RNA–Protein interactions for RNA: ENST00000415620.1

LINC00428-201, long intergenic non-protein coding RNA 428, humanhuman

TSL 5 BASIC

Gene LINC00428, Length 227 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00428-201ENST00000415620 NBPF14Q5TI25 921 aa6.33□□□□□ -1.4
LINC00428-201ENST00000415620 SH3RF1Q7Z6J0 888 aa6.33□□□□□ -1.4
LINC00428-201ENST00000415620 TRMT44Q8IYL2 757 aaKnown RBP6.33□□□□□ -1.4
LINC00428-201ENST00000415620 VWA5B2Q8N398 1253 aa6.33□□□□□ -1.4
LINC00428-201ENST00000415620 PGPEP1Q9NXJ5 209 aa6.33□□□□□ -1.4
LINC00428-201ENST00000415620 SLC35F4A4IF30 521 aa6.32□□□□□ -1.4
LINC00428-201ENST00000415620 PER1O15534 1290 aaPredicted RBP6.32□□□□□ -1.4
LINC00428-201ENST00000415620 TUSC1Q2TAM9 212 aa6.32□□□□□ -1.4
LINC00428-201ENST00000415620 WHAMMQ8TF30 809 aa6.32□□□□□ -1.4
LINC00428-201ENST00000415620 MAGEB6P1A0A0J9YX57 407 aa6.31□□□□□ -1.4
LINC00428-201ENST00000415620 CDC14CA4D256 554 aa6.31□□□□□ -1.4
LINC00428-201ENST00000415620 SPINT1O43278 529 aa6.31□□□□□ -1.4
LINC00428-201ENST00000415620 ITGA6P23229 1130 aa6.31□□□□□ -1.4
LINC00428-201ENST00000415620 RIC3Q7Z5B4 369 aa6.31□□□□□ -1.4
LINC00428-201ENST00000415620 CABLES1Q8TDN4 633 aa6.31□□□□□ -1.4
LINC00428-201ENST00000415620 TSC1Q92574 1164 aa6.31□□□□□ -1.4
LINC00428-201ENST00000415620 TRIM66O15016 1216 aa6.3□□□□□ -1.4
LINC00428-201ENST00000415620 MAP3K10Q02779 954 aa6.3□□□□□ -1.4
LINC00428-201ENST00000415620 Q6ZVU0 165 aa6.3□□□□□ -1.4
LINC00428-201ENST00000415620 SH3BP5LQ7L8J4 393 aa6.3□□□□□ -1.4
LINC00428-201ENST00000415620 NUTM2BA6NNL0 878 aaPredicted RBP6.29□□□□□ -1.4
LINC00428-201ENST00000415620 NUTM2EB1AL46 878 aaPredicted RBP6.29□□□□□ -1.4
LINC00428-201ENST00000415620 CBLBQ13191 982 aa6.29□□□□□ -1.4
LINC00428-201ENST00000415620 CSPP1Q1MSJ5 1256 aa6.29□□□□□ -1.4
LINC00428-201ENST00000415620 PPP1R26Q5T8A7 1209 aaPredicted RBP6.29□□□□□ -1.4
LINC00428-201ENST00000415620 NUTM2DQ5VT03 806 aaPredicted RBP6.29□□□□□ -1.4
LINC00428-201ENST00000415620 NUTM2AQ8IVF1 878 aaPredicted RBP6.29□□□□□ -1.4
LINC00428-201ENST00000415620 ABCC9O60706 1549 aa6.29□□□□□ -1.4
LINC00428-201ENST00000415620 LILRB3O75022 631 aa6.28□□□□□ -1.4
LINC00428-201ENST00000415620 GPKOWQ92917 476 aaPredicted RBP eCLIP6.28□□□□□ -1.4
LINC00428-201ENST00000415620 ENAMQ9NRM1 1142 aa6.28□□□□□ -1.4
LINC00428-201ENST00000415620 LIMD1Q9UGP4 676 aa6.28□□□□□ -1.4
LINC00428-201ENST00000415620 ADAMTS2O95450 1211 aa6.27□□□□□ -1.41
LINC00428-201ENST00000415620 DHX9Q08211 1270 aaKnown RBP6.27□□□□□ -1.41
LINC00428-201ENST00000415620 QPCTQ16769 361 aa6.27□□□□□ -1.41
LINC00428-201ENST00000415620 MYSM1Q5VVJ2 828 aa6.27□□□□□ -1.41
LINC00428-201ENST00000415620 LYPD4Q6UWN0 246 aa6.27□□□□□ -1.41
LINC00428-201ENST00000415620 CARD14Q9BXL6 1004 aa6.27□□□□□ -1.41
LINC00428-201ENST00000415620 MSTNO14793 375 aa6.26□□□□□ -1.41
LINC00428-201ENST00000415620 SRSF11Q05519 484 aaKnown RBP6.26□□□□□ -1.41
LINC00428-201ENST00000415620 ERFEQ4G0M1 354 aa6.26□□□□□ -1.41
LINC00428-201ENST00000415620 HELBQ8NG08 1087 aaPredicted RBP6.26□□□□□ -1.41
LINC00428-201ENST00000415620 CDV3Q9UKY7 258 aaKnown RBP6.26□□□□□ -1.41
LINC00428-201ENST00000415620 PHF20L1A8MW92 1017 aa6.25□□□□□ -1.41
LINC00428-201ENST00000415620 CTSOP43234 321 aaPredicted RBP6.25□□□□□ -1.41
LINC00428-201ENST00000415620 XP32Q5T750 250 aa6.25□□□□□ -1.41
LINC00428-201ENST00000415620 AK7Q96M32 723 aa6.25□□□□□ -1.41
LINC00428-201ENST00000415620 POLMQ9NP87 494 aaPredicted RBP6.25□□□□□ -1.41
LINC00428-201ENST00000415620 CELA2BP08218 269 aaPredicted RBP6.24□□□□□ -1.41
LINC00428-201ENST00000415620 RELBQ01201 579 aa6.24□□□□□ -1.41
LINC00428-201ENST00000415620 KCTD15Q96SI1 283 aaPredicted RBP6.24□□□□□ -1.41
LINC00428-201ENST00000415620 INSM2Q96T92 566 aaPredicted RBP6.24□□□□□ -1.41
LINC00428-201ENST00000415620 ADAM23O75077 832 aa6.23□□□□□ -1.41
LINC00428-201ENST00000415620 RTL5Q5HYW3 569 aaPredicted RBP6.23□□□□□ -1.41
LINC00428-201ENST00000415620 SLC10A4Q96EP9 437 aa6.23□□□□□ -1.41
LINC00428-201ENST00000415620 AGBL1Q96MI9 1066 aa6.23□□□□□ -1.41
LINC00428-201ENST00000415620 PLA2G4EQ3MJ16 856 aa6.22□□□□□ -1.41
LINC00428-201ENST00000415620 PDXDC2PQ6P474 469 aa6.22□□□□□ -1.41
LINC00428-201ENST00000415620 BEND7Q8N7W2 519 aaPredicted RBP6.22□□□□□ -1.41
LINC00428-201ENST00000415620 RNF217Q8TC41 542 aa6.22□□□□□ -1.41
LINC00428-201ENST00000415620 ARHGAP9Q9BRR9 750 aa6.22□□□□□ -1.41
LINC00428-201ENST00000415620 PDE4DQ08499 809 aa6.21□□□□□ -1.42
LINC00428-201ENST00000415620 PODNQ7Z5L7 613 aa6.21□□□□□ -1.42
LINC00428-201ENST00000415620 ZBTB33Q86T24 672 aa6.21□□□□□ -1.42
LINC00428-201ENST00000415620 DCAF5Q96JK2 942 aa6.21□□□□□ -1.42
LINC00428-201ENST00000415620 ZNF395Q9H8N7 513 aaPredicted RBP6.21□□□□□ -1.42
LINC00428-201ENST00000415620 SENP3-EIF4A1A0A087X0R7 540 aa6.2□□□□□ -1.42
LINC00428-201ENST00000415620 CLK2P49760 499 aaKnown RBP6.2□□□□□ -1.42
LINC00428-201ENST00000415620 FOXR1Q6PIV2 292 aa6.2□□□□□ -1.42
LINC00428-201ENST00000415620 SPOCK3Q9BQ16 436 aa6.2□□□□□ -1.42
LINC00428-201ENST00000415620 CNTNAP5Q8WYK1 1306 aa6.2□□□□□ -1.42
LINC00428-201ENST00000415620 INTS6LQ5JSJ4 861 aaKnown RBP6.19□□□□□ -1.42
LINC00428-201ENST00000415620 GALNT6Q8NCL4 622 aa6.19□□□□□ -1.42
LINC00428-201ENST00000415620 NEDD1Q8NHV4 660 aa6.19□□□□□ -1.42
LINC00428-201ENST00000415620 GMCL1Q96IK5 515 aa6.19□□□□□ -1.42
LINC00428-201ENST00000415620 MBIPQ9NS73 344 aa6.19□□□□□ -1.42
LINC00428-201ENST00000415620 GAS6Q14393 721 aa6.18□□□□□ -1.42
LINC00428-201ENST00000415620 LYSMD3Q7Z3D4 306 aa6.18□□□□□ -1.42
LINC00428-201ENST00000415620 BCRP11274 1271 aa6.17□□□□□ -1.42
LINC00428-201ENST00000415620 OCSTAMPQ9BR26 566 aa6.17□□□□□ -1.42
LINC00428-201ENST00000415620 FKBPLQ9UIM3 349 aa6.17□□□□□ -1.42
LINC00428-201ENST00000415620 ZC3H4Q9UPT8 1303 aaKnown RBP6.17□□□□□ -1.42
LINC00428-201ENST00000415620 ADH1AP07327 375 aa6.16□□□□□ -1.42
LINC00428-201ENST00000415620 PTGIRP43119 386 aa6.16□□□□□ -1.42
LINC00428-201ENST00000415620 PTK2Q05397 1052 aa6.16□□□□□ -1.42
LINC00428-201ENST00000415620 CTDSPL2Q05D32 466 aa6.16□□□□□ -1.42
LINC00428-201ENST00000415620 NBPF20Q3BBV1 942 aa6.16□□□□□ -1.42
LINC00428-201ENST00000415620 FOXD4L5Q5VV16 416 aaPredicted RBP6.16□□□□□ -1.42
LINC00428-201ENST00000415620 TRIM52Q96A61 297 aa6.16□□□□□ -1.42
LINC00428-201ENST00000415620 CUEDC1Q9NWM3 386 aaPredicted RBP6.16□□□□□ -1.42
LINC00428-201ENST00000415620 IGF1RP08069 1367 aa6.16□□□□□ -1.42
LINC00428-201ENST00000415620 PROCP04070 461 aa6.15□□□□□ -1.42
LINC00428-201ENST00000415620 FBXO31Q5XUX0 539 aaPredicted RBP6.15□□□□□ -1.42
LINC00428-201ENST00000415620 TRIM22Q8IYM9 498 aa6.15□□□□□ -1.42
LINC00428-201ENST00000415620 TMPRSS4Q9NRS4 437 aa6.15□□□□□ -1.42
LINC00428-201ENST00000415620 K7ELQ4 463 aaPredicted RBP6.14□□□□□ -1.43
LINC00428-201ENST00000415620 ITGB2P05107 769 aa6.14□□□□□ -1.43
LINC00428-201ENST00000415620 PRICKLE2Q7Z3G6 844 aa6.14□□□□□ -1.43
LINC00428-201ENST00000415620 ZNF784Q8NCA9 323 aaPredicted RBP6.14□□□□□ -1.43
LINC00428-201ENST00000415620 LRRN4Q8WUT4 740 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms