RNA–Protein interactions for RNA: ENST00000378518.5

RER1-204, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 3 BASIC

Gene RER1, Length 522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-204ENST00000378518 CCDC9Q9Y3X0 531 aaKnown RBP27.4■■□□□ 1.98
RER1-204ENST00000378518 COL5A2P05997 1499 aaPredicted RBP27.38■■□□□ 1.97
RER1-204ENST00000378518 MAP2P11137 1827 aaKnown RBP27.38■■□□□ 1.97
RER1-204ENST00000378518 GJD4Q96KN9 370 aaPredicted RBP27.37■■□□□ 1.97
RER1-204ENST00000378518 GLI3P10071 1580 aa27.36■■□□□ 1.97
RER1-204ENST00000378518 PER1O15534 1290 aaPredicted RBP27.35■■□□□ 1.97
RER1-204ENST00000378518 CDK12Q9NYV4 1490 aaPredicted RBP27.35■■□□□ 1.97
RER1-204ENST00000378518 AMPHP49418 695 aa27.34■■□□□ 1.97
RER1-204ENST00000378518 MAP3K19Q56UN5 1328 aa27.34■■□□□ 1.97
RER1-204ENST00000378518 RTL1A6NKG5 1358 aa27.34■■□□□ 1.97
RER1-204ENST00000378518 BLMP54132 1417 aaPredicted RBP27.33■■□□□ 1.97
RER1-204ENST00000378518 AMER1Q5JTC6 1135 aaPredicted RBP27.33■■□□□ 1.97
RER1-204ENST00000378518 RRS1Q15050 365 aaKnown RBP27.32■■□□□ 1.96
RER1-204ENST00000378518 MORC1Q86VD1 984 aa27.32■■□□□ 1.96
RER1-204ENST00000378518 AXIN2Q9Y2T1 843 aa27.32■■□□□ 1.96
RER1-204ENST00000378518 FAM208AQ9UK61 1670 aaKnown RBP27.31■■□□□ 1.96
RER1-204ENST00000378518 FBLN1P23142 703 aa27.31■■□□□ 1.96
RER1-204ENST00000378518 IP6K1Q92551 441 aa27.31■■□□□ 1.96
RER1-204ENST00000378518 SPATA31A5Q5VU36 1347 aa27.31■■□□□ 1.96
RER1-204ENST00000378518 SPATA31A7Q8IWB4 1347 aa27.31■■□□□ 1.96
RER1-204ENST00000378518 CSB-PGBD3P0DP91 1061 aa27.3■■□□□ 1.96
RER1-204ENST00000378518 ILDR2Q71H61 639 aa27.3■■□□□ 1.96
RER1-204ENST00000378518 KIF24Q5T7B8 1368 aa27.3■■□□□ 1.96
RER1-204ENST00000378518 NPC1L1Q9UHC9 1359 aa27.3■■□□□ 1.96
RER1-204ENST00000378518 CRB1P82279 1406 aa27.3■■□□□ 1.96
RER1-204ENST00000378518 LARP1Q6PKG0 1096 aaKnown RBP27.29■■□□□ 1.96
RER1-204ENST00000378518 WDR17Q8IZU2 1322 aa27.29■■□□□ 1.96
RER1-204ENST00000378518 PEAK1Q9H792 1746 aa27.28■■□□□ 1.96
RER1-204ENST00000378518 SPATA31A1Q5TZJ5 1347 aa27.28■■□□□ 1.96
RER1-204ENST00000378518 HOXC9P31274 260 aa27.28■■□□□ 1.96
RER1-204ENST00000378518 TNNT2P45379 298 aaPredicted RBP27.28■■□□□ 1.96
RER1-204ENST00000378518 FLT4P35916 1363 aa27.27■■□□□ 1.96
RER1-204ENST00000378518 CC2D1BQ5T0F9 858 aaKnown RBP27.27■■□□□ 1.96
RER1-204ENST00000378518 TOM1L2Q6ZVM7 507 aa27.27■■□□□ 1.96
RER1-204ENST00000378518 RGS12O14924 1447 aa27.26■■□□□ 1.95
RER1-204ENST00000378518 ERBB3P21860 1342 aa27.25■■□□□ 1.95
RER1-204ENST00000378518 ANKRD24Q8TF21 1146 aa27.25■■□□□ 1.95
RER1-204ENST00000378518 USP35Q9P2H5 1018 aa27.25■■□□□ 1.95
RER1-204ENST00000378518 WNK3Q9BYP7 1800 aa27.25■■□□□ 1.95
RER1-204ENST00000378518 SMG6Q86US8 1419 aaKnown RBP27.24■■□□□ 1.95
RER1-204ENST00000378518 PPM1GO15355 546 aaPredicted RBP27.23■■□□□ 1.95
RER1-204ENST00000378518 EMILIN1Q9Y6C2 1016 aa27.23■■□□□ 1.95
RER1-204ENST00000378518 A0A0G2JS52 829 aa27.22■■□□□ 1.95
RER1-204ENST00000378518 ZNF316A6NFI3 1004 aaPredicted RBP27.22■■□□□ 1.95
RER1-204ENST00000378518 MYT1Q01538 1121 aa27.22■■□□□ 1.95
RER1-204ENST00000378518 DDX10Q13206 875 aaKnown RBP27.22■■□□□ 1.95
RER1-204ENST00000378518 TCP11L2Q8N4U5 519 aa27.22■■□□□ 1.95
RER1-204ENST00000378518 THRAP3Q9Y2W1 955 aaKnown RBP27.22■■□□□ 1.95
RER1-204ENST00000378518 CNGB1Q14028 1251 aaPredicted RBP27.21■■□□□ 1.95
RER1-204ENST00000378518 FAM98CQ17RN3 349 aaKnown RBP27.21■■□□□ 1.95
RER1-204ENST00000378518 LTV1Q96GA3 475 aaPredicted RBP27.21■■□□□ 1.95
RER1-204ENST00000378518 INSRP06213 1382 aa27.21■■□□□ 1.95
RER1-204ENST00000378518 THSD7AQ9UPZ6 1657 aa27.21■■□□□ 1.95
RER1-204ENST00000378518 POLKQ9UBT6 870 aa27.2■■□□□ 1.94
RER1-204ENST00000378518 BRWD3Q6RI45 1802 aa27.2■■□□□ 1.94
RER1-204ENST00000378518 RGPD2P0DJD1 1756 aa27.2■■□□□ 1.94
RER1-204ENST00000378518 BARGINQ6ZT62 677 aa27.19■■□□□ 1.94
RER1-204ENST00000378518 CARD10Q9BWT7 1032 aa27.19■■□□□ 1.94
RER1-204ENST00000378518 ONECUT3O60422 494 aaPredicted RBP27.18■■□□□ 1.94
RER1-204ENST00000378518 NLRP2Q9NX02 1062 aa27.18■■□□□ 1.94
RER1-204ENST00000378518 HSP90AB2PQ58FF8 381 aa27.17■■□□□ 1.94
RER1-204ENST00000378518 SEPT12Q8IYM1 358 aa27.17■■□□□ 1.94
RER1-204ENST00000378518 PARP4Q9UKK3 1724 aaKnown RBP27.16■■□□□ 1.94
RER1-204ENST00000378518 CDCA7Q9BWT1 371 aaPredicted RBP27.12■■□□□ 1.93
RER1-204ENST00000378518 LRRC37A3O60309 1634 aa27.09■■□□□ 1.93
RER1-204ENST00000378518 MTHFSP49914 203 aa27.07■■□□□ 1.92
RER1-204ENST00000378518 KRT27Q7Z3Y8 459 aa27.07■■□□□ 1.92
RER1-204ENST00000378518 DISP2A7MBM2 1401 aa27.07■■□□□ 1.92
RER1-204ENST00000378518 IL2RBP14784 551 aa27.05■■□□□ 1.92
RER1-204ENST00000378518 NBPF6Q5VWK0 638 aa27.05■■□□□ 1.92
RER1-204ENST00000378518 NBPF4Q96M43 638 aa27.05■■□□□ 1.92
RER1-204ENST00000378518 EIF4A2Q14240 407 aaKnown RBP27.04■■□□□ 1.92
RER1-204ENST00000378518 DDB1Q16531 1140 aa27.04■■□□□ 1.92
RER1-204ENST00000378518 PARD3Q8TEW0 1356 aa27.04■■□□□ 1.92
RER1-204ENST00000378518 PDE3BQ13370 1112 aa27.03■■□□□ 1.92
RER1-204ENST00000378518 USHBP1Q8N6Y0 703 aa27.01■■□□□ 1.91
RER1-204ENST00000378518 SOCS7O14512 581 aa27■■□□□ 1.91
RER1-204ENST00000378518 PPP2R1AP30153 589 aa27■■□□□ 1.91
RER1-204ENST00000378518 RALBP1Q15311 655 aa27■■□□□ 1.91
RER1-204ENST00000378518 TNS2Q63HR2 1409 aa26.99■■□□□ 1.91
RER1-204ENST00000378518 EXOC5O00471 708 aa26.99■■□□□ 1.91
RER1-204ENST00000378518 RAPGEF4Q8WZA2 1011 aa26.99■■□□□ 1.91
RER1-204ENST00000378518 CFAP53Q96M91 514 aa26.99■■□□□ 1.91
RER1-204ENST00000378518 EYA1Q99502 592 aa26.98■■□□□ 1.91
RER1-204ENST00000378518 RGPD1P0DJD0 1748 aa26.98■■□□□ 1.91
RER1-204ENST00000378518 NCAPD2Q15021 1401 aa26.98■■□□□ 1.91
RER1-204ENST00000378518 DIAPH1O60610 1272 aaKnown RBP26.96■■□□□ 1.91
RER1-204ENST00000378518 TATP17735 454 aaPredicted RBP26.96■■□□□ 1.91
RER1-204ENST00000378518 MEGF6O75095 1541 aa26.95■■□□□ 1.91
RER1-204ENST00000378518 IGSF1Q8N6C5 1336 aa26.95■■□□□ 1.91
RER1-204ENST00000378518 COL3A1P02461 1466 aaPredicted RBP26.94■■□□□ 1.9
RER1-204ENST00000378518 OVOS2A0A0G2JMS6 1433 aa26.94■■□□□ 1.9
RER1-204ENST00000378518 IL13P35225 146 aa26.94■■□□□ 1.9
RER1-204ENST00000378518 SHANK3Q9BYB0 1731 aa26.92■■□□□ 1.9
RER1-204ENST00000378518 PKD1L3Q7Z443 1732 aa26.91■■□□□ 1.9
RER1-204ENST00000378518 FAM182BQ5T319 152 aa26.91■■□□□ 1.9
RER1-204ENST00000378518 FAM196AQ6ZSG2 479 aa26.91■■□□□ 1.9
RER1-204ENST00000378518 MYBBP1AQ9BQG0 1328 aaKnown RBP26.9■■□□□ 1.9
RER1-204ENST00000378518 ZCRB1Q8TBF4 217 aaKnown RBP26.89■■□□□ 1.9
RER1-204ENST00000378518 PLEKHG2Q9H7P9 1386 aa26.88■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms