RNA–Protein interactions for RNA: ENST00000429595.1

PTPRK-211, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 3

Gene PTPRK, Length 558 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-211ENST00000429595 NPAS3Q8IXF0 933 aa12.16□□□□□ -0.46
PTPRK-211ENST00000429595 ARMC2Q8NEN0 867 aa12.16□□□□□ -0.46
PTPRK-211ENST00000429595 SLC16A10Q8TF71 515 aa12.16□□□□□ -0.46
PTPRK-211ENST00000429595 RSPH6AQ9H0K4 717 aa12.16□□□□□ -0.46
PTPRK-211ENST00000429595 STK17AQ9UEE5 414 aa12.16□□□□□ -0.46
PTPRK-211ENST00000429595 H3BM21 787 aa12.15□□□□□ -0.46
PTPRK-211ENST00000429595 GMPRP36959 345 aa12.15□□□□□ -0.46
PTPRK-211ENST00000429595 CTDSPL2Q05D32 466 aa12.15□□□□□ -0.46
PTPRK-211ENST00000429595 NBPF14Q5TI25 921 aa12.15□□□□□ -0.46
PTPRK-211ENST00000429595 ERBB4Q15303 1308 aa12.14□□□□□ -0.47
PTPRK-211ENST00000429595 FSHRP23945 695 aa12.13□□□□□ -0.47
PTPRK-211ENST00000429595 TRMT44Q8IYL2 757 aaKnown RBP12.13□□□□□ -0.47
PTPRK-211ENST00000429595 GPBP1L1Q9HC44 474 aaPredicted RBP12.13□□□□□ -0.47
PTPRK-211ENST00000429595 MAGEB6P1A0A0J9YX57 407 aa12.12□□□□□ -0.47
PTPRK-211ENST00000429595 MAP4K5Q9Y4K4 846 aa12.12□□□□□ -0.47
PTPRK-211ENST00000429595 LORP23490 312 aaPredicted RBP12.11□□□□□ -0.47
PTPRK-211ENST00000429595 C6orf118Q5T5N4 469 aa12.11□□□□□ -0.47
PTPRK-211ENST00000429595 LRRN4Q8WUT4 740 aa12.11□□□□□ -0.47
PTPRK-211ENST00000429595 IRF7Q92985 503 aa12.11□□□□□ -0.47
PTPRK-211ENST00000429595 ARAP1Q96P48 1450 aa12.1□□□□□ -0.47
PTPRK-211ENST00000429595 FANCD2Q9BXW9 1451 aa12.1□□□□□ -0.47
PTPRK-211ENST00000429595 MEIOBQ8N635 442 aa12.1□□□□□ -0.47
PTPRK-211ENST00000429595 CARD14Q9BXL6 1004 aa12.1□□□□□ -0.47
PTPRK-211ENST00000429595 VASH1Q7L8A9 365 aaPredicted RBP12.09□□□□□ -0.47
PTPRK-211ENST00000429595 PROCA1Q8NCQ7 364 aaPredicted RBP12.09□□□□□ -0.47
PTPRK-211ENST00000429595 FAM117AQ9C073 453 aa12.09□□□□□ -0.47
PTPRK-211ENST00000429595 KDM4CQ9H3R0 1056 aa12.09□□□□□ -0.47
PTPRK-211ENST00000429595 PEG3Q9GZU2 1588 aa12.09□□□□□ -0.47
PTPRK-211ENST00000429595 SKIV2LQ15477 1246 aaKnown RBP12.08□□□□□ -0.48
PTPRK-211ENST00000429595 ERFEQ4G0M1 354 aa12.08□□□□□ -0.48
PTPRK-211ENST00000429595 SH3D19Q5HYK7 790 aa12.08□□□□□ -0.48
PTPRK-211ENST00000429595 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.08□□□□□ -0.48
PTPRK-211ENST00000429595 LINC00528Q8N1L1 170 aa12.07□□□□□ -0.48
PTPRK-211ENST00000429595 GPKOWQ92917 476 aaPredicted RBP eCLIP12.07□□□□□ -0.48
PTPRK-211ENST00000429595 BMP2P12643 396 aa12.04□□□□□ -0.48
PTPRK-211ENST00000429595 NR6A1Q15406 480 aa12.04□□□□□ -0.48
PTPRK-211ENST00000429595 PPP2R2DQ66LE6 453 aa12.04□□□□□ -0.48
PTPRK-211ENST00000429595 CCDC116Q8IYX3 515 aa12.04□□□□□ -0.48
PTPRK-211ENST00000429595 FKBPLQ9UIM3 349 aa12.04□□□□□ -0.48
PTPRK-211ENST00000429595 PDXDC2PQ6P474 469 aa12.03□□□□□ -0.48
PTPRK-211ENST00000429595 OCSTAMPQ9BR26 566 aa12.03□□□□□ -0.48
PTPRK-211ENST00000429595 MAN1A2O60476 641 aa12.02□□□□□ -0.49
PTPRK-211ENST00000429595 EMILIN1Q9Y6C2 1016 aa12.02□□□□□ -0.49
PTPRK-211ENST00000429595 SOS2Q07890 1332 aaPredicted RBP12.02□□□□□ -0.49
PTPRK-211ENST00000429595 RSF1Q96T23 1441 aaPredicted RBP12.02□□□□□ -0.49
PTPRK-211ENST00000429595 VSIG8P0DPA2 414 aa12.01□□□□□ -0.49
PTPRK-211ENST00000429595 DDRGK1Q96HY6 314 aa12.01□□□□□ -0.49
PTPRK-211ENST00000429595 ARHGAP9Q9BRR9 750 aa12.01□□□□□ -0.49
PTPRK-211ENST00000429595 DNMT3LQ9UJW3 386 aa12.01□□□□□ -0.49
PTPRK-211ENST00000429595 ZSCAN1Q8NBB4 408 aa12□□□□□ -0.49
PTPRK-211ENST00000429595 UPP2O95045 317 aa11.99□□□□□ -0.49
PTPRK-211ENST00000429595 PPP1R26Q5T8A7 1209 aaPredicted RBP11.99□□□□□ -0.49
PTPRK-211ENST00000429595 URB2Q14146 1524 aaKnown RBP11.99□□□□□ -0.49
PTPRK-211ENST00000429595 ZNF608Q9ULD9 1512 aaPredicted RBP11.98□□□□□ -0.49
PTPRK-211ENST00000429595 IFT140Q96RY7 1462 aa11.98□□□□□ -0.49
PTPRK-211ENST00000429595 CBLBQ13191 982 aa11.98□□□□□ -0.49
PTPRK-211ENST00000429595 EPS8L1Q8TE68 723 aa11.98□□□□□ -0.49
PTPRK-211ENST00000429595 ZC3H4Q9UPT8 1303 aaKnown RBP11.97□□□□□ -0.49
PTPRK-211ENST00000429595 AP1G2O75843 785 aa11.97□□□□□ -0.49
PTPRK-211ENST00000429595 KCTD15Q96SI1 283 aaPredicted RBP11.97□□□□□ -0.49
PTPRK-211ENST00000429595 TSEN34Q9BSV6 310 aaKnown RBP11.97□□□□□ -0.49
PTPRK-211ENST00000429595 HMX1Q9NP08 348 aaPredicted RBP11.97□□□□□ -0.49
PTPRK-211ENST00000429595 PPFIA3O75145 1194 aa11.96□□□□□ -0.49
PTPRK-211ENST00000429595 Q6ZVU0 165 aa11.96□□□□□ -0.49
PTPRK-211ENST00000429595 SLC10A4Q96EP9 437 aa11.96□□□□□ -0.49
PTPRK-211ENST00000429595 MROH2BQ7Z745 1585 aa11.94□□□□□ -0.5
PTPRK-211ENST00000429595 INTS6LQ5JSJ4 861 aaKnown RBP11.94□□□□□ -0.5
PTPRK-211ENST00000429595 ZBTB33Q86T24 672 aa11.94□□□□□ -0.5
PTPRK-211ENST00000429595 PGPEP1Q9NXJ5 209 aa11.93□□□□□ -0.5
PTPRK-211ENST00000429595 ATP1B4Q9UN42 357 aaPredicted RBP11.93□□□□□ -0.5
PTPRK-211ENST00000429595 TTLL8A6PVC2 850 aa11.92□□□□□ -0.5
PTPRK-211ENST00000429595 USP17L8P0C7I0 530 aa11.92□□□□□ -0.5
PTPRK-211ENST00000429595 ADAM32Q8TC27 787 aa11.92□□□□□ -0.5
PTPRK-211ENST00000429595 CDV3Q9UKY7 258 aaKnown RBP11.92□□□□□ -0.5
PTPRK-211ENST00000429595 CFTRP13569 1480 aa11.91□□□□□ -0.5
PTPRK-211ENST00000429595 BCANQ96GW7 911 aa11.91□□□□□ -0.5
PTPRK-211ENST00000429595 CHD1O14646 1710 aa11.9□□□□□ -0.5
PTPRK-211ENST00000429595 SPINT1O43278 529 aa11.9□□□□□ -0.5
PTPRK-211ENST00000429595 PTK2Q05397 1052 aa11.9□□□□□ -0.5
PTPRK-211ENST00000429595 GPSM3Q9Y4H4 160 aa11.9□□□□□ -0.5
PTPRK-211ENST00000429595 FAM181BA6NEQ2 426 aa11.89□□□□□ -0.51
PTPRK-211ENST00000429595 FIGNL2A6NMB9 653 aa11.89□□□□□ -0.51
PTPRK-211ENST00000429595 AGBL1Q96MI9 1066 aa11.89□□□□□ -0.51
PTPRK-211ENST00000429595 RFC5P40937 340 aa11.88□□□□□ -0.51
PTPRK-211ENST00000429595 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.88□□□□□ -0.51
PTPRK-211ENST00000429595 PTSQ03393 145 aa11.87□□□□□ -0.51
PTPRK-211ENST00000429595 DHX9Q08211 1270 aaKnown RBP11.87□□□□□ -0.51
PTPRK-211ENST00000429595 GPR161Q8N6U8 529 aaKnown RBP11.86□□□□□ -0.51
PTPRK-211ENST00000429595 TMPRSS4Q9NRS4 437 aa11.86□□□□□ -0.51
PTPRK-211ENST00000429595 EIF4G3O43432 1585 aaKnown RBP11.85□□□□□ -0.51
PTPRK-211ENST00000429595 TRIM34Q9BYJ4 488 aa11.85□□□□□ -0.51
PTPRK-211ENST00000429595 CTSOP43234 321 aaPredicted RBP11.84□□□□□ -0.51
PTPRK-211ENST00000429595 RELBQ01201 579 aa11.84□□□□□ -0.51
PTPRK-211ENST00000429595 KRT76Q01546 638 aa11.84□□□□□ -0.51
PTPRK-211ENST00000429595 AQRO60306 1485 aaKnown RBP eCLIP11.83□□□□□ -0.52
PTPRK-211ENST00000429595 CHMP7Q8WUX9 453 aaPredicted RBP11.83□□□□□ -0.52
PTPRK-211ENST00000429595 INSM2Q96T92 566 aaPredicted RBP11.83□□□□□ -0.52
PTPRK-211ENST00000429595 RAB15P59190 212 aa11.82□□□□□ -0.52
PTPRK-211ENST00000429595 NBPF20Q3BBV1 942 aa11.82□□□□□ -0.52
PTPRK-211ENST00000429595 ZNF784Q8NCA9 323 aaPredicted RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms