RNA–Protein interactions for RNA: ENST00000377036.2

DFFA-201, Transcript of DNA fragmentation factor subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene DFFA, Length 1,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFA-201ENST00000377036 MEX3CQ5U5Q3 659 aaKnown RBP23.15■■□□□ 1.3
DFFA-201ENST00000377036 CHRNA2Q15822 529 aa23.13■■□□□ 1.29
DFFA-201ENST00000377036 MIER1Q8N108 512 aa23.13■■□□□ 1.29
DFFA-201ENST00000377036 NUDCQ9Y266 331 aa23.13■■□□□ 1.29
DFFA-201ENST00000377036 HSP90AB2PQ58FF8 381 aa23.12■■□□□ 1.29
DFFA-201ENST00000377036 DIAPH1O60610 1272 aaKnown RBP23.11■■□□□ 1.29
DFFA-201ENST00000377036 NGLY1Q96IV0 654 aa23.11■■□□□ 1.29
DFFA-201ENST00000377036 COL14A1Q05707 1796 aaKnown RBP23.11■■□□□ 1.29
DFFA-201ENST00000377036 MRS2Q9HD23 443 aa23.1■■□□□ 1.29
DFFA-201ENST00000377036 LRP6O75581 1613 aa23.1■■□□□ 1.29
DFFA-201ENST00000377036 C8orf37Q96NL8 207 aa23.09■■□□□ 1.29
DFFA-201ENST00000377036 MAP2P11137 1827 aaKnown RBP23.09■■□□□ 1.29
DFFA-201ENST00000377036 EVA1CP58658 441 aa23.08■■□□□ 1.29
DFFA-201ENST00000377036 FNBP4Q8N3X1 1017 aaPredicted RBP23.08■■□□□ 1.29
DFFA-201ENST00000377036 AXIN2Q9Y2T1 843 aa23.08■■□□□ 1.29
DFFA-201ENST00000377036 ERBB3P21860 1342 aa23.08■■□□□ 1.29
DFFA-201ENST00000377036 LTN1O94822 1766 aa23.08■■□□□ 1.29
DFFA-201ENST00000377036 ANKRD24Q8TF21 1146 aa23.08■■□□□ 1.28
DFFA-201ENST00000377036 BTG4Q9NY30 223 aa23.08■■□□□ 1.28
DFFA-201ENST00000377036 PEAK1Q9H792 1746 aa23.06■■□□□ 1.28
DFFA-201ENST00000377036 CSB-PGBD3P0DP91 1061 aa23.06■■□□□ 1.28
DFFA-201ENST00000377036 EIF4A2Q14240 407 aaKnown RBP23.06■■□□□ 1.28
DFFA-201ENST00000377036 ILDR1Q86SU0 546 aaPredicted RBP23.06■■□□□ 1.28
DFFA-201ENST00000377036 SLIT2O94813 1529 aa23.06■■□□□ 1.28
DFFA-201ENST00000377036 LMO7Q8WWI1 1683 aa23.05■■□□□ 1.28
DFFA-201ENST00000377036 IL13P35225 146 aa23.05■■□□□ 1.28
DFFA-201ENST00000377036 WDR17Q8IZU2 1322 aa23.05■■□□□ 1.28
DFFA-201ENST00000377036 COL3A1P02461 1466 aaPredicted RBP23.05■■□□□ 1.28
DFFA-201ENST00000377036 COL5A2P05997 1499 aaPredicted RBP23.05■■□□□ 1.28
DFFA-201ENST00000377036 CAMTA1Q9Y6Y1 1673 aa23.04■■□□□ 1.28
DFFA-201ENST00000377036 WDR43Q15061 677 aaKnown RBP eCLIP23.04■■□□□ 1.28
DFFA-201ENST00000377036 COL18A1P39060 1754 aa23.03■■□□□ 1.28
DFFA-201ENST00000377036 UNC5CLQ8IV45 518 aa23.03■■□□□ 1.28
DFFA-201ENST00000377036 LTV1Q96GA3 475 aaPredicted RBP23.03■■□□□ 1.28
DFFA-201ENST00000377036 PNNQ9H307 717 aaKnown RBP23.01■■□□□ 1.27
DFFA-201ENST00000377036 STRN4Q9NRL3 753 aa23■■□□□ 1.27
DFFA-201ENST00000377036 USP21Q9UK80 565 aa23■■□□□ 1.27
DFFA-201ENST00000377036 NWD2Q9ULI1 1742 aa23■■□□□ 1.27
DFFA-201ENST00000377036 U2SURPO15042 1029 aaKnown RBP22.99■■□□□ 1.27
DFFA-201ENST00000377036 TOM1L2Q6ZVM7 507 aa22.99■■□□□ 1.27
DFFA-201ENST00000377036 NLRP2Q9NX02 1062 aa22.99■■□□□ 1.27
DFFA-201ENST00000377036 AFF2P51816 1311 aa22.99■■□□□ 1.27
DFFA-201ENST00000377036 IGSF1Q8N6C5 1336 aa22.99■■□□□ 1.27
DFFA-201ENST00000377036 U2AF1L5P0DN76 240 aaPredicted RBP22.99■■□□□ 1.27
DFFA-201ENST00000377036 U2AF1Q01081 240 aaKnown RBP eCLIP22.99■■□□□ 1.27
DFFA-201ENST00000377036 PNISRQ8TF01 805 aaKnown RBP22.99■■□□□ 1.27
DFFA-201ENST00000377036 CARD10Q9BWT7 1032 aa22.99■■□□□ 1.27
DFFA-201ENST00000377036 CRB1P82279 1406 aa22.98■■□□□ 1.27
DFFA-201ENST00000377036 ZNF772Q68DY9 489 aaPredicted RBP22.98■■□□□ 1.27
DFFA-201ENST00000377036 EYA1Q99502 592 aa22.98■■□□□ 1.27
DFFA-201ENST00000377036 BCL9LQ86UU0 1499 aa22.97■■□□□ 1.27
DFFA-201ENST00000377036 VPS72Q15906 364 aa22.97■■□□□ 1.27
DFFA-201ENST00000377036 CCDC184Q52MB2 194 aa22.97■■□□□ 1.27
DFFA-201ENST00000377036 PLCH1Q4KWH8 1693 aa22.97■■□□□ 1.27
DFFA-201ENST00000377036 FAM208AQ9UK61 1670 aaKnown RBP22.97■■□□□ 1.27
DFFA-201ENST00000377036 FCHSD2O94868 740 aa22.96■■□□□ 1.27
DFFA-201ENST00000377036 LARP1Q6PKG0 1096 aaKnown RBP22.96■■□□□ 1.27
DFFA-201ENST00000377036 THRAP3Q9Y2W1 955 aaKnown RBP22.96■■□□□ 1.27
DFFA-201ENST00000377036 PLEKHG2Q9H7P9 1386 aa22.96■■□□□ 1.27
DFFA-201ENST00000377036 NBPF6Q5VWK0 638 aa22.95■■□□□ 1.26
DFFA-201ENST00000377036 NBPF4Q96M43 638 aa22.95■■□□□ 1.26
DFFA-201ENST00000377036 TRPC5Q9UL62 973 aaPredicted RBP22.95■■□□□ 1.26
DFFA-201ENST00000377036 KDRP35968 1356 aa22.94■■□□□ 1.26
DFFA-201ENST00000377036 NCAPD2Q15021 1401 aa22.94■■□□□ 1.26
DFFA-201ENST00000377036 NEFMP07197 916 aa22.93■■□□□ 1.26
DFFA-201ENST00000377036 SULT6B1Q6IMI4 303 aa22.92■■□□□ 1.26
DFFA-201ENST00000377036 TCP11L2Q8N4U5 519 aa22.92■■□□□ 1.26
DFFA-201ENST00000377036 CDCA7Q9BWT1 371 aaPredicted RBP22.92■■□□□ 1.26
DFFA-201ENST00000377036 SPATA31A5Q5VU36 1347 aa22.92■■□□□ 1.26
DFFA-201ENST00000377036 SPATA31A7Q8IWB4 1347 aa22.92■■□□□ 1.26
DFFA-201ENST00000377036 CCDC9Q9Y3X0 531 aaKnown RBP22.91■■□□□ 1.26
DFFA-201ENST00000377036 SPATA31A1Q5TZJ5 1347 aa22.91■■□□□ 1.26
DFFA-201ENST00000377036 NRAPQ86VF7 1730 aa22.91■■□□□ 1.26
DFFA-201ENST00000377036 RAPGEF4Q8WZA2 1011 aa22.91■■□□□ 1.26
DFFA-201ENST00000377036 ADAMTS8Q9UP79 889 aa22.91■■□□□ 1.26
DFFA-201ENST00000377036 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.9■■□□□ 1.26
DFFA-201ENST00000377036 PHF23Q9BUL5 403 aaPredicted RBP22.9■■□□□ 1.26
DFFA-201ENST00000377036 ATRNO75882 1429 aa22.89■■□□□ 1.25
DFFA-201ENST00000377036 FAM9BQ8IZU0 186 aa22.89■■□□□ 1.25
DFFA-201ENST00000377036 RGPD1P0DJD0 1748 aa22.88■■□□□ 1.25
DFFA-201ENST00000377036 BARGINQ6ZT62 677 aa22.88■■□□□ 1.25
DFFA-201ENST00000377036 RSPH6AQ9H0K4 717 aa22.88■■□□□ 1.25
DFFA-201ENST00000377036 RGPD5Q99666 1765 aa22.87■■□□□ 1.25
DFFA-201ENST00000377036 HMOX1P09601 288 aa22.87■■□□□ 1.25
DFFA-201ENST00000377036 IL2RBP14784 551 aa22.87■■□□□ 1.25
DFFA-201ENST00000377036 GJD4Q96KN9 370 aaPredicted RBP22.87■■□□□ 1.25
DFFA-201ENST00000377036 QTRT2Q9H974 415 aaKnown RBP22.87■■□□□ 1.25
DFFA-201ENST00000377036 TATP17735 454 aaPredicted RBP22.86■■□□□ 1.25
DFFA-201ENST00000377036 USHBP1Q8N6Y0 703 aa22.86■■□□□ 1.25
DFFA-201ENST00000377036 USP35Q9P2H5 1018 aa22.86■■□□□ 1.25
DFFA-201ENST00000377036 AMOTQ4VCS5 1084 aa22.85■■□□□ 1.25
DFFA-201ENST00000377036 AEBP1Q8IUX7 1158 aa22.85■■□□□ 1.25
DFFA-201ENST00000377036 RUNDC1Q96C34 613 aa22.85■■□□□ 1.25
DFFA-201ENST00000377036 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.85■■□□□ 1.255e-7■□□□□ 9.3
DFFA-201ENST00000377036 MAPK8IP3Q9UPT6 1336 aa22.85■■□□□ 1.25
DFFA-201ENST00000377036 PRKAR2BP31323 418 aa22.84■■□□□ 1.25
DFFA-201ENST00000377036 PLEKHO1Q53GL0 409 aaPredicted RBP22.82■■□□□ 1.24
DFFA-201ENST00000377036 PLEKHF1Q96S99 279 aa22.82■■□□□ 1.24
DFFA-201ENST00000377036 SPG7Q9UQ90 795 aa22.82■■□□□ 1.24
DFFA-201ENST00000377036 RBM6P78332 1123 aaKnown RBP22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms