RNA–Protein interactions for RNA: ENST00000419113.5

NDUFA3-206, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 3

Gene NDUFA3, Length 654 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-206ENST00000419113 IP6K1Q92551 441 aa22.15■■□□□ 1.14
NDUFA3-206ENST00000419113 FBLN1P23142 703 aa22.14■■□□□ 1.13
NDUFA3-206ENST00000419113 EMILIN1Q9Y6C2 1016 aa22.14■■□□□ 1.13
NDUFA3-206ENST00000419113 PEAK1Q9H792 1746 aa22.14■■□□□ 1.13
NDUFA3-206ENST00000419113 RGPD5Q99666 1765 aa22.13■■□□□ 1.13
NDUFA3-206ENST00000419113 FAM83GA6ND36 823 aa22.13■■□□□ 1.13
NDUFA3-206ENST00000419113 MTHFSP49914 203 aa22.13■■□□□ 1.13
NDUFA3-206ENST00000419113 PPM1GO15355 546 aaPredicted RBP22.12■■□□□ 1.13
NDUFA3-206ENST00000419113 HOXC9P31274 260 aa22.12■■□□□ 1.13
NDUFA3-206ENST00000419113 CHRNA2Q15822 529 aa22.12■■□□□ 1.13
NDUFA3-206ENST00000419113 CFAP53Q96M91 514 aa22.12■■□□□ 1.13
NDUFA3-206ENST00000419113 INSRP06213 1382 aa22.12■■□□□ 1.13
NDUFA3-206ENST00000419113 NGLY1Q96IV0 654 aa22.11■■□□□ 1.13
NDUFA3-206ENST00000419113 C8orf37Q96NL8 207 aa22.11■■□□□ 1.13
NDUFA3-206ENST00000419113 SLIT2O94813 1529 aa22.11■■□□□ 1.13
NDUFA3-206ENST00000419113 FAM208AQ9UK61 1670 aaKnown RBP22.11■■□□□ 1.13
NDUFA3-206ENST00000419113 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.1■■□□□ 1.13
NDUFA3-206ENST00000419113 CAMTA1Q9Y6Y1 1673 aa22.09■■□□□ 1.13
NDUFA3-206ENST00000419113 NRAPQ86VF7 1730 aa22.09■■□□□ 1.13
NDUFA3-206ENST00000419113 FNBP4Q8N3X1 1017 aaPredicted RBP22.08■■□□□ 1.13
NDUFA3-206ENST00000419113 BTG4Q9NY30 223 aa22.08■■□□□ 1.13
NDUFA3-206ENST00000419113 COL5A2P05997 1499 aaPredicted RBP22.07■■□□□ 1.12
NDUFA3-206ENST00000419113 EVA1CP58658 441 aa22.06■■□□□ 1.12
NDUFA3-206ENST00000419113 HSP90AB2PQ58FF8 381 aa22.06■■□□□ 1.12
NDUFA3-206ENST00000419113 AXIN2Q9Y2T1 843 aa22.06■■□□□ 1.12
NDUFA3-206ENST00000419113 ERBB3P21860 1342 aa22.05■■□□□ 1.12
NDUFA3-206ENST00000419113 UNC5CLQ8IV45 518 aa22.04■■□□□ 1.12
NDUFA3-206ENST00000419113 ANKRD24Q8TF21 1146 aa22.04■■□□□ 1.12
NDUFA3-206ENST00000419113 AFF2P51816 1311 aa22.04■■□□□ 1.12
NDUFA3-206ENST00000419113 USP21Q9UK80 565 aa22.03■■□□□ 1.12
NDUFA3-206ENST00000419113 WDR17Q8IZU2 1322 aa22.03■■□□□ 1.12
NDUFA3-206ENST00000419113 COL3A1P02461 1466 aaPredicted RBP22.03■■□□□ 1.12
NDUFA3-206ENST00000419113 DIAPH1O60610 1272 aaKnown RBP22.02■■□□□ 1.12
NDUFA3-206ENST00000419113 CSB-PGBD3P0DP91 1061 aa22.02■■□□□ 1.12
NDUFA3-206ENST00000419113 BCL9LQ86UU0 1499 aa22.02■■□□□ 1.12
NDUFA3-206ENST00000419113 ZNF772Q68DY9 489 aaPredicted RBP22.01■■□□□ 1.11
NDUFA3-206ENST00000419113 STRN4Q9NRL3 753 aa22.01■■□□□ 1.11
NDUFA3-206ENST00000419113 NUDCQ9Y266 331 aa22.01■■□□□ 1.11
NDUFA3-206ENST00000419113 CRB1P82279 1406 aa22■■□□□ 1.11
NDUFA3-206ENST00000419113 EIF4A2Q14240 407 aaKnown RBP22■■□□□ 1.11
NDUFA3-206ENST00000419113 CCER2I3L3R5 266 aa21.99■■□□□ 1.11
NDUFA3-206ENST00000419113 LTV1Q96GA3 475 aaPredicted RBP21.99■■□□□ 1.11
NDUFA3-206ENST00000419113 TOM1L2Q6ZVM7 507 aa21.98■■□□□ 1.11
NDUFA3-206ENST00000419113 RGPD2P0DJD1 1756 aa21.97■■□□□ 1.11
NDUFA3-206ENST00000419113 IL13P35225 146 aa21.97■■□□□ 1.11
NDUFA3-206ENST00000419113 VPS72Q15906 364 aa21.97■■□□□ 1.11
NDUFA3-206ENST00000419113 PHF23Q9BUL5 403 aaPredicted RBP21.97■■□□□ 1.11
NDUFA3-206ENST00000419113 TRPC5Q9UL62 973 aaPredicted RBP21.97■■□□□ 1.11
NDUFA3-206ENST00000419113 RGPD1P0DJD0 1748 aa21.97■■□□□ 1.11
NDUFA3-206ENST00000419113 CARD10Q9BWT7 1032 aa21.96■■□□□ 1.11
NDUFA3-206ENST00000419113 LARP1Q6PKG0 1096 aaKnown RBP21.95■■□□□ 1.1
NDUFA3-206ENST00000419113 MRS2Q9HD23 443 aa21.95■■□□□ 1.1
NDUFA3-206ENST00000419113 NLRP2Q9NX02 1062 aa21.95■■□□□ 1.1
NDUFA3-206ENST00000419113 ATRNO75882 1429 aa21.95■■□□□ 1.1
NDUFA3-206ENST00000419113 MIER1Q8N108 512 aa21.94■■□□□ 1.1
NDUFA3-206ENST00000419113 THRAP3Q9Y2W1 955 aaKnown RBP21.94■■□□□ 1.1
NDUFA3-206ENST00000419113 IGSF1Q8N6C5 1336 aa21.94■■□□□ 1.1
NDUFA3-206ENST00000419113 NCAPD2Q15021 1401 aa21.93■■□□□ 1.1
NDUFA3-206ENST00000419113 CCDC9Q9Y3X0 531 aaKnown RBP21.93■■□□□ 1.1
NDUFA3-206ENST00000419113 SPATA31A1Q5TZJ5 1347 aa21.92■■□□□ 1.1
NDUFA3-206ENST00000419113 SPATA31A5Q5VU36 1347 aa21.92■■□□□ 1.1
NDUFA3-206ENST00000419113 SPATA31A7Q8IWB4 1347 aa21.92■■□□□ 1.1
NDUFA3-206ENST00000419113 U2SURPO15042 1029 aaKnown RBP21.92■■□□□ 1.1
NDUFA3-206ENST00000419113 EYA1Q99502 592 aa21.92■■□□□ 1.1
NDUFA3-206ENST00000419113 WDR43Q15061 677 aaKnown RBP eCLIP21.91■■□□□ 1.1
NDUFA3-206ENST00000419113 NBPF6Q5VWK0 638 aa21.91■■□□□ 1.1
NDUFA3-206ENST00000419113 NBPF4Q96M43 638 aa21.91■■□□□ 1.1
NDUFA3-206ENST00000419113 QTRT2Q9H974 415 aaKnown RBP21.91■■□□□ 1.1
NDUFA3-206ENST00000419113 WNK3Q9BYP7 1800 aa21.91■■□□□ 1.1
NDUFA3-206ENST00000419113 PLEKHG2Q9H7P9 1386 aa21.9■■□□□ 1.1
NDUFA3-206ENST00000419113 TCP11L2Q8N4U5 519 aa21.9■■□□□ 1.1
NDUFA3-206ENST00000419113 GJD4Q96KN9 370 aaPredicted RBP21.89■■□□□ 1.09
NDUFA3-206ENST00000419113 CDCA7Q9BWT1 371 aaPredicted RBP21.89■■□□□ 1.09
NDUFA3-206ENST00000419113 PNNQ9H307 717 aaKnown RBP21.89■■□□□ 1.09
NDUFA3-206ENST00000419113 PARP4Q9UKK3 1724 aaKnown RBP21.89■■□□□ 1.09
NDUFA3-206ENST00000419113 KDRP35968 1356 aa21.88■■□□□ 1.09
NDUFA3-206ENST00000419113 U2AF1L5P0DN76 240 aaPredicted RBP21.88■■□□□ 1.09
NDUFA3-206ENST00000419113 U2AF1Q01081 240 aaKnown RBP eCLIP21.88■■□□□ 1.09
NDUFA3-206ENST00000419113 CCDC184Q52MB2 194 aa21.87■■□□□ 1.09
NDUFA3-206ENST00000419113 BARGINQ6ZT62 677 aa21.87■■□□□ 1.09
NDUFA3-206ENST00000419113 GLI3P10071 1580 aa21.87■■□□□ 1.09
NDUFA3-206ENST00000419113 SULT6B1Q6IMI4 303 aa21.86■■□□□ 1.09
NDUFA3-206ENST00000419113 RAPGEF4Q8WZA2 1011 aa21.86■■□□□ 1.09
NDUFA3-206ENST00000419113 USP35Q9P2H5 1018 aa21.86■■□□□ 1.09
NDUFA3-206ENST00000419113 FCHSD2O94868 740 aa21.85■■□□□ 1.09
NDUFA3-206ENST00000419113 RBM6P78332 1123 aaKnown RBP21.85■■□□□ 1.09
NDUFA3-206ENST00000419113 IL2RBP14784 551 aa21.84■■□□□ 1.09
NDUFA3-206ENST00000419113 USHBP1Q8N6Y0 703 aa21.84■■□□□ 1.09
NDUFA3-206ENST00000419113 PNISRQ8TF01 805 aaKnown RBP21.84■■□□□ 1.09
NDUFA3-206ENST00000419113 NEFMP07197 916 aa21.83■■□□□ 1.09
NDUFA3-206ENST00000419113 TATP17735 454 aaPredicted RBP21.83■■□□□ 1.09
NDUFA3-206ENST00000419113 RGS17Q9UGC6 210 aaPredicted RBP21.83■■□□□ 1.09
NDUFA3-206ENST00000419113 DISP2A7MBM2 1401 aa21.82■■□□□ 1.08
NDUFA3-206ENST00000419113 HMOX1P09601 288 aa21.82■■□□□ 1.08
NDUFA3-206ENST00000419113 RXRBP28702 533 aa21.81■■□□□ 1.08
NDUFA3-206ENST00000419113 RSPH6AQ9H0K4 717 aa21.81■■□□□ 1.08
NDUFA3-206ENST00000419113 THSD7AQ9UPZ6 1657 aa21.81■■□□□ 1.08
NDUFA3-206ENST00000419113 AEBP1Q8IUX7 1158 aa21.8■■□□□ 1.08
NDUFA3-206ENST00000419113 PKD1L3Q7Z443 1732 aa21.8■■□□□ 1.08
NDUFA3-206ENST00000419113 OVOS2A0A0G2JMS6 1433 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms