RNA–Protein interactions for RNA: ENST00000409860.1

C4orf48-202, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C4orf48, Length 477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-202ENST00000409860 MTHFSP49914 203 aa27.85■■■□□ 2.05
C4orf48-202ENST00000409860 BTG4Q9NY30 223 aa27.85■■■□□ 2.05
C4orf48-202ENST00000409860 LTN1O94822 1766 aa27.85■■■□□ 2.05
C4orf48-202ENST00000409860 MYBBP1AQ9BQG0 1328 aaKnown RBP27.85■■■□□ 2.05
C4orf48-202ENST00000409860 BLMP54132 1417 aaPredicted RBP27.84■■■□□ 2.05
C4orf48-202ENST00000409860 SLIT2O94813 1529 aa27.83■■■□□ 2.05
C4orf48-202ENST00000409860 FNBP4Q8N3X1 1017 aaPredicted RBP27.83■■■□□ 2.05
C4orf48-202ENST00000409860 CDK12Q9NYV4 1490 aaPredicted RBP27.83■■■□□ 2.04
C4orf48-202ENST00000409860 LMO7Q8WWI1 1683 aa27.82■■■□□ 2.04
C4orf48-202ENST00000409860 AXIN2Q9Y2T1 843 aa27.82■■■□□ 2.04
C4orf48-202ENST00000409860 AFF2P51816 1311 aa27.82■■■□□ 2.04
C4orf48-202ENST00000409860 INSRP06213 1382 aa27.81■■■□□ 2.04
C4orf48-202ENST00000409860 HSP90AB2PQ58FF8 381 aa27.8■■■□□ 2.04
C4orf48-202ENST00000409860 PLCH1Q4KWH8 1693 aa27.8■■■□□ 2.04
C4orf48-202ENST00000409860 CAMTA1Q9Y6Y1 1673 aa27.8■■■□□ 2.04
C4orf48-202ENST00000409860 PEAK1Q9H792 1746 aa27.8■■■□□ 2.04
C4orf48-202ENST00000409860 COL18A1P39060 1754 aa27.8■■■□□ 2.04
C4orf48-202ENST00000409860 MAP2P11137 1827 aaKnown RBP27.8■■■□□ 2.04
C4orf48-202ENST00000409860 EVA1CP58658 441 aa27.79■■■□□ 2.04
C4orf48-202ENST00000409860 CFAP53Q96M91 514 aa27.79■■■□□ 2.04
C4orf48-202ENST00000409860 USP21Q9UK80 565 aa27.79■■■□□ 2.04
C4orf48-202ENST00000409860 COL5A2P05997 1499 aaPredicted RBP27.78■■■□□ 2.04
C4orf48-202ENST00000409860 UNC5CLQ8IV45 518 aa27.78■■■□□ 2.04
C4orf48-202ENST00000409860 STRN4Q9NRL3 753 aa27.78■■■□□ 2.04
C4orf48-202ENST00000409860 ANKRD24Q8TF21 1146 aa27.77■■■□□ 2.04
C4orf48-202ENST00000409860 PHF23Q9BUL5 403 aaPredicted RBP27.77■■■□□ 2.04
C4orf48-202ENST00000409860 NWD2Q9ULI1 1742 aa27.77■■■□□ 2.04
C4orf48-202ENST00000409860 ERBB3P21860 1342 aa27.76■■■□□ 2.03
C4orf48-202ENST00000409860 CSB-PGBD3P0DP91 1061 aa27.76■■■□□ 2.03
C4orf48-202ENST00000409860 LTV1Q96GA3 475 aaPredicted RBP27.76■■■□□ 2.03
C4orf48-202ENST00000409860 BCL9LQ86UU0 1499 aa27.76■■■□□ 2.03
C4orf48-202ENST00000409860 ZNF772Q68DY9 489 aaPredicted RBP27.74■■■□□ 2.03
C4orf48-202ENST00000409860 WDR17Q8IZU2 1322 aa27.73■■■□□ 2.03
C4orf48-202ENST00000409860 NRAPQ86VF7 1730 aa27.72■■■□□ 2.03
C4orf48-202ENST00000409860 EIF4A2Q14240 407 aaKnown RBP27.71■■■□□ 2.03
C4orf48-202ENST00000409860 DIAPH1O60610 1272 aaKnown RBP27.7■■■□□ 2.02
C4orf48-202ENST00000409860 LARP1Q6PKG0 1096 aaKnown RBP27.7■■■□□ 2.02
C4orf48-202ENST00000409860 TOM1L2Q6ZVM7 507 aa27.7■■■□□ 2.02
C4orf48-202ENST00000409860 TRPC5Q9UL62 973 aaPredicted RBP27.7■■■□□ 2.02
C4orf48-202ENST00000409860 VPS72Q15906 364 aa27.69■■■□□ 2.02
C4orf48-202ENST00000409860 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.69■■■□□ 2.02
C4orf48-202ENST00000409860 NLRP2Q9NX02 1062 aa27.68■■■□□ 2.02
C4orf48-202ENST00000409860 CCDC9Q9Y3X0 531 aaKnown RBP27.68■■■□□ 2.02
C4orf48-202ENST00000409860 COL3A1P02461 1466 aaPredicted RBP27.68■■■□□ 2.02
C4orf48-202ENST00000409860 RGPD5Q99666 1765 aa27.68■■■□□ 2.02
C4orf48-202ENST00000409860 CRB1P82279 1406 aa27.67■■■□□ 2.02
C4orf48-202ENST00000409860 ATRNO75882 1429 aa27.67■■■□□ 2.02
C4orf48-202ENST00000409860 IL13P35225 146 aa27.66■■■□□ 2.02
C4orf48-202ENST00000409860 QTRT2Q9H974 415 aaKnown RBP27.65■■■□□ 2.02
C4orf48-202ENST00000409860 NUDCQ9Y266 331 aa27.65■■■□□ 2.02
C4orf48-202ENST00000409860 CARD10Q9BWT7 1032 aa27.64■■■□□ 2.02
C4orf48-202ENST00000409860 SPATA31A5Q5VU36 1347 aa27.64■■■□□ 2.01
C4orf48-202ENST00000409860 SPATA31A7Q8IWB4 1347 aa27.64■■■□□ 2.01
C4orf48-202ENST00000409860 FAM208AQ9UK61 1670 aaKnown RBP27.63■■■□□ 2.01
C4orf48-202ENST00000409860 NBPF6Q5VWK0 638 aa27.62■■■□□ 2.01
C4orf48-202ENST00000409860 NBPF4Q96M43 638 aa27.62■■■□□ 2.01
C4orf48-202ENST00000409860 SPATA31A1Q5TZJ5 1347 aa27.62■■■□□ 2.01
C4orf48-202ENST00000409860 EYA1Q99502 592 aa27.61■■■□□ 2.01
C4orf48-202ENST00000409860 USP35Q9P2H5 1018 aa27.61■■■□□ 2.01
C4orf48-202ENST00000409860 RGS17Q9UGC6 210 aaPredicted RBP27.61■■■□□ 2.01
C4orf48-202ENST00000409860 U2SURPO15042 1029 aaKnown RBP27.6■■■□□ 2.01
C4orf48-202ENST00000409860 TCP11L2Q8N4U5 519 aa27.6■■■□□ 2.01
C4orf48-202ENST00000409860 GJD4Q96KN9 370 aaPredicted RBP27.6■■■□□ 2.01
C4orf48-202ENST00000409860 MRS2Q9HD23 443 aa27.59■■■□□ 2.01
C4orf48-202ENST00000409860 THRAP3Q9Y2W1 955 aaKnown RBP27.59■■■□□ 2.01
C4orf48-202ENST00000409860 IGSF1Q8N6C5 1336 aa27.59■■■□□ 2.01
C4orf48-202ENST00000409860 MIER1Q8N108 512 aa27.57■■■□□ 2
C4orf48-202ENST00000409860 USHBP1Q8N6Y0 703 aa27.57■■■□□ 2
C4orf48-202ENST00000409860 CCER2I3L3R5 266 aa27.55■■■□□ 2
C4orf48-202ENST00000409860 RBM6P78332 1123 aaKnown RBP27.55■■■□□ 2
C4orf48-202ENST00000409860 CCDC184Q52MB2 194 aa27.55■■■□□ 2
C4orf48-202ENST00000409860 NCAPD2Q15021 1401 aa27.55■■■□□ 2
C4orf48-202ENST00000409860 U2AF1L5P0DN76 240 aaPredicted RBP27.54■■■□□ 2
C4orf48-202ENST00000409860 U2AF1Q01081 240 aaKnown RBP eCLIP27.54■■■□□ 2
C4orf48-202ENST00000409860 BARGINQ6ZT62 677 aa27.54■■■□□ 2
C4orf48-202ENST00000409860 WDR43Q15061 677 aaKnown RBP eCLIP27.53■■■□□ 2
C4orf48-202ENST00000409860 SULT6B1Q6IMI4 303 aa27.53■■■□□ 2
C4orf48-202ENST00000409860 POTEAQ6S8J7 498 aa27.53■■■□□ 2
C4orf48-202ENST00000409860 RXRBP28702 533 aa27.52■■■□□ 2
C4orf48-202ENST00000409860 CDCA7Q9BWT1 371 aaPredicted RBP27.52■■■□□ 2
C4orf48-202ENST00000409860 RGPD1P0DJD0 1748 aa27.52■■■□□ 2
C4orf48-202ENST00000409860 GLI3P10071 1580 aa27.52■■■□□ 2
C4orf48-202ENST00000409860 IL2RBP14784 551 aa27.51■■□□□ 1.99
C4orf48-202ENST00000409860 FAM98CQ17RN3 349 aaKnown RBP27.51■■□□□ 1.99
C4orf48-202ENST00000409860 RAPGEF4Q8WZA2 1011 aa27.51■■□□□ 1.99
C4orf48-202ENST00000409860 KDRP35968 1356 aa27.5■■□□□ 1.99
C4orf48-202ENST00000409860 HMOX1P09601 288 aa27.5■■□□□ 1.99
C4orf48-202ENST00000409860 AEBP1Q8IUX7 1158 aa27.5■■□□□ 1.99
C4orf48-202ENST00000409860 RGPD2P0DJD1 1756 aa27.5■■□□□ 1.99
C4orf48-202ENST00000409860 A0A0G2JS52 829 aa27.48■■□□□ 1.99
C4orf48-202ENST00000409860 TATP17735 454 aaPredicted RBP27.48■■□□□ 1.99
C4orf48-202ENST00000409860 MYT1Q01538 1121 aa27.48■■□□□ 1.99
C4orf48-202ENST00000409860 DISP2A7MBM2 1401 aa27.47■■□□□ 1.99
C4orf48-202ENST00000409860 FCHSD2O94868 740 aa27.45■■□□□ 1.98
C4orf48-202ENST00000409860 MEGF6O75095 1541 aa27.45■■□□□ 1.98
C4orf48-202ENST00000409860 ONECUT3O60422 494 aaPredicted RBP27.44■■□□□ 1.98
C4orf48-202ENST00000409860 PNISRQ8TF01 805 aaKnown RBP27.44■■□□□ 1.98
C4orf48-202ENST00000409860 RSPH6AQ9H0K4 717 aa27.44■■□□□ 1.98
C4orf48-202ENST00000409860 PLEKHG2Q9H7P9 1386 aa27.44■■□□□ 1.98
C4orf48-202ENST00000409860 PNNQ9H307 717 aaKnown RBP27.43■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms