RNA–Protein interactions for RNA: ENST00000435525.1

CTDSPL-204, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 371 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-204ENST00000435525 ZNF772Q68DY9 489 aaPredicted RBP22.28■■□□□ 1.16
CTDSPL-204ENST00000435525 FNBP4Q8N3X1 1017 aaPredicted RBP22.28■■□□□ 1.16
CTDSPL-204ENST00000435525 USP21Q9UK80 565 aa22.28■■□□□ 1.16
CTDSPL-204ENST00000435525 AFF2P51816 1311 aa22.28■■□□□ 1.16
CTDSPL-204ENST00000435525 CSB-PGBD3P0DP91 1061 aa22.27■■□□□ 1.16
CTDSPL-204ENST00000435525 PPP2R1AP30153 589 aa22.27■■□□□ 1.16
CTDSPL-204ENST00000435525 MTHFSP49914 203 aa22.27■■□□□ 1.16
CTDSPL-204ENST00000435525 BLMP54132 1417 aaPredicted RBP22.27■■□□□ 1.16
CTDSPL-204ENST00000435525 SMG6Q86US8 1419 aaKnown RBP22.27■■□□□ 1.16
CTDSPL-204ENST00000435525 MYBBP1AQ9BQG0 1328 aaKnown RBP22.27■■□□□ 1.16
CTDSPL-204ENST00000435525 MARF1Q9Y4F3 1742 aaKnown RBP22.26■■□□□ 1.15
CTDSPL-204ENST00000435525 UNC5CLQ8IV45 518 aa22.26■■□□□ 1.15
CTDSPL-204ENST00000435525 COL14A1Q05707 1796 aaKnown RBP22.25■■□□□ 1.15
CTDSPL-204ENST00000435525 STRN4Q9NRL3 753 aa22.25■■□□□ 1.15
CTDSPL-204ENST00000435525 INSRP06213 1382 aa22.24■■□□□ 1.15
CTDSPL-204ENST00000435525 ANKRD24Q8TF21 1146 aa22.23■■□□□ 1.15
CTDSPL-204ENST00000435525 CCDC9Q9Y3X0 531 aaKnown RBP22.23■■□□□ 1.15
CTDSPL-204ENST00000435525 SLIT2O94813 1529 aa22.22■■□□□ 1.15
CTDSPL-204ENST00000435525 AXIN2Q9Y2T1 843 aa22.22■■□□□ 1.15
CTDSPL-204ENST00000435525 HSP90AB2PQ58FF8 381 aa22.21■■□□□ 1.15
CTDSPL-204ENST00000435525 LTV1Q96GA3 475 aaPredicted RBP22.21■■□□□ 1.15
CTDSPL-204ENST00000435525 TRPC5Q9UL62 973 aaPredicted RBP22.21■■□□□ 1.15
CTDSPL-204ENST00000435525 CDK12Q9NYV4 1490 aaPredicted RBP22.21■■□□□ 1.15
CTDSPL-204ENST00000435525 TOM1L2Q6ZVM7 507 aa22.2■■□□□ 1.14
CTDSPL-204ENST00000435525 NUDCQ9Y266 331 aa22.2■■□□□ 1.14
CTDSPL-204ENST00000435525 ERBB3P21860 1342 aa22.19■■□□□ 1.14
CTDSPL-204ENST00000435525 WDR17Q8IZU2 1322 aa22.19■■□□□ 1.14
CTDSPL-204ENST00000435525 DIAPH1O60610 1272 aaKnown RBP22.18■■□□□ 1.14
CTDSPL-204ENST00000435525 VPS72Q15906 364 aa22.18■■□□□ 1.14
CTDSPL-204ENST00000435525 NLRP2Q9NX02 1062 aa22.18■■□□□ 1.14
CTDSPL-204ENST00000435525 CAMTA1Q9Y6Y1 1673 aa22.17■■□□□ 1.14
CTDSPL-204ENST00000435525 COL5A2P05997 1499 aaPredicted RBP22.17■■□□□ 1.14
CTDSPL-204ENST00000435525 QTRT2Q9H974 415 aaKnown RBP22.17■■□□□ 1.14
CTDSPL-204ENST00000435525 BCL9LQ86UU0 1499 aa22.16■■□□□ 1.14
CTDSPL-204ENST00000435525 LTN1O94822 1766 aa22.15■■□□□ 1.14
CTDSPL-204ENST00000435525 NWD2Q9ULI1 1742 aa22.15■■□□□ 1.14
CTDSPL-204ENST00000435525 LMO7Q8WWI1 1683 aa22.15■■□□□ 1.14
CTDSPL-204ENST00000435525 LARP1Q6PKG0 1096 aaKnown RBP22.15■■□□□ 1.14
CTDSPL-204ENST00000435525 CRB1P82279 1406 aa22.14■■□□□ 1.14
CTDSPL-204ENST00000435525 EIF4A2Q14240 407 aaKnown RBP22.14■■□□□ 1.13
CTDSPL-204ENST00000435525 CARD10Q9BWT7 1032 aa22.14■■□□□ 1.13
CTDSPL-204ENST00000435525 PLCH1Q4KWH8 1693 aa22.14■■□□□ 1.13
CTDSPL-204ENST00000435525 THRAP3Q9Y2W1 955 aaKnown RBP22.13■■□□□ 1.13
CTDSPL-204ENST00000435525 SPATA31A5Q5VU36 1347 aa22.11■■□□□ 1.13
CTDSPL-204ENST00000435525 SPATA31A7Q8IWB4 1347 aa22.11■■□□□ 1.13
CTDSPL-204ENST00000435525 MAP2P11137 1827 aaKnown RBP22.11■■□□□ 1.13
CTDSPL-204ENST00000435525 TCP11L2Q8N4U5 519 aa22.11■■□□□ 1.13
CTDSPL-204ENST00000435525 GJD4Q96KN9 370 aaPredicted RBP22.11■■□□□ 1.13
CTDSPL-204ENST00000435525 USP35Q9P2H5 1018 aa22.11■■□□□ 1.13
CTDSPL-204ENST00000435525 COL18A1P39060 1754 aa22.11■■□□□ 1.13
CTDSPL-204ENST00000435525 ATRNO75882 1429 aa22.11■■□□□ 1.13
CTDSPL-204ENST00000435525 U2SURPO15042 1029 aaKnown RBP22.1■■□□□ 1.13
CTDSPL-204ENST00000435525 IL13P35225 146 aa22.1■■□□□ 1.13
CTDSPL-204ENST00000435525 RBM6P78332 1123 aaKnown RBP22.1■■□□□ 1.13
CTDSPL-204ENST00000435525 PEAK1Q9H792 1746 aa22.1■■□□□ 1.13
CTDSPL-204ENST00000435525 SPATA31A1Q5TZJ5 1347 aa22.09■■□□□ 1.13
CTDSPL-204ENST00000435525 RXRBP28702 533 aa22.09■■□□□ 1.13
CTDSPL-204ENST00000435525 CDCA7Q9BWT1 371 aaPredicted RBP22.09■■□□□ 1.13
CTDSPL-204ENST00000435525 WDR43Q15061 677 aaKnown RBP eCLIP22.08■■□□□ 1.13
CTDSPL-204ENST00000435525 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.07■■□□□ 1.12
CTDSPL-204ENST00000435525 NBPF6Q5VWK0 638 aa22.07■■□□□ 1.12
CTDSPL-204ENST00000435525 RAPGEF4Q8WZA2 1011 aa22.07■■□□□ 1.12
CTDSPL-204ENST00000435525 NBPF4Q96M43 638 aa22.07■■□□□ 1.12
CTDSPL-204ENST00000435525 EYA1Q99502 592 aa22.07■■□□□ 1.12
CTDSPL-204ENST00000435525 MRS2Q9HD23 443 aa22.07■■□□□ 1.12
CTDSPL-204ENST00000435525 A0A0G2JS52 829 aa22.06■■□□□ 1.12
CTDSPL-204ENST00000435525 MYT1Q01538 1121 aa22.06■■□□□ 1.12
CTDSPL-204ENST00000435525 BARGINQ6ZT62 677 aa22.06■■□□□ 1.12
CTDSPL-204ENST00000435525 PNNQ9H307 717 aaKnown RBP22.06■■□□□ 1.12
CTDSPL-204ENST00000435525 U2AF1L5P0DN76 240 aaPredicted RBP22.05■■□□□ 1.12
CTDSPL-204ENST00000435525 U2AF1Q01081 240 aaKnown RBP eCLIP22.05■■□□□ 1.12
CTDSPL-204ENST00000435525 NRAPQ86VF7 1730 aa22.05■■□□□ 1.12
CTDSPL-204ENST00000435525 IGSF1Q8N6C5 1336 aa22.05■■□□□ 1.12
CTDSPL-204ENST00000435525 CCER2I3L3R5 266 aa22.04■■□□□ 1.12
CTDSPL-204ENST00000435525 NEFMP07197 916 aa22.04■■□□□ 1.12
CTDSPL-204ENST00000435525 IL2RBP14784 551 aa22.04■■□□□ 1.12
CTDSPL-204ENST00000435525 RGS17Q9UGC6 210 aaPredicted RBP22.04■■□□□ 1.12
CTDSPL-204ENST00000435525 FAM208AQ9UK61 1670 aaKnown RBP22.04■■□□□ 1.12
CTDSPL-204ENST00000435525 TATP17735 454 aaPredicted RBP22.03■■□□□ 1.12
CTDSPL-204ENST00000435525 FAM98CQ17RN3 349 aaKnown RBP22.03■■□□□ 1.12
CTDSPL-204ENST00000435525 SULT6B1Q6IMI4 303 aa22.03■■□□□ 1.12
CTDSPL-204ENST00000435525 USHBP1Q8N6Y0 703 aa22.03■■□□□ 1.12
CTDSPL-204ENST00000435525 COL3A1P02461 1466 aaPredicted RBP22.03■■□□□ 1.12
CTDSPL-204ENST00000435525 POTEAQ6S8J7 498 aa22.01■■□□□ 1.11
CTDSPL-204ENST00000435525 FCHSD2O94868 740 aa21.99■■□□□ 1.11
CTDSPL-204ENST00000435525 RGPD5Q99666 1765 aa21.99■■□□□ 1.11
CTDSPL-204ENST00000435525 HMOX1P09601 288 aa21.98■■□□□ 1.11
CTDSPL-204ENST00000435525 MIER1Q8N108 512 aa21.98■■□□□ 1.11
CTDSPL-204ENST00000435525 PLEKHG2Q9H7P9 1386 aa21.98■■□□□ 1.11
CTDSPL-204ENST00000435525 EXOC5O00471 708 aa21.97■■□□□ 1.11
CTDSPL-204ENST00000435525 ONECUT3O60422 494 aaPredicted RBP21.97■■□□□ 1.11
CTDSPL-204ENST00000435525 SPG7Q9UQ90 795 aa21.97■■□□□ 1.11
CTDSPL-204ENST00000435525 DDB1Q16531 1140 aa21.96■■□□□ 1.11
CTDSPL-204ENST00000435525 AMOTQ4VCS5 1084 aa21.96■■□□□ 1.11
CTDSPL-204ENST00000435525 PLEKHO1Q53GL0 409 aaPredicted RBP21.96■■□□□ 1.11
CTDSPL-204ENST00000435525 SEPT12Q8IYM1 358 aa21.96■■□□□ 1.11
CTDSPL-204ENST00000435525 KDRP35968 1356 aa21.96■■□□□ 1.11
CTDSPL-204ENST00000435525 NCAPD2Q15021 1401 aa21.96■■□□□ 1.11
CTDSPL-204ENST00000435525 PDE3BQ13370 1112 aa21.95■■□□□ 1.1
CTDSPL-204ENST00000435525 AEBP1Q8IUX7 1158 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms