RNA–Protein interactions for RNA: ENST00000396859.5

GAPDH-204, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAPDH, Length 1,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-204ENST00000396859 LMO7Q8WWI1 1683 aa18.6■□□□□ 0.57
GAPDH-204ENST00000396859 NPC1L1Q9UHC9 1359 aa18.6■□□□□ 0.57
GAPDH-204ENST00000396859 TNNT2P45379 298 aaPredicted RBP18.6■□□□□ 0.57
GAPDH-204ENST00000396859 NRAPQ86VF7 1730 aa18.6■□□□□ 0.57
GAPDH-204ENST00000396859 MAP3K19Q56UN5 1328 aa18.59■□□□□ 0.57
GAPDH-204ENST00000396859 CNGB1Q14028 1251 aaPredicted RBP18.59■□□□□ 0.57
GAPDH-204ENST00000396859 RRS1Q15050 365 aaKnown RBP18.59■□□□□ 0.57
GAPDH-204ENST00000396859 CAMTA1Q9Y6Y1 1673 aa18.59■□□□□ 0.57
GAPDH-204ENST00000396859 ATRNO75882 1429 aa18.58■□□□□ 0.57
GAPDH-204ENST00000396859 RTL1A6NKG5 1358 aa18.58■□□□□ 0.57
GAPDH-204ENST00000396859 RXRBP28702 533 aa18.58■□□□□ 0.56
GAPDH-204ENST00000396859 VPS72Q15906 364 aa18.58■□□□□ 0.56
GAPDH-204ENST00000396859 POTEAQ6S8J7 498 aa18.58■□□□□ 0.56
GAPDH-204ENST00000396859 COL18A1P39060 1754 aa18.58■□□□□ 0.56
GAPDH-204ENST00000396859 KIF24Q5T7B8 1368 aa18.57■□□□□ 0.56
GAPDH-204ENST00000396859 CSB-PGBD3P0DP91 1061 aa18.57■□□□□ 0.56
GAPDH-204ENST00000396859 FBLN1P23142 703 aa18.57■□□□□ 0.56
GAPDH-204ENST00000396859 RBM6P78332 1123 aaKnown RBP18.57■□□□□ 0.56
GAPDH-204ENST00000396859 IP6K1Q92551 441 aa18.57■□□□□ 0.56
GAPDH-204ENST00000396859 COL5A2P05997 1499 aaPredicted RBP18.57■□□□□ 0.56
GAPDH-204ENST00000396859 BLMP54132 1417 aaPredicted RBP18.57■□□□□ 0.56
GAPDH-204ENST00000396859 PPM1GO15355 546 aaPredicted RBP18.56■□□□□ 0.56
GAPDH-204ENST00000396859 HOXC9P31274 260 aa18.55■□□□□ 0.56
GAPDH-204ENST00000396859 GJD4Q96KN9 370 aaPredicted RBP18.55■□□□□ 0.56
GAPDH-204ENST00000396859 AXIN2Q9Y2T1 843 aa18.55■□□□□ 0.56
GAPDH-204ENST00000396859 RGPD5Q99666 1765 aa18.55■□□□□ 0.56
GAPDH-204ENST00000396859 FLT4P35916 1363 aa18.55■□□□□ 0.56
GAPDH-204ENST00000396859 MAP2P11137 1827 aaKnown RBP18.54■□□□□ 0.56
GAPDH-204ENST00000396859 TOM1L2Q6ZVM7 507 aa18.54■□□□□ 0.56
GAPDH-204ENST00000396859 EMILIN1Q9Y6C2 1016 aa18.54■□□□□ 0.56
GAPDH-204ENST00000396859 SMG6Q86US8 1419 aaKnown RBP18.54■□□□□ 0.56
GAPDH-204ENST00000396859 WDR17Q8IZU2 1322 aa18.53■□□□□ 0.56
GAPDH-204ENST00000396859 LARP1Q6PKG0 1096 aaKnown RBP18.53■□□□□ 0.56
GAPDH-204ENST00000396859 ANKRD24Q8TF21 1146 aa18.53■□□□□ 0.56
GAPDH-204ENST00000396859 CRB1P82279 1406 aa18.52■□□□□ 0.56
GAPDH-204ENST00000396859 LTV1Q96GA3 475 aaPredicted RBP18.52■□□□□ 0.56
GAPDH-204ENST00000396859 POLKQ9UBT6 870 aa18.52■□□□□ 0.56
GAPDH-204ENST00000396859 ERBB3P21860 1342 aa18.51■□□□□ 0.55
GAPDH-204ENST00000396859 SPATA31A5Q5VU36 1347 aa18.51■□□□□ 0.55
GAPDH-204ENST00000396859 SPATA31A7Q8IWB4 1347 aa18.51■□□□□ 0.55
GAPDH-204ENST00000396859 USP35Q9P2H5 1018 aa18.51■□□□□ 0.55
GAPDH-204ENST00000396859 SPATA31A1Q5TZJ5 1347 aa18.5■□□□□ 0.55
GAPDH-204ENST00000396859 A0A0G2JS52 829 aa18.5■□□□□ 0.55
GAPDH-204ENST00000396859 MYT1Q01538 1121 aa18.5■□□□□ 0.55
GAPDH-204ENST00000396859 NLRP2Q9NX02 1062 aa18.5■□□□□ 0.55
GAPDH-204ENST00000396859 INSRP06213 1382 aa18.5■□□□□ 0.55
GAPDH-204ENST00000396859 PEAK1Q9H792 1746 aa18.49■□□□□ 0.55
GAPDH-204ENST00000396859 THRAP3Q9Y2W1 955 aaKnown RBP18.49■□□□□ 0.55
GAPDH-204ENST00000396859 GLI3P10071 1580 aa18.49■□□□□ 0.55
GAPDH-204ENST00000396859 FAM208AQ9UK61 1670 aaKnown RBP18.49■□□□□ 0.55
GAPDH-204ENST00000396859 CDK12Q9NYV4 1490 aaPredicted RBP18.48■□□□□ 0.55
GAPDH-204ENST00000396859 HSP90AB2PQ58FF8 381 aa18.48■□□□□ 0.55
GAPDH-204ENST00000396859 TCP11L2Q8N4U5 519 aa18.48■□□□□ 0.55
GAPDH-204ENST00000396859 FAM98CQ17RN3 349 aaKnown RBP18.47■□□□□ 0.55
GAPDH-204ENST00000396859 CARD10Q9BWT7 1032 aa18.47■□□□□ 0.55
GAPDH-204ENST00000396859 MTHFSP49914 203 aa18.46■□□□□ 0.55
GAPDH-204ENST00000396859 RALBP1Q15311 655 aa18.45■□□□□ 0.54
GAPDH-204ENST00000396859 BARGINQ6ZT62 677 aa18.45■□□□□ 0.54
GAPDH-204ENST00000396859 CFAP53Q96M91 514 aa18.44■□□□□ 0.54
GAPDH-204ENST00000396859 RGS12O14924 1447 aa18.43■□□□□ 0.54
GAPDH-204ENST00000396859 CDCA7Q9BWT1 371 aaPredicted RBP18.43■□□□□ 0.54
GAPDH-204ENST00000396859 PARD3Q8TEW0 1356 aa18.42■□□□□ 0.54
GAPDH-204ENST00000396859 ONECUT3O60422 494 aaPredicted RBP18.42■□□□□ 0.54
GAPDH-204ENST00000396859 PPP2R1AP30153 589 aa18.42■□□□□ 0.54
GAPDH-204ENST00000396859 SEPT12Q8IYM1 358 aa18.42■□□□□ 0.54
GAPDH-204ENST00000396859 EIF4A2Q14240 407 aaKnown RBP18.4■□□□□ 0.54
GAPDH-204ENST00000396859 IL2RBP14784 551 aa18.39■□□□□ 0.53
GAPDH-204ENST00000396859 NBPF6Q5VWK0 638 aa18.39■□□□□ 0.53
GAPDH-204ENST00000396859 NBPF4Q96M43 638 aa18.39■□□□□ 0.53
GAPDH-204ENST00000396859 RGPD2P0DJD1 1756 aa18.39■□□□□ 0.53
GAPDH-204ENST00000396859 THSD7AQ9UPZ6 1657 aa18.38■□□□□ 0.53
GAPDH-204ENST00000396859 WNK3Q9BYP7 1800 aa18.38■□□□□ 0.53
GAPDH-204ENST00000396859 DIAPH1O60610 1272 aaKnown RBP18.38■□□□□ 0.53
GAPDH-204ENST00000396859 PDE3BQ13370 1112 aa18.37■□□□□ 0.53
GAPDH-204ENST00000396859 USHBP1Q8N6Y0 703 aa18.37■□□□□ 0.53
GAPDH-204ENST00000396859 RAPGEF4Q8WZA2 1011 aa18.37■□□□□ 0.53
GAPDH-204ENST00000396859 MYBBP1AQ9BQG0 1328 aaKnown RBP18.37■□□□□ 0.53
GAPDH-204ENST00000396859 ANP32CO43423 234 aa18.36■□□□□ 0.53
GAPDH-204ENST00000396859 DDB1Q16531 1140 aa18.36■□□□□ 0.53
GAPDH-204ENST00000396859 KRT27Q7Z3Y8 459 aa18.36■□□□□ 0.53
GAPDH-204ENST00000396859 EYA1Q99502 592 aa18.36■□□□□ 0.53
GAPDH-204ENST00000396859 PARP4Q9UKK3 1724 aaKnown RBP18.35■□□□□ 0.53
GAPDH-204ENST00000396859 EXOC5O00471 708 aa18.35■□□□□ 0.53
GAPDH-204ENST00000396859 TATP17735 454 aaPredicted RBP18.35■□□□□ 0.53
GAPDH-204ENST00000396859 PRKRIP1Q9H875 184 aaPredicted RBP18.35■□□□□ 0.53
GAPDH-204ENST00000396859 NUDCQ9Y266 331 aa18.35■□□□□ 0.53
GAPDH-204ENST00000396859 DISP2A7MBM2 1401 aa18.34■□□□□ 0.53
GAPDH-204ENST00000396859 IL13P35225 146 aa18.34■□□□□ 0.53
GAPDH-204ENST00000396859 BRWD3Q6RI45 1802 aa18.33■□□□□ 0.53
GAPDH-204ENST00000396859 IGSF1Q8N6C5 1336 aa18.33■□□□□ 0.53
GAPDH-204ENST00000396859 LRRC37A3O60309 1634 aa18.32■□□□□ 0.52
GAPDH-204ENST00000396859 U2SURPO15042 1029 aaKnown RBP18.32■□□□□ 0.52
GAPDH-204ENST00000396859 COL3A1P02461 1466 aaPredicted RBP18.31■□□□□ 0.52
GAPDH-204ENST00000396859 NCAPD2Q15021 1401 aa18.31■□□□□ 0.52
GAPDH-204ENST00000396859 TNS2Q63HR2 1409 aa18.31■□□□□ 0.52
GAPDH-204ENST00000396859 SULT6B1Q6IMI4 303 aa18.29■□□□□ 0.52
GAPDH-204ENST00000396859 ZCRB1Q8TBF4 217 aaKnown RBP18.29■□□□□ 0.52
GAPDH-204ENST00000396859 OVOS2A0A0G2JMS6 1433 aa18.29■□□□□ 0.52
GAPDH-204ENST00000396859 RGPD1P0DJD0 1748 aa18.29■□□□□ 0.52
GAPDH-204ENST00000396859 MEGF6O75095 1541 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms