RNA–Protein interactions for RNA: ENST00000415669.3

SAPCD1-208, Transcript of suppressor APC domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SAPCD1, Length 916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAPCD1-208ENST00000415669 FAM208AQ9UK61 1670 aaKnown RBP19.58■□□□□ 0.72
SAPCD1-208ENST00000415669 CCDC9Q9Y3X0 531 aaKnown RBP19.57■□□□□ 0.72
SAPCD1-208ENST00000415669 WNK3Q9BYP7 1800 aa19.57■□□□□ 0.72
SAPCD1-208ENST00000415669 FBLN1P23142 703 aa19.56■□□□□ 0.72
SAPCD1-208ENST00000415669 MAP3K19Q56UN5 1328 aa19.55■□□□□ 0.72
SAPCD1-208ENST00000415669 PER1O15534 1290 aaPredicted RBP19.55■□□□□ 0.72
SAPCD1-208ENST00000415669 RRS1Q15050 365 aaKnown RBP19.55■□□□□ 0.72
SAPCD1-208ENST00000415669 AMER1Q5JTC6 1135 aaPredicted RBP19.55■□□□□ 0.72
SAPCD1-208ENST00000415669 RGPD2P0DJD1 1756 aa19.55■□□□□ 0.72
SAPCD1-208ENST00000415669 TNNT2P45379 298 aaPredicted RBP19.54■□□□□ 0.72
SAPCD1-208ENST00000415669 EVA1CP58658 441 aa19.54■□□□□ 0.72
SAPCD1-208ENST00000415669 VPS72Q15906 364 aa19.54■□□□□ 0.72
SAPCD1-208ENST00000415669 RTL1A6NKG5 1358 aa19.54■□□□□ 0.72
SAPCD1-208ENST00000415669 BLMP54132 1417 aaPredicted RBP19.53■□□□□ 0.72
SAPCD1-208ENST00000415669 RXRBP28702 533 aa19.53■□□□□ 0.72
SAPCD1-208ENST00000415669 RBM6P78332 1123 aaKnown RBP19.53■□□□□ 0.72
SAPCD1-208ENST00000415669 CNGB1Q14028 1251 aaPredicted RBP19.53■□□□□ 0.72
SAPCD1-208ENST00000415669 CC2D1BQ5T0F9 858 aaKnown RBP19.53■□□□□ 0.72
SAPCD1-208ENST00000415669 MORC1Q86VD1 984 aa19.53■□□□□ 0.72
SAPCD1-208ENST00000415669 AXIN2Q9Y2T1 843 aa19.53■□□□□ 0.72
SAPCD1-208ENST00000415669 AMPHP49418 695 aa19.52■□□□□ 0.72
SAPCD1-208ENST00000415669 GJD4Q96KN9 370 aaPredicted RBP19.52■□□□□ 0.72
SAPCD1-208ENST00000415669 NPC1L1Q9UHC9 1359 aa19.51■□□□□ 0.71
SAPCD1-208ENST00000415669 BRWD3Q6RI45 1802 aa19.51■□□□□ 0.71
SAPCD1-208ENST00000415669 RGS12O14924 1447 aa19.51■□□□□ 0.71
SAPCD1-208ENST00000415669 CRB1P82279 1406 aa19.51■□□□□ 0.71
SAPCD1-208ENST00000415669 CDK12Q9NYV4 1490 aaPredicted RBP19.5■□□□□ 0.71
SAPCD1-208ENST00000415669 FLT4P35916 1363 aa19.5■□□□□ 0.71
SAPCD1-208ENST00000415669 HOXC9P31274 260 aa19.5■□□□□ 0.71
SAPCD1-208ENST00000415669 DDX10Q13206 875 aaKnown RBP19.5■□□□□ 0.71
SAPCD1-208ENST00000415669 LARP1Q6PKG0 1096 aaKnown RBP19.5■□□□□ 0.71
SAPCD1-208ENST00000415669 ZNF316A6NFI3 1004 aaPredicted RBP19.49■□□□□ 0.71
SAPCD1-208ENST00000415669 CSB-PGBD3P0DP91 1061 aa19.49■□□□□ 0.71
SAPCD1-208ENST00000415669 IP6K1Q92551 441 aa19.49■□□□□ 0.71
SAPCD1-208ENST00000415669 EMILIN1Q9Y6C2 1016 aa19.49■□□□□ 0.71
SAPCD1-208ENST00000415669 THSD7AQ9UPZ6 1657 aa19.49■□□□□ 0.71
SAPCD1-208ENST00000415669 ERBB3P21860 1342 aa19.49■□□□□ 0.71
SAPCD1-208ENST00000415669 SPATA31A5Q5VU36 1347 aa19.49■□□□□ 0.71
SAPCD1-208ENST00000415669 SPATA31A7Q8IWB4 1347 aa19.49■□□□□ 0.71
SAPCD1-208ENST00000415669 WDR17Q8IZU2 1322 aa19.49■□□□□ 0.71
SAPCD1-208ENST00000415669 KIF24Q5T7B8 1368 aa19.48■□□□□ 0.71
SAPCD1-208ENST00000415669 PPM1GO15355 546 aaPredicted RBP19.48■□□□□ 0.71
SAPCD1-208ENST00000415669 ILDR2Q71H61 639 aa19.48■□□□□ 0.71
SAPCD1-208ENST00000415669 USP35Q9P2H5 1018 aa19.48■□□□□ 0.71
SAPCD1-208ENST00000415669 SMG6Q86US8 1419 aaKnown RBP19.48■□□□□ 0.71
SAPCD1-208ENST00000415669 TOM1L2Q6ZVM7 507 aa19.47■□□□□ 0.71
SAPCD1-208ENST00000415669 SPATA31A1Q5TZJ5 1347 aa19.47■□□□□ 0.71
SAPCD1-208ENST00000415669 ANKRD24Q8TF21 1146 aa19.46■□□□□ 0.71
SAPCD1-208ENST00000415669 LTV1Q96GA3 475 aaPredicted RBP19.46■□□□□ 0.71
SAPCD1-208ENST00000415669 PARP4Q9UKK3 1724 aaKnown RBP19.45■□□□□ 0.7
SAPCD1-208ENST00000415669 A0A0G2JS52 829 aa19.45■□□□□ 0.7
SAPCD1-208ENST00000415669 MYT1Q01538 1121 aa19.45■□□□□ 0.7
SAPCD1-208ENST00000415669 POLKQ9UBT6 870 aa19.45■□□□□ 0.7
SAPCD1-208ENST00000415669 LRRC37A3O60309 1634 aa19.44■□□□□ 0.7
SAPCD1-208ENST00000415669 FAM98CQ17RN3 349 aaKnown RBP19.44■□□□□ 0.7
SAPCD1-208ENST00000415669 INSRP06213 1382 aa19.44■□□□□ 0.7
SAPCD1-208ENST00000415669 HSP90AB2PQ58FF8 381 aa19.42■□□□□ 0.7
SAPCD1-208ENST00000415669 TCP11L2Q8N4U5 519 aa19.42■□□□□ 0.7
SAPCD1-208ENST00000415669 NLRP2Q9NX02 1062 aa19.42■□□□□ 0.7
SAPCD1-208ENST00000415669 CARD10Q9BWT7 1032 aa19.4■□□□□ 0.7
SAPCD1-208ENST00000415669 THRAP3Q9Y2W1 955 aaKnown RBP19.39■□□□□ 0.69
SAPCD1-208ENST00000415669 BARGINQ6ZT62 677 aa19.38■□□□□ 0.69
SAPCD1-208ENST00000415669 SEPT12Q8IYM1 358 aa19.38■□□□□ 0.69
SAPCD1-208ENST00000415669 PARD3Q8TEW0 1356 aa19.37■□□□□ 0.69
SAPCD1-208ENST00000415669 RGPD1P0DJD0 1748 aa19.37■□□□□ 0.69
SAPCD1-208ENST00000415669 ONECUT3O60422 494 aaPredicted RBP19.36■□□□□ 0.69
SAPCD1-208ENST00000415669 MTHFSP49914 203 aa19.36■□□□□ 0.69
SAPCD1-208ENST00000415669 DISP2A7MBM2 1401 aa19.35■□□□□ 0.69
SAPCD1-208ENST00000415669 SHANK3Q9BYB0 1731 aa19.34■□□□□ 0.69
SAPCD1-208ENST00000415669 EIF4A2Q14240 407 aaKnown RBP19.34■□□□□ 0.69
SAPCD1-208ENST00000415669 USHBP1Q8N6Y0 703 aa19.34■□□□□ 0.69
SAPCD1-208ENST00000415669 NBPF6Q5VWK0 638 aa19.33■□□□□ 0.68
SAPCD1-208ENST00000415669 NBPF4Q96M43 638 aa19.33■□□□□ 0.68
SAPCD1-208ENST00000415669 COL3A1P02461 1466 aaPredicted RBP19.33■□□□□ 0.68
SAPCD1-208ENST00000415669 PPP2R1AP30153 589 aa19.32■□□□□ 0.68
SAPCD1-208ENST00000415669 TNS2Q63HR2 1409 aa19.32■□□□□ 0.68
SAPCD1-208ENST00000415669 MEGF6O75095 1541 aa19.31■□□□□ 0.68
SAPCD1-208ENST00000415669 IL2RBP14784 551 aa19.31■□□□□ 0.68
SAPCD1-208ENST00000415669 CDCA7Q9BWT1 371 aaPredicted RBP19.31■□□□□ 0.68
SAPCD1-208ENST00000415669 NCAPD2Q15021 1401 aa19.31■□□□□ 0.68
SAPCD1-208ENST00000415669 PKD1L3Q7Z443 1732 aa19.31■□□□□ 0.68
SAPCD1-208ENST00000415669 KRT27Q7Z3Y8 459 aa19.3■□□□□ 0.68
SAPCD1-208ENST00000415669 RALBP1Q15311 655 aa19.29■□□□□ 0.68
SAPCD1-208ENST00000415669 DDB1Q16531 1140 aa19.29■□□□□ 0.68
SAPCD1-208ENST00000415669 EP400Q96L91 3159 aa19.29■□□□□ 0.68
SAPCD1-208ENST00000415669 CFAP53Q96M91 514 aa19.28■□□□□ 0.68
SAPCD1-208ENST00000415669 EYA1Q99502 592 aa19.28■□□□□ 0.68
SAPCD1-208ENST00000415669 SBF2Q86WG5 1849 aa19.28■□□□□ 0.68
SAPCD1-208ENST00000415669 IGSF1Q8N6C5 1336 aa19.27■□□□□ 0.68
SAPCD1-208ENST00000415669 OVOS2A0A0G2JMS6 1433 aa19.27■□□□□ 0.68
SAPCD1-208ENST00000415669 PDE3BQ13370 1112 aa19.27■□□□□ 0.68
SAPCD1-208ENST00000415669 DIAPH1O60610 1272 aaKnown RBP19.26■□□□□ 0.67
SAPCD1-208ENST00000415669 IL13P35225 146 aa19.26■□□□□ 0.67
SAPCD1-208ENST00000415669 RAPGEF4Q8WZA2 1011 aa19.26■□□□□ 0.67
SAPCD1-208ENST00000415669 MYBBP1AQ9BQG0 1328 aaKnown RBP19.25■□□□□ 0.67
SAPCD1-208ENST00000415669 FAM182BQ5T319 152 aa19.24■□□□□ 0.67
SAPCD1-208ENST00000415669 TNS1Q9HBL0 1735 aaKnown RBP19.24■□□□□ 0.67
SAPCD1-208ENST00000415669 DOT1LQ8TEK3 1739 aa19.23■□□□□ 0.67
SAPCD1-208ENST00000415669 EXOC5O00471 708 aa19.23■□□□□ 0.67
SAPCD1-208ENST00000415669 TATP17735 454 aaPredicted RBP19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms