RNA–Protein interactions for RNA: ENST00000398519.9

CSNK1D-204, Transcript of casein kinase 1 delta, humanhuman

TSL 5 BASIC

Gene CSNK1D, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-204ENST00000398519 AXIN2Q9Y2T1 843 aa23.66■■□□□ 1.38
CSNK1D-204ENST00000398519 PEAK1Q9H792 1746 aa23.66■■□□□ 1.38
CSNK1D-204ENST00000398519 UNC5CLQ8IV45 518 aa23.65■■□□□ 1.38
CSNK1D-204ENST00000398519 RGPD5Q99666 1765 aa23.65■■□□□ 1.38
CSNK1D-204ENST00000398519 ZNF772Q68DY9 489 aaPredicted RBP23.65■■□□□ 1.38
CSNK1D-204ENST00000398519 COL5A2P05997 1499 aaPredicted RBP23.64■■□□□ 1.38
CSNK1D-204ENST00000398519 MAP2P11137 1827 aaKnown RBP23.64■■□□□ 1.37
CSNK1D-204ENST00000398519 RTL1A6NKG5 1358 aa23.63■■□□□ 1.37
CSNK1D-204ENST00000398519 EMILIN1Q9Y6C2 1016 aa23.63■■□□□ 1.37
CSNK1D-204ENST00000398519 POLKQ9UBT6 870 aa23.62■■□□□ 1.37
CSNK1D-204ENST00000398519 ATRNO75882 1429 aa23.62■■□□□ 1.37
CSNK1D-204ENST00000398519 HOXC9P31274 260 aa23.61■■□□□ 1.37
CSNK1D-204ENST00000398519 AMPHP49418 695 aa23.61■■□□□ 1.37
CSNK1D-204ENST00000398519 IP6K1Q92551 441 aa23.61■■□□□ 1.37
CSNK1D-204ENST00000398519 KIF24Q5T7B8 1368 aa23.61■■□□□ 1.37
CSNK1D-204ENST00000398519 BLMP54132 1417 aaPredicted RBP23.61■■□□□ 1.37
CSNK1D-204ENST00000398519 SMG6Q86US8 1419 aaKnown RBP23.61■■□□□ 1.37
CSNK1D-204ENST00000398519 POTEAQ6S8J7 498 aa23.6■■□□□ 1.37
CSNK1D-204ENST00000398519 STRN4Q9NRL3 753 aa23.6■■□□□ 1.37
CSNK1D-204ENST00000398519 FLT4P35916 1363 aa23.59■■□□□ 1.37
CSNK1D-204ENST00000398519 QTRT2Q9H974 415 aaKnown RBP23.59■■□□□ 1.37
CSNK1D-204ENST00000398519 TRPC5Q9UL62 973 aaPredicted RBP23.59■■□□□ 1.37
CSNK1D-204ENST00000398519 PPM1GO15355 546 aaPredicted RBP23.57■■□□□ 1.36
CSNK1D-204ENST00000398519 EVA1CP58658 441 aa23.57■■□□□ 1.36
CSNK1D-204ENST00000398519 VPS72Q15906 364 aa23.57■■□□□ 1.36
CSNK1D-204ENST00000398519 PARD3Q8TEW0 1356 aa23.57■■□□□ 1.36
CSNK1D-204ENST00000398519 LARP1Q6PKG0 1096 aaKnown RBP23.57■■□□□ 1.36
CSNK1D-204ENST00000398519 ERBB3P21860 1342 aa23.56■■□□□ 1.36
CSNK1D-204ENST00000398519 HSP90AB2PQ58FF8 381 aa23.56■■□□□ 1.36
CSNK1D-204ENST00000398519 INSRP06213 1382 aa23.56■■□□□ 1.36
CSNK1D-204ENST00000398519 ANKRD24Q8TF21 1146 aa23.55■■□□□ 1.36
CSNK1D-204ENST00000398519 WDR17Q8IZU2 1322 aa23.55■■□□□ 1.36
CSNK1D-204ENST00000398519 GLI3P10071 1580 aa23.55■■□□□ 1.36
CSNK1D-204ENST00000398519 CDK12Q9NYV4 1490 aaPredicted RBP23.54■■□□□ 1.36
CSNK1D-204ENST00000398519 CRB1P82279 1406 aa23.53■■□□□ 1.36
CSNK1D-204ENST00000398519 GJD4Q96KN9 370 aaPredicted RBP23.53■■□□□ 1.36
CSNK1D-204ENST00000398519 SPATA31A5Q5VU36 1347 aa23.53■■□□□ 1.36
CSNK1D-204ENST00000398519 SPATA31A7Q8IWB4 1347 aa23.53■■□□□ 1.36
CSNK1D-204ENST00000398519 CCDC9Q9Y3X0 531 aaKnown RBP23.52■■□□□ 1.36
CSNK1D-204ENST00000398519 CSB-PGBD3P0DP91 1061 aa23.52■■□□□ 1.36
CSNK1D-204ENST00000398519 MTHFSP49914 203 aa23.52■■□□□ 1.36
CSNK1D-204ENST00000398519 LTV1Q96GA3 475 aaPredicted RBP23.52■■□□□ 1.36
CSNK1D-204ENST00000398519 FAM208AQ9UK61 1670 aaKnown RBP23.51■■□□□ 1.35
CSNK1D-204ENST00000398519 SPATA31A1Q5TZJ5 1347 aa23.51■■□□□ 1.35
CSNK1D-204ENST00000398519 PPP2R1AP30153 589 aa23.51■■□□□ 1.35
CSNK1D-204ENST00000398519 RBM6P78332 1123 aaKnown RBP23.5■■□□□ 1.35
CSNK1D-204ENST00000398519 TOM1L2Q6ZVM7 507 aa23.5■■□□□ 1.35
CSNK1D-204ENST00000398519 RXRBP28702 533 aa23.48■■□□□ 1.35
CSNK1D-204ENST00000398519 RALBP1Q15311 655 aa23.48■■□□□ 1.35
CSNK1D-204ENST00000398519 USP35Q9P2H5 1018 aa23.48■■□□□ 1.35
CSNK1D-204ENST00000398519 RGPD2P0DJD1 1756 aa23.47■■□□□ 1.35
CSNK1D-204ENST00000398519 CARD10Q9BWT7 1032 aa23.46■■□□□ 1.35
CSNK1D-204ENST00000398519 PRKRIP1Q9H875 184 aaPredicted RBP23.46■■□□□ 1.35
CSNK1D-204ENST00000398519 NLRP2Q9NX02 1062 aa23.46■■□□□ 1.35
CSNK1D-204ENST00000398519 EIF4A2Q14240 407 aaKnown RBP23.45■■□□□ 1.34
CSNK1D-204ENST00000398519 TCP11L2Q8N4U5 519 aa23.44■■□□□ 1.34
CSNK1D-204ENST00000398519 COL3A1P02461 1466 aaPredicted RBP23.44■■□□□ 1.34
CSNK1D-204ENST00000398519 FAM98CQ17RN3 349 aaKnown RBP23.44■■□□□ 1.34
CSNK1D-204ENST00000398519 WNK3Q9BYP7 1800 aa23.43■■□□□ 1.34
CSNK1D-204ENST00000398519 NBPF6Q5VWK0 638 aa23.43■■□□□ 1.34
CSNK1D-204ENST00000398519 NBPF4Q96M43 638 aa23.43■■□□□ 1.34
CSNK1D-204ENST00000398519 THRAP3Q9Y2W1 955 aaKnown RBP23.43■■□□□ 1.34
CSNK1D-204ENST00000398519 RGS12O14924 1447 aa23.42■■□□□ 1.34
CSNK1D-204ENST00000398519 THSD7AQ9UPZ6 1657 aa23.42■■□□□ 1.34
CSNK1D-204ENST00000398519 BARGINQ6ZT62 677 aa23.42■■□□□ 1.34
CSNK1D-204ENST00000398519 MYBBP1AQ9BQG0 1328 aaKnown RBP23.42■■□□□ 1.34
CSNK1D-204ENST00000398519 ONECUT3O60422 494 aaPredicted RBP23.41■■□□□ 1.34
CSNK1D-204ENST00000398519 RGPD1P0DJD0 1748 aa23.4■■□□□ 1.34
CSNK1D-204ENST00000398519 IL13P35225 146 aa23.4■■□□□ 1.34
CSNK1D-204ENST00000398519 EYA1Q99502 592 aa23.4■■□□□ 1.34
CSNK1D-204ENST00000398519 DISP2A7MBM2 1401 aa23.39■■□□□ 1.33
CSNK1D-204ENST00000398519 NCAPD2Q15021 1401 aa23.39■■□□□ 1.33
CSNK1D-204ENST00000398519 USHBP1Q8N6Y0 703 aa23.39■■□□□ 1.33
CSNK1D-204ENST00000398519 DIAPH1O60610 1272 aaKnown RBP23.37■■□□□ 1.33
CSNK1D-204ENST00000398519 CFAP53Q96M91 514 aa23.37■■□□□ 1.33
CSNK1D-204ENST00000398519 ANP32CO43423 234 aa23.36■■□□□ 1.33
CSNK1D-204ENST00000398519 SEPT12Q8IYM1 358 aa23.36■■□□□ 1.33
CSNK1D-204ENST00000398519 IGSF1Q8N6C5 1336 aa23.36■■□□□ 1.33
CSNK1D-204ENST00000398519 PARP4Q9UKK3 1724 aaKnown RBP23.36■■□□□ 1.33
CSNK1D-204ENST00000398519 LRRC37A3O60309 1634 aa23.35■■□□□ 1.33
CSNK1D-204ENST00000398519 A0A0G2JS52 829 aa23.35■■□□□ 1.33
CSNK1D-204ENST00000398519 MYT1Q01538 1121 aa23.35■■□□□ 1.33
CSNK1D-204ENST00000398519 MEGF6O75095 1541 aa23.34■■□□□ 1.33
CSNK1D-204ENST00000398519 IL2RBP14784 551 aa23.33■■□□□ 1.33
CSNK1D-204ENST00000398519 ILDR2Q71H61 639 aa23.33■■□□□ 1.33
CSNK1D-204ENST00000398519 BRWD3Q6RI45 1802 aa23.33■■□□□ 1.33
CSNK1D-204ENST00000398519 CDCA7Q9BWT1 371 aaPredicted RBP23.32■■□□□ 1.32
CSNK1D-204ENST00000398519 AEBP1Q8IUX7 1158 aa23.3■■□□□ 1.32
CSNK1D-204ENST00000398519 KDRP35968 1356 aa23.29■■□□□ 1.32
CSNK1D-204ENST00000398519 OVOS2A0A0G2JMS6 1433 aa23.29■■□□□ 1.32
CSNK1D-204ENST00000398519 U2SURPO15042 1029 aaKnown RBP23.28■■□□□ 1.32
CSNK1D-204ENST00000398519 SULT6B1Q6IMI4 303 aa23.28■■□□□ 1.32
CSNK1D-204ENST00000398519 RAPGEF4Q8WZA2 1011 aa23.28■■□□□ 1.32
CSNK1D-204ENST00000398519 TNS2Q63HR2 1409 aa23.28■■□□□ 1.32
CSNK1D-204ENST00000398519 DDB1Q16531 1140 aa23.27■■□□□ 1.32
CSNK1D-204ENST00000398519 DIEXFQ68CQ4 756 aaKnown RBP23.27■■□□□ 1.32
CSNK1D-204ENST00000398519 TATP17735 454 aaPredicted RBP23.26■■□□□ 1.31
CSNK1D-204ENST00000398519 NUDCQ9Y266 331 aa23.26■■□□□ 1.31
CSNK1D-204ENST00000398519 EP400Q96L91 3159 aa23.26■■□□□ 1.31
CSNK1D-204ENST00000398519 HMOX1P09601 288 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms