RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 CBLBQ13191 982 aa7.72□□□□□ -1.17
HMGB3P9-201ENST00000441799 KRTAP4-6Q9BYQ5 205 aa7.72□□□□□ -1.17
HMGB3P9-201ENST00000441799 TIMELESSQ9UNS1 1208 aa7.72□□□□□ -1.17
HMGB3P9-201ENST00000441799 CLK2P49760 499 aaKnown RBP7.71□□□□□ -1.18
HMGB3P9-201ENST00000441799 PTSQ03393 145 aa7.71□□□□□ -1.18
HMGB3P9-201ENST00000441799 KCNMA1Q12791 1236 aa7.71□□□□□ -1.18
HMGB3P9-201ENST00000441799 PPP1R26Q5T8A7 1209 aaPredicted RBP7.71□□□□□ -1.18
HMGB3P9-201ENST00000441799 FBXO31Q5XUX0 539 aaPredicted RBP7.71□□□□□ -1.18
HMGB3P9-201ENST00000441799 Q6ZVU0 165 aa7.71□□□□□ -1.18
HMGB3P9-201ENST00000441799 HELBQ8NG08 1087 aaPredicted RBP7.71□□□□□ -1.18
HMGB3P9-201ENST00000441799 CARD14Q9BXL6 1004 aa7.71□□□□□ -1.18
HMGB3P9-201ENST00000441799 POLR3EQ9NVU0 708 aa7.71□□□□□ -1.18
HMGB3P9-201ENST00000441799 FIGNL2A6NMB9 653 aa7.7□□□□□ -1.18
HMGB3P9-201ENST00000441799 TTLL8A6PVC2 850 aa7.7□□□□□ -1.18
HMGB3P9-201ENST00000441799 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.7□□□□□ -1.18
HMGB3P9-201ENST00000441799 SLC24A3Q9HC58 644 aa7.7□□□□□ -1.18
HMGB3P9-201ENST00000441799 HOMEZQ8IX15 550 aa7.69□□□□□ -1.18
HMGB3P9-201ENST00000441799 GPKOWQ92917 476 aaPredicted RBP eCLIP7.69□□□□□ -1.18
HMGB3P9-201ENST00000441799 CNTNAP3BQ96NU0 1288 aa7.69□□□□□ -1.18
HMGB3P9-201ENST00000441799 CNTNAP3Q9BZ76 1288 aa7.69□□□□□ -1.18
HMGB3P9-201ENST00000441799 SPINT1O43278 529 aa7.68□□□□□ -1.18
HMGB3P9-201ENST00000441799 PDXDC2PQ6P474 469 aa7.68□□□□□ -1.18
HMGB3P9-201ENST00000441799 LRRN4Q8WUT4 740 aa7.68□□□□□ -1.18
HMGB3P9-201ENST00000441799 NANOS1Q8WY41 292 aaKnown RBP7.68□□□□□ -1.18
HMGB3P9-201ENST00000441799 OCSTAMPQ9BR26 566 aa7.68□□□□□ -1.18
HMGB3P9-201ENST00000441799 SLC35F4A4IF30 521 aa7.66□□□□□ -1.18
HMGB3P9-201ENST00000441799 RNFT1Q5M7Z0 435 aa7.66□□□□□ -1.18
HMGB3P9-201ENST00000441799 KCTD17Q8N5Z5 321 aa7.66□□□□□ -1.18
HMGB3P9-201ENST00000441799 CCDC155Q8N6L0 562 aa7.66□□□□□ -1.18
HMGB3P9-201ENST00000441799 KCTD15Q96SI1 283 aaPredicted RBP7.66□□□□□ -1.18
HMGB3P9-201ENST00000441799 COL25A1Q9BXS0 654 aaPredicted RBP7.66□□□□□ -1.18
HMGB3P9-201ENST00000441799 PGPEP1Q9NXJ5 209 aa7.66□□□□□ -1.18
HMGB3P9-201ENST00000441799 FKBPLQ9UIM3 349 aa7.66□□□□□ -1.18
HMGB3P9-201ENST00000441799 AGBL1Q96MI9 1066 aa7.65□□□□□ -1.18
HMGB3P9-201ENST00000441799 ARHGAP9Q9BRR9 750 aa7.65□□□□□ -1.18
HMGB3P9-201ENST00000441799 RSPH6AQ9H0K4 717 aa7.65□□□□□ -1.18
HMGB3P9-201ENST00000441799 ADAMTS8Q9UP79 889 aa7.65□□□□□ -1.18
HMGB3P9-201ENST00000441799 CTSOP43234 321 aaPredicted RBP7.64□□□□□ -1.19
HMGB3P9-201ENST00000441799 SUZ12Q15022 739 aaKnown RBP7.64□□□□□ -1.19
HMGB3P9-201ENST00000441799 NR6A1Q15406 480 aa7.64□□□□□ -1.19
HMGB3P9-201ENST00000441799 INTS6LQ5JSJ4 861 aaKnown RBP7.64□□□□□ -1.19
HMGB3P9-201ENST00000441799 ZNF385CQ66K41 422 aaPredicted RBP7.63□□□□□ -1.19
HMGB3P9-201ENST00000441799 PROCA1Q8NCQ7 364 aaPredicted RBP7.63□□□□□ -1.19
HMGB3P9-201ENST00000441799 RASSF7Q02833 373 aa7.62□□□□□ -1.19
HMGB3P9-201ENST00000441799 VWA5B2Q8N398 1253 aa7.62□□□□□ -1.19
HMGB3P9-201ENST00000441799 WHAMMQ8TF30 809 aa7.62□□□□□ -1.19
HMGB3P9-201ENST00000441799 INSM2Q96T92 566 aaPredicted RBP7.62□□□□□ -1.19
HMGB3P9-201ENST00000441799 RELBQ01201 579 aa7.61□□□□□ -1.19
HMGB3P9-201ENST00000441799 ZBTB33Q86T24 672 aa7.61□□□□□ -1.19
HMGB3P9-201ENST00000441799 TMEM151AQ8N4L1 468 aa7.61□□□□□ -1.19
HMGB3P9-201ENST00000441799 SLC10A4Q96EP9 437 aa7.61□□□□□ -1.19
HMGB3P9-201ENST00000441799 CDV3Q9UKY7 258 aaKnown RBP7.61□□□□□ -1.19
HMGB3P9-201ENST00000441799 GDF11O95390 407 aa7.6□□□□□ -1.19
HMGB3P9-201ENST00000441799 SLURP2P0DP57 97 aa7.6□□□□□ -1.19
HMGB3P9-201ENST00000441799 ITGA6P23229 1130 aa7.6□□□□□ -1.19
HMGB3P9-201ENST00000441799 DHX9Q08211 1270 aaKnown RBP7.6□□□□□ -1.19
HMGB3P9-201ENST00000441799 SKIV2LQ15477 1246 aaKnown RBP7.6□□□□□ -1.19
HMGB3P9-201ENST00000441799 PPP2R2DQ66LE6 453 aa7.6□□□□□ -1.19
HMGB3P9-201ENST00000441799 KDF1Q8NAX2 398 aaPredicted RBP7.6□□□□□ -1.19
HMGB3P9-201ENST00000441799 EPS8L1Q8TE68 723 aa7.6□□□□□ -1.19
HMGB3P9-201ENST00000441799 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.6□□□□□ -1.19
HMGB3P9-201ENST00000441799 ZNF395Q9H8N7 513 aaPredicted RBP7.6□□□□□ -1.19
HMGB3P9-201ENST00000441799 TMPRSS4Q9NRS4 437 aa7.6□□□□□ -1.19
HMGB3P9-201ENST00000441799 ZC3H4Q9UPT8 1303 aaKnown RBP7.59□□□□□ -1.19
HMGB3P9-201ENST00000441799 SENP3-EIF4A1A0A087X0R7 540 aa7.59□□□□□ -1.19
HMGB3P9-201ENST00000441799 ARHGEF15O94989 841 aa7.59□□□□□ -1.19
HMGB3P9-201ENST00000441799 ADD1P35611 737 aaKnown RBP7.59□□□□□ -1.19
HMGB3P9-201ENST00000441799 ADAM32Q8TC27 787 aa7.59□□□□□ -1.19
HMGB3P9-201ENST00000441799 LILRA1O75019 489 aa7.58□□□□□ -1.2
HMGB3P9-201ENST00000441799 PTK2Q05397 1052 aa7.58□□□□□ -1.2
HMGB3P9-201ENST00000441799 RNF217Q8TC41 542 aa7.58□□□□□ -1.2
HMGB3P9-201ENST00000441799 BCL11AQ9H165 835 aa7.58□□□□□ -1.2
HMGB3P9-201ENST00000441799 SH3D19Q5HYK7 790 aa7.57□□□□□ -1.2
HMGB3P9-201ENST00000441799 SV2AQ7L0J3 742 aa7.57□□□□□ -1.2
HMGB3P9-201ENST00000441799 GPSM3Q9Y4H4 160 aa7.57□□□□□ -1.2
HMGB3P9-201ENST00000441799 CDC14CA4D256 554 aa7.56□□□□□ -1.2
HMGB3P9-201ENST00000441799 FOXD4L5Q5VV16 416 aaPredicted RBP7.56□□□□□ -1.2
HMGB3P9-201ENST00000441799 ZNF784Q8NCA9 323 aaPredicted RBP7.56□□□□□ -1.2
HMGB3P9-201ENST00000441799 FAM117AQ9C073 453 aa7.56□□□□□ -1.2
HMGB3P9-201ENST00000441799 HMX1Q9NP08 348 aaPredicted RBP7.56□□□□□ -1.2
HMGB3P9-201ENST00000441799 POLMQ9NP87 494 aaPredicted RBP7.56□□□□□ -1.2
HMGB3P9-201ENST00000441799 ERVH48-1M5A8F1 160 aa7.55□□□□□ -1.2
HMGB3P9-201ENST00000441799 AP1G2O75843 785 aa7.55□□□□□ -1.2
HMGB3P9-201ENST00000441799 SVOPQ8N4V2 548 aa7.55□□□□□ -1.2
HMGB3P9-201ENST00000441799 CUEDC1Q9NWM3 386 aaPredicted RBP7.55□□□□□ -1.2
HMGB3P9-201ENST00000441799 ADH1AP07327 375 aa7.54□□□□□ -1.2
HMGB3P9-201ENST00000441799 PTGIRP43119 386 aa7.54□□□□□ -1.2
HMGB3P9-201ENST00000441799 GPBP1L1Q9HC44 474 aaPredicted RBP7.54□□□□□ -1.2
HMGB3P9-201ENST00000441799 ESPNB1AK53 854 aa7.53□□□□□ -1.2
HMGB3P9-201ENST00000441799 RAB15P59190 212 aa7.53□□□□□ -1.2
HMGB3P9-201ENST00000441799 GAS6Q14393 721 aa7.53□□□□□ -1.2
HMGB3P9-201ENST00000441799 LYPD4Q6UWN0 246 aa7.53□□□□□ -1.2
HMGB3P9-201ENST00000441799 KDM4CQ9H3R0 1056 aa7.53□□□□□ -1.2
HMGB3P9-201ENST00000441799 RNF225M0QZC1 329 aaPredicted RBP7.52□□□□□ -1.21
HMGB3P9-201ENST00000441799 ADAMTS2O95450 1211 aa7.52□□□□□ -1.21
HMGB3P9-201ENST00000441799 IRS1P35568 1242 aa7.52□□□□□ -1.21
HMGB3P9-201ENST00000441799 NBPF20Q3BBV1 942 aa7.52□□□□□ -1.21
HMGB3P9-201ENST00000441799 USP17L8P0C7I0 530 aa7.5□□□□□ -1.21
HMGB3P9-201ENST00000441799 DZIP3Q86Y13 1208 aaKnown RBP7.5□□□□□ -1.21
HMGB3P9-201ENST00000441799 SRSF11Q05519 484 aaKnown RBP7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms