RNA–Protein interactions for RNA: ENST00000438518.5

HDAC6-208, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-208ENST00000438518 IP6K1Q92551 441 aa24.83■■□□□ 1.57
HDAC6-208ENST00000438518 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.83■■□□□ 1.57
HDAC6-208ENST00000438518 INSRP06213 1382 aa24.82■■□□□ 1.56
HDAC6-208ENST00000438518 EMILIN1Q9Y6C2 1016 aa24.82■■□□□ 1.56
HDAC6-208ENST00000438518 SLIT2O94813 1529 aa24.81■■□□□ 1.56
HDAC6-208ENST00000438518 RGPD5Q99666 1765 aa24.81■■□□□ 1.56
HDAC6-208ENST00000438518 HOXC9P31274 260 aa24.81■■□□□ 1.56
HDAC6-208ENST00000438518 MTHFSP49914 203 aa24.81■■□□□ 1.56
HDAC6-208ENST00000438518 MEX3CQ5U5Q3 659 aaKnown RBP24.81■■□□□ 1.56
HDAC6-208ENST00000438518 NRAPQ86VF7 1730 aa24.81■■□□□ 1.56
HDAC6-208ENST00000438518 FBLN1P23142 703 aa24.8■■□□□ 1.56
HDAC6-208ENST00000438518 FAM83GA6ND36 823 aa24.79■■□□□ 1.56
HDAC6-208ENST00000438518 CFAP53Q96M91 514 aa24.79■■□□□ 1.56
HDAC6-208ENST00000438518 CAMTA1Q9Y6Y1 1673 aa24.78■■□□□ 1.56
HDAC6-208ENST00000438518 ZBTB7CA1YPR0 619 aa24.78■■□□□ 1.56
HDAC6-208ENST00000438518 COL5A2P05997 1499 aaPredicted RBP24.77■■□□□ 1.56
HDAC6-208ENST00000438518 PPM1GO15355 546 aaPredicted RBP24.77■■□□□ 1.56
HDAC6-208ENST00000438518 CHRNA2Q15822 529 aa24.77■■□□□ 1.56
HDAC6-208ENST00000438518 FNBP4Q8N3X1 1017 aaPredicted RBP24.77■■□□□ 1.56
HDAC6-208ENST00000438518 C8orf37Q96NL8 207 aa24.76■■□□□ 1.55
HDAC6-208ENST00000438518 NGLY1Q96IV0 654 aa24.75■■□□□ 1.55
HDAC6-208ENST00000438518 COL3A1P02461 1466 aaPredicted RBP24.75■■□□□ 1.55
HDAC6-208ENST00000438518 BTG4Q9NY30 223 aa24.74■■□□□ 1.55
HDAC6-208ENST00000438518 ERBB3P21860 1342 aa24.74■■□□□ 1.55
HDAC6-208ENST00000438518 HSP90AB2PQ58FF8 381 aa24.73■■□□□ 1.55
HDAC6-208ENST00000438518 AXIN2Q9Y2T1 843 aa24.73■■□□□ 1.55
HDAC6-208ENST00000438518 BCL9LQ86UU0 1499 aa24.7■■□□□ 1.55
HDAC6-208ENST00000438518 WDR17Q8IZU2 1322 aa24.7■■□□□ 1.54
HDAC6-208ENST00000438518 DIAPH1O60610 1272 aaKnown RBP24.69■■□□□ 1.54
HDAC6-208ENST00000438518 EVA1CP58658 441 aa24.69■■□□□ 1.54
HDAC6-208ENST00000438518 UNC5CLQ8IV45 518 aa24.69■■□□□ 1.54
HDAC6-208ENST00000438518 ANKRD24Q8TF21 1146 aa24.69■■□□□ 1.54
HDAC6-208ENST00000438518 RGPD1P0DJD0 1748 aa24.69■■□□□ 1.54
HDAC6-208ENST00000438518 AFF2P51816 1311 aa24.68■■□□□ 1.54
HDAC6-208ENST00000438518 CCER2I3L3R5 266 aa24.68■■□□□ 1.54
HDAC6-208ENST00000438518 CRB1P82279 1406 aa24.68■■□□□ 1.54
HDAC6-208ENST00000438518 EIF4A2Q14240 407 aaKnown RBP24.67■■□□□ 1.54
HDAC6-208ENST00000438518 USP21Q9UK80 565 aa24.67■■□□□ 1.54
HDAC6-208ENST00000438518 NUDCQ9Y266 331 aa24.67■■□□□ 1.54
HDAC6-208ENST00000438518 CSB-PGBD3P0DP91 1061 aa24.65■■□□□ 1.54
HDAC6-208ENST00000438518 IL13P35225 146 aa24.65■■□□□ 1.54
HDAC6-208ENST00000438518 ZNF772Q68DY9 489 aaPredicted RBP24.65■■□□□ 1.54
HDAC6-208ENST00000438518 RGPD2P0DJD1 1756 aa24.65■■□□□ 1.54
HDAC6-208ENST00000438518 NCAPD2Q15021 1401 aa24.64■■□□□ 1.54
HDAC6-208ENST00000438518 STRN4Q9NRL3 753 aa24.64■■□□□ 1.54
HDAC6-208ENST00000438518 VPS72Q15906 364 aa24.63■■□□□ 1.53
HDAC6-208ENST00000438518 TOM1L2Q6ZVM7 507 aa24.62■■□□□ 1.53
HDAC6-208ENST00000438518 LTV1Q96GA3 475 aaPredicted RBP24.62■■□□□ 1.53
HDAC6-208ENST00000438518 CARD10Q9BWT7 1032 aa24.62■■□□□ 1.53
HDAC6-208ENST00000438518 MRS2Q9HD23 443 aa24.62■■□□□ 1.53
HDAC6-208ENST00000438518 TRPC5Q9UL62 973 aaPredicted RBP24.62■■□□□ 1.53
HDAC6-208ENST00000438518 PLEKHG2Q9H7P9 1386 aa24.62■■□□□ 1.53
HDAC6-208ENST00000438518 IGSF1Q8N6C5 1336 aa24.61■■□□□ 1.53
HDAC6-208ENST00000438518 ATRNO75882 1429 aa24.61■■□□□ 1.53
HDAC6-208ENST00000438518 WNK3Q9BYP7 1800 aa24.61■■□□□ 1.53
HDAC6-208ENST00000438518 LARP1Q6PKG0 1096 aaKnown RBP24.6■■□□□ 1.53
HDAC6-208ENST00000438518 MIER1Q8N108 512 aa24.6■■□□□ 1.53
HDAC6-208ENST00000438518 THRAP3Q9Y2W1 955 aaKnown RBP24.6■■□□□ 1.53
HDAC6-208ENST00000438518 NLRP2Q9NX02 1062 aa24.59■■□□□ 1.53
HDAC6-208ENST00000438518 KDRP35968 1356 aa24.58■■□□□ 1.53
HDAC6-208ENST00000438518 EYA1Q99502 592 aa24.58■■□□□ 1.53
HDAC6-208ENST00000438518 PHF23Q9BUL5 403 aaPredicted RBP24.58■■□□□ 1.53
HDAC6-208ENST00000438518 SPATA31A5Q5VU36 1347 aa24.58■■□□□ 1.52
HDAC6-208ENST00000438518 SPATA31A7Q8IWB4 1347 aa24.58■■□□□ 1.52
HDAC6-208ENST00000438518 PARP4Q9UKK3 1724 aaKnown RBP24.58■■□□□ 1.52
HDAC6-208ENST00000438518 NBPF6Q5VWK0 638 aa24.57■■□□□ 1.52
HDAC6-208ENST00000438518 NBPF4Q96M43 638 aa24.57■■□□□ 1.52
HDAC6-208ENST00000438518 SPATA31A1Q5TZJ5 1347 aa24.57■■□□□ 1.52
HDAC6-208ENST00000438518 WDR43Q15061 677 aaKnown RBP eCLIP24.56■■□□□ 1.52
HDAC6-208ENST00000438518 U2SURPO15042 1029 aaKnown RBP24.55■■□□□ 1.52
HDAC6-208ENST00000438518 TCP11L2Q8N4U5 519 aa24.54■■□□□ 1.52
HDAC6-208ENST00000438518 CDCA7Q9BWT1 371 aaPredicted RBP24.54■■□□□ 1.52
HDAC6-208ENST00000438518 PNNQ9H307 717 aaKnown RBP24.54■■□□□ 1.52
HDAC6-208ENST00000438518 CCDC9Q9Y3X0 531 aaKnown RBP24.54■■□□□ 1.52
HDAC6-208ENST00000438518 GLI3P10071 1580 aa24.54■■□□□ 1.52
HDAC6-208ENST00000438518 CCDC184Q52MB2 194 aa24.53■■□□□ 1.52
HDAC6-208ENST00000438518 BARGINQ6ZT62 677 aa24.53■■□□□ 1.52
HDAC6-208ENST00000438518 GJD4Q96KN9 370 aaPredicted RBP24.53■■□□□ 1.52
HDAC6-208ENST00000438518 U2AF1L5P0DN76 240 aaPredicted RBP24.52■■□□□ 1.52
HDAC6-208ENST00000438518 U2AF1Q01081 240 aaKnown RBP eCLIP24.52■■□□□ 1.52
HDAC6-208ENST00000438518 QTRT2Q9H974 415 aaKnown RBP24.52■■□□□ 1.52
HDAC6-208ENST00000438518 FCHSD2O94868 740 aa24.51■■□□□ 1.51
HDAC6-208ENST00000438518 PNISRQ8TF01 805 aaKnown RBP24.51■■□□□ 1.51
HDAC6-208ENST00000438518 SULT6B1Q6IMI4 303 aa24.5■■□□□ 1.51
HDAC6-208ENST00000438518 DISP2A7MBM2 1401 aa24.5■■□□□ 1.51
HDAC6-208ENST00000438518 RAPGEF4Q8WZA2 1011 aa24.49■■□□□ 1.51
HDAC6-208ENST00000438518 THSD7AQ9UPZ6 1657 aa24.49■■□□□ 1.51
HDAC6-208ENST00000438518 PKD1L3Q7Z443 1732 aa24.49■■□□□ 1.51
HDAC6-208ENST00000438518 IL2RBP14784 551 aa24.48■■□□□ 1.51
HDAC6-208ENST00000438518 RBM6P78332 1123 aaKnown RBP24.48■■□□□ 1.51
HDAC6-208ENST00000438518 USP35Q9P2H5 1018 aa24.48■■□□□ 1.51
HDAC6-208ENST00000438518 USHBP1Q8N6Y0 703 aa24.47■■□□□ 1.51
HDAC6-208ENST00000438518 RSPH6AQ9H0K4 717 aa24.47■■□□□ 1.51
HDAC6-208ENST00000438518 OVOS2A0A0G2JMS6 1433 aa24.46■■□□□ 1.51
HDAC6-208ENST00000438518 NEFMP07197 916 aa24.46■■□□□ 1.51
HDAC6-208ENST00000438518 TATP17735 454 aaPredicted RBP24.46■■□□□ 1.51
HDAC6-208ENST00000438518 RGS17Q9UGC6 210 aaPredicted RBP24.46■■□□□ 1.51
HDAC6-208ENST00000438518 MEGF6O75095 1541 aa24.45■■□□□ 1.51
HDAC6-208ENST00000438518 ONECUT3O60422 494 aaPredicted RBP24.45■■□□□ 1.5
HDAC6-208ENST00000438518 HMOX1P09601 288 aa24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms