RNA–Protein interactions for RNA: ENST00000412056.5

CPNE1-206, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-206ENST00000412056 NSD2O96028 1365 aa19.14■□□□□ 0.65
CPNE1-206ENST00000412056 AMER1Q5JTC6 1135 aaPredicted RBP19.13■□□□□ 0.65
CPNE1-206ENST00000412056 ILDR2Q71H61 639 aa19.13■□□□□ 0.65
CPNE1-206ENST00000412056 STRN4Q9NRL3 753 aa19.13■□□□□ 0.65
CPNE1-206ENST00000412056 MAP3K19Q56UN5 1328 aa19.12■□□□□ 0.65
CPNE1-206ENST00000412056 VPS72Q15906 364 aa19.12■□□□□ 0.65
CPNE1-206ENST00000412056 AXIN2Q9Y2T1 843 aa19.12■□□□□ 0.65
CPNE1-206ENST00000412056 RRS1Q15050 365 aaKnown RBP19.11■□□□□ 0.65
CPNE1-206ENST00000412056 RXRBP28702 533 aa19.1■□□□□ 0.65
CPNE1-206ENST00000412056 RBM6P78332 1123 aaKnown RBP19.1■□□□□ 0.65
CPNE1-206ENST00000412056 GJD4Q96KN9 370 aaPredicted RBP19.1■□□□□ 0.65
CPNE1-206ENST00000412056 CCDC9Q9Y3X0 531 aaKnown RBP19.1■□□□□ 0.65
CPNE1-206ENST00000412056 RGPD2P0DJD1 1756 aa19.1■□□□□ 0.65
CPNE1-206ENST00000412056 WNK3Q9BYP7 1800 aa19.09■□□□□ 0.65
CPNE1-206ENST00000412056 EVA1CP58658 441 aa19.08■□□□□ 0.64
CPNE1-206ENST00000412056 LARP1Q6PKG0 1096 aaKnown RBP19.08■□□□□ 0.64
CPNE1-206ENST00000412056 BRWD3Q6RI45 1802 aa19.08■□□□□ 0.64
CPNE1-206ENST00000412056 CDK12Q9NYV4 1490 aaPredicted RBP19.08■□□□□ 0.64
CPNE1-206ENST00000412056 RGS12O14924 1447 aa19.08■□□□□ 0.64
CPNE1-206ENST00000412056 FAM208AQ9UK61 1670 aaKnown RBP19.08■□□□□ 0.64
CPNE1-206ENST00000412056 RTL1A6NKG5 1358 aa19.07■□□□□ 0.64
CPNE1-206ENST00000412056 SPATA31A5Q5VU36 1347 aa19.07■□□□□ 0.64
CPNE1-206ENST00000412056 SPATA31A7Q8IWB4 1347 aa19.07■□□□□ 0.64
CPNE1-206ENST00000412056 TNNT2P45379 298 aaPredicted RBP19.07■□□□□ 0.64
CPNE1-206ENST00000412056 MORC1Q86VD1 984 aa19.07■□□□□ 0.64
CPNE1-206ENST00000412056 BLMP54132 1417 aaPredicted RBP19.07■□□□□ 0.64
CPNE1-206ENST00000412056 NPC1L1Q9UHC9 1359 aa19.06■□□□□ 0.64
CPNE1-206ENST00000412056 HOXC9P31274 260 aa19.06■□□□□ 0.64
CPNE1-206ENST00000412056 AMPHP49418 695 aa19.06■□□□□ 0.64
CPNE1-206ENST00000412056 CC2D1BQ5T0F9 858 aaKnown RBP19.06■□□□□ 0.64
CPNE1-206ENST00000412056 IP6K1Q92551 441 aa19.06■□□□□ 0.64
CPNE1-206ENST00000412056 EMILIN1Q9Y6C2 1016 aa19.06■□□□□ 0.64
CPNE1-206ENST00000412056 CRB1P82279 1406 aa19.06■□□□□ 0.64
CPNE1-206ENST00000412056 THSD7AQ9UPZ6 1657 aa19.05■□□□□ 0.64
CPNE1-206ENST00000412056 SPATA31A1Q5TZJ5 1347 aa19.04■□□□□ 0.64
CPNE1-206ENST00000412056 WDR17Q8IZU2 1322 aa19.04■□□□□ 0.64
CPNE1-206ENST00000412056 DDX10Q13206 875 aaKnown RBP19.04■□□□□ 0.64
CPNE1-206ENST00000412056 CNGB1Q14028 1251 aaPredicted RBP19.04■□□□□ 0.64
CPNE1-206ENST00000412056 FLT4P35916 1363 aa19.04■□□□□ 0.64
CPNE1-206ENST00000412056 ERBB3P21860 1342 aa19.03■□□□□ 0.64
CPNE1-206ENST00000412056 USP35Q9P2H5 1018 aa19.03■□□□□ 0.64
CPNE1-206ENST00000412056 SMG6Q86US8 1419 aaKnown RBP19.02■□□□□ 0.64
CPNE1-206ENST00000412056 ZNF316A6NFI3 1004 aaPredicted RBP19.02■□□□□ 0.64
CPNE1-206ENST00000412056 CSB-PGBD3P0DP91 1061 aa19.02■□□□□ 0.64
CPNE1-206ENST00000412056 TOM1L2Q6ZVM7 507 aa19.02■□□□□ 0.64
CPNE1-206ENST00000412056 ANKRD24Q8TF21 1146 aa19.02■□□□□ 0.64
CPNE1-206ENST00000412056 POLKQ9UBT6 870 aa19.02■□□□□ 0.64
CPNE1-206ENST00000412056 KIF24Q5T7B8 1368 aa19.02■□□□□ 0.64
CPNE1-206ENST00000412056 PPM1GO15355 546 aaPredicted RBP19.01■□□□□ 0.63
CPNE1-206ENST00000412056 LTV1Q96GA3 475 aaPredicted RBP19.01■□□□□ 0.63
CPNE1-206ENST00000412056 FAM98CQ17RN3 349 aaKnown RBP19■□□□□ 0.63
CPNE1-206ENST00000412056 INSRP06213 1382 aa19■□□□□ 0.63
CPNE1-206ENST00000412056 PARP4Q9UKK3 1724 aaKnown RBP19■□□□□ 0.63
CPNE1-206ENST00000412056 HSP90AB2PQ58FF8 381 aa18.99■□□□□ 0.63
CPNE1-206ENST00000412056 TCP11L2Q8N4U5 519 aa18.99■□□□□ 0.63
CPNE1-206ENST00000412056 LRRC37A3O60309 1634 aa18.97■□□□□ 0.63
CPNE1-206ENST00000412056 SEPT12Q8IYM1 358 aa18.97■□□□□ 0.63
CPNE1-206ENST00000412056 CARD10Q9BWT7 1032 aa18.97■□□□□ 0.63
CPNE1-206ENST00000412056 NLRP2Q9NX02 1062 aa18.97■□□□□ 0.63
CPNE1-206ENST00000412056 A0A0G2JS52 829 aa18.96■□□□□ 0.63
CPNE1-206ENST00000412056 ONECUT3O60422 494 aaPredicted RBP18.96■□□□□ 0.63
CPNE1-206ENST00000412056 MYT1Q01538 1121 aa18.96■□□□□ 0.63
CPNE1-206ENST00000412056 BARGINQ6ZT62 677 aa18.96■□□□□ 0.63
CPNE1-206ENST00000412056 THRAP3Q9Y2W1 955 aaKnown RBP18.95■□□□□ 0.62
CPNE1-206ENST00000412056 DISP2A7MBM2 1401 aa18.94■□□□□ 0.62
CPNE1-206ENST00000412056 PARD3Q8TEW0 1356 aa18.92■□□□□ 0.62
CPNE1-206ENST00000412056 RGPD1P0DJD0 1748 aa18.91■□□□□ 0.62
CPNE1-206ENST00000412056 MTHFSP49914 203 aa18.91■□□□□ 0.62
CPNE1-206ENST00000412056 EIF4A2Q14240 407 aaKnown RBP18.91■□□□□ 0.62
CPNE1-206ENST00000412056 NBPF6Q5VWK0 638 aa18.91■□□□□ 0.62
CPNE1-206ENST00000412056 USHBP1Q8N6Y0 703 aa18.91■□□□□ 0.62
CPNE1-206ENST00000412056 NBPF4Q96M43 638 aa18.91■□□□□ 0.62
CPNE1-206ENST00000412056 SHANK3Q9BYB0 1731 aa18.89■□□□□ 0.61
CPNE1-206ENST00000412056 NCAPD2Q15021 1401 aa18.89■□□□□ 0.61
CPNE1-206ENST00000412056 COL3A1P02461 1466 aaPredicted RBP18.89■□□□□ 0.61
CPNE1-206ENST00000412056 PPP2R1AP30153 589 aa18.88■□□□□ 0.61
CPNE1-206ENST00000412056 KRT27Q7Z3Y8 459 aa18.88■□□□□ 0.61
CPNE1-206ENST00000412056 MEGF6O75095 1541 aa18.88■□□□□ 0.61
CPNE1-206ENST00000412056 IL2RBP14784 551 aa18.87■□□□□ 0.61
CPNE1-206ENST00000412056 TNS2Q63HR2 1409 aa18.86■□□□□ 0.61
CPNE1-206ENST00000412056 EYA1Q99502 592 aa18.86■□□□□ 0.61
CPNE1-206ENST00000412056 CDCA7Q9BWT1 371 aaPredicted RBP18.86■□□□□ 0.61
CPNE1-206ENST00000412056 PKD1L3Q7Z443 1732 aa18.85■□□□□ 0.61
CPNE1-206ENST00000412056 SBF2Q86WG5 1849 aa18.84■□□□□ 0.61
CPNE1-206ENST00000412056 IGSF1Q8N6C5 1336 aa18.84■□□□□ 0.61
CPNE1-206ENST00000412056 DDB1Q16531 1140 aa18.84■□□□□ 0.61
CPNE1-206ENST00000412056 FAM182BQ5T319 152 aa18.84■□□□□ 0.61
CPNE1-206ENST00000412056 IL13P35225 146 aa18.83■□□□□ 0.6
CPNE1-206ENST00000412056 OVOS2A0A0G2JMS6 1433 aa18.83■□□□□ 0.6
CPNE1-206ENST00000412056 PDE3BQ13370 1112 aa18.82■□□□□ 0.6
CPNE1-206ENST00000412056 RALBP1Q15311 655 aa18.82■□□□□ 0.6
CPNE1-206ENST00000412056 SOCS7O14512 581 aa18.81■□□□□ 0.6
CPNE1-206ENST00000412056 KAT6BQ8WYB5 2073 aa18.81■□□□□ 0.6
CPNE1-206ENST00000412056 EXOC5O00471 708 aa18.8■□□□□ 0.6
CPNE1-206ENST00000412056 DIAPH1O60610 1272 aaKnown RBP18.8■□□□□ 0.6
CPNE1-206ENST00000412056 RAPGEF4Q8WZA2 1011 aa18.8■□□□□ 0.6
CPNE1-206ENST00000412056 TATP17735 454 aaPredicted RBP18.79■□□□□ 0.6
CPNE1-206ENST00000412056 CFAP53Q96M91 514 aa18.79■□□□□ 0.6
CPNE1-206ENST00000412056 TNS1Q9HBL0 1735 aaKnown RBP18.79■□□□□ 0.6
CPNE1-206ENST00000412056 AEBP1Q8IUX7 1158 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms