRBP-203ENST00000444172 IGSF1Q8N6C5 1336 aa23.99■■□□□ 1.43
CIRBP-203ENST00000444172 TATP17735 454 aaPredicted RBP23.98■■□□□ 1.43
CIRBP-203ENST00000444172 HMOX1P09601 288 aa23.97■■□□□ 1.43
CIRBP-203ENST00000444172 DDB1Q16531 1140 aa23.97■■□□□ 1.43
CIRBP-203ENST00000444172 BRWD3Q6RI45 1802 aa23.96■■□□□ 1.43
CIRBP-203ENST00000444172 THSD7AQ9UPZ6 1657 aa23.96■■□□□ 1.43
CIRBP-203ENST00000444172 EXOC5O00471 708 aa23.96■■□□□ 1.43
CIRBP-203ENST00000444172 ILDR2Q71H61 639 aa23.96■■□□□ 1.43
CIRBP-203ENST00000444172 AEBP1Q8IUX7 1158 aa23.96■■□□□ 1.43
CIRBP-203ENST00000444172 DISP2A7MBM2 1401 aa23.95■■□□□ 1.42
CIRBP-203ENST00000444172 PDE3BQ13370 1112 aa23.95■■□□□ 1.42
CIRBP-203ENST00000444172 RGPD1P0DJD0 1748 aa23.95■■□□□ 1.42
CIRBP-203ENST00000444172 PARP4Q9UKK3 1724 aaKnown RBP23.94■■□□□ 1.42
CIRBP-203ENST00000444172 U2AF1L5P0DN76 240 aaPredicted RBP23.94■■□□□ 1.42
CIRBP-203ENST00000444172 U2AF1Q01081 240 aaKnown RBP eCLIP23.94■■□□□ 1.427e-7■■■■□ 23.3
CIRBP-203ENST00000444172 KRT27Q7Z3Y8 459 aa23.93■■□□□ 1.42
CIRBP-203ENST00000444172 MEGF6O75095 1541 aa23.93■■□□□ 1.42
CIRBP-203ENST00000444172 NCAPD2Q15021 1401 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms