RNA–Protein interactions for RNA: ENST00000376575.7

DDR1-228, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best) BASIC

Gene DDR1, Length 732 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-228ENST00000376575 VPS72Q15906 364 aa27.23■■□□□ 1.95
DDR1-228ENST00000376575 COL5A2P05997 1499 aaPredicted RBP27.23■■□□□ 1.95
DDR1-228ENST00000376575 RGPD5Q99666 1765 aa27.22■■□□□ 1.95
DDR1-228ENST00000376575 KIF24Q5T7B8 1368 aa27.21■■□□□ 1.95
DDR1-228ENST00000376575 RRS1Q15050 365 aaKnown RBP27.2■■□□□ 1.94
DDR1-228ENST00000376575 IP6K1Q92551 441 aa27.2■■□□□ 1.94
DDR1-228ENST00000376575 MAP2P11137 1827 aaKnown RBP27.2■■□□□ 1.94
DDR1-228ENST00000376575 RTL1A6NKG5 1358 aa27.19■■□□□ 1.94
DDR1-228ENST00000376575 BLMP54132 1417 aaPredicted RBP27.18■■□□□ 1.94
DDR1-228ENST00000376575 DDX10Q13206 875 aaKnown RBP27.18■■□□□ 1.94
DDR1-228ENST00000376575 PEAK1Q9H792 1746 aa27.18■■□□□ 1.94
DDR1-228ENST00000376575 ZBTB7CA1YPR0 619 aa27.17■■□□□ 1.94
DDR1-228ENST00000376575 MORC1Q86VD1 984 aa27.17■■□□□ 1.94
DDR1-228ENST00000376575 GJD4Q96KN9 370 aaPredicted RBP27.17■■□□□ 1.94
DDR1-228ENST00000376575 HOXC9P31274 260 aa27.16■■□□□ 1.94
DDR1-228ENST00000376575 RBM6P78332 1123 aaKnown RBP27.16■■□□□ 1.94
DDR1-228ENST00000376575 POLKQ9UBT6 870 aa27.16■■□□□ 1.94
DDR1-228ENST00000376575 GLI3P10071 1580 aa27.16■■□□□ 1.94
DDR1-228ENST00000376575 SMG6Q86US8 1419 aaKnown RBP27.16■■□□□ 1.94
DDR1-228ENST00000376575 SPATA31A5Q5VU36 1347 aa27.16■■□□□ 1.94
DDR1-228ENST00000376575 SPATA31A7Q8IWB4 1347 aa27.16■■□□□ 1.94
DDR1-228ENST00000376575 CC2D1BQ5T0F9 858 aaKnown RBP27.15■■□□□ 1.94
DDR1-228ENST00000376575 RXRBP28702 533 aa27.14■■□□□ 1.94
DDR1-228ENST00000376575 EMILIN1Q9Y6C2 1016 aa27.14■■□□□ 1.94
DDR1-228ENST00000376575 ERBB3P21860 1342 aa27.14■■□□□ 1.93
DDR1-228ENST00000376575 AMPHP49418 695 aa27.13■■□□□ 1.93
DDR1-228ENST00000376575 EVA1CP58658 441 aa27.13■■□□□ 1.93
DDR1-228ENST00000376575 LARP1Q6PKG0 1096 aaKnown RBP27.13■■□□□ 1.93
DDR1-228ENST00000376575 STRN4Q9NRL3 753 aa27.13■■□□□ 1.93
DDR1-228ENST00000376575 WDR17Q8IZU2 1322 aa27.13■■□□□ 1.93
DDR1-228ENST00000376575 CDK12Q9NYV4 1490 aaPredicted RBP27.13■■□□□ 1.93
DDR1-228ENST00000376575 FLT4P35916 1363 aa27.12■■□□□ 1.93
DDR1-228ENST00000376575 SPATA31A1Q5TZJ5 1347 aa27.12■■□□□ 1.93
DDR1-228ENST00000376575 ONECUT3O60422 494 aaPredicted RBP27.11■■□□□ 1.93
DDR1-228ENST00000376575 INSRP06213 1382 aa27.1■■□□□ 1.93
DDR1-228ENST00000376575 CRB1P82279 1406 aa27.1■■□□□ 1.93
DDR1-228ENST00000376575 TNNT2P45379 298 aaPredicted RBP27.1■■□□□ 1.93
DDR1-228ENST00000376575 HSP90AB2PQ58FF8 381 aa27.08■■□□□ 1.93
DDR1-228ENST00000376575 ANKRD24Q8TF21 1146 aa27.08■■□□□ 1.93
DDR1-228ENST00000376575 ILDR2Q71H61 639 aa27.06■■□□□ 1.92
DDR1-228ENST00000376575 CARD10Q9BWT7 1032 aa27.06■■□□□ 1.92
DDR1-228ENST00000376575 FAM208AQ9UK61 1670 aaKnown RBP27.05■■□□□ 1.92
DDR1-228ENST00000376575 THRAP3Q9Y2W1 955 aaKnown RBP27.05■■□□□ 1.92
DDR1-228ENST00000376575 BARGINQ6ZT62 677 aa27.04■■□□□ 1.92
DDR1-228ENST00000376575 CCDC9Q9Y3X0 531 aaKnown RBP27.04■■□□□ 1.92
DDR1-228ENST00000376575 PARD3Q8TEW0 1356 aa27.04■■□□□ 1.92
DDR1-228ENST00000376575 RGS12O14924 1447 aa27.04■■□□□ 1.92
DDR1-228ENST00000376575 TOM1L2Q6ZVM7 507 aa27.03■■□□□ 1.92
DDR1-228ENST00000376575 TCP11L2Q8N4U5 519 aa27.03■■□□□ 1.92
DDR1-228ENST00000376575 THSD7AQ9UPZ6 1657 aa27.01■■□□□ 1.92
DDR1-228ENST00000376575 PPM1GO15355 546 aaPredicted RBP27.01■■□□□ 1.91
DDR1-228ENST00000376575 CSB-PGBD3P0DP91 1061 aa27.01■■□□□ 1.91
DDR1-228ENST00000376575 MTHFSP49914 203 aa27■■□□□ 1.91
DDR1-228ENST00000376575 RGPD2P0DJD1 1756 aa26.99■■□□□ 1.91
DDR1-228ENST00000376575 FAM98CQ17RN3 349 aaKnown RBP26.98■■□□□ 1.91
DDR1-228ENST00000376575 LTV1Q96GA3 475 aaPredicted RBP26.98■■□□□ 1.91
DDR1-228ENST00000376575 USP35Q9P2H5 1018 aa26.98■■□□□ 1.91
DDR1-228ENST00000376575 NCAPD2Q15021 1401 aa26.98■■□□□ 1.91
DDR1-228ENST00000376575 CNGB1Q14028 1251 aaPredicted RBP26.97■■□□□ 1.91
DDR1-228ENST00000376575 DISP2A7MBM2 1401 aa26.97■■□□□ 1.91
DDR1-228ENST00000376575 WNK3Q9BYP7 1800 aa26.97■■□□□ 1.91
DDR1-228ENST00000376575 PPP2R1AP30153 589 aa26.96■■□□□ 1.91
DDR1-228ENST00000376575 NLRP2Q9NX02 1062 aa26.96■■□□□ 1.91
DDR1-228ENST00000376575 EIF4A2Q14240 407 aaKnown RBP26.95■■□□□ 1.9
DDR1-228ENST00000376575 RALBP1Q15311 655 aa26.95■■□□□ 1.9
DDR1-228ENST00000376575 NBPF6Q5VWK0 638 aa26.95■■□□□ 1.9
DDR1-228ENST00000376575 SEPT12Q8IYM1 358 aa26.95■■□□□ 1.9
DDR1-228ENST00000376575 NBPF4Q96M43 638 aa26.95■■□□□ 1.9
DDR1-228ENST00000376575 PARP4Q9UKK3 1724 aaKnown RBP26.94■■□□□ 1.9
DDR1-228ENST00000376575 BRWD3Q6RI45 1802 aa26.93■■□□□ 1.9
DDR1-228ENST00000376575 COL3A1P02461 1466 aaPredicted RBP26.93■■□□□ 1.9
DDR1-228ENST00000376575 CDCA7Q9BWT1 371 aaPredicted RBP26.92■■□□□ 1.9
DDR1-228ENST00000376575 IL13P35225 146 aa26.91■■□□□ 1.9
DDR1-228ENST00000376575 EYA1Q99502 592 aa26.9■■□□□ 1.9
DDR1-228ENST00000376575 RGPD1P0DJD0 1748 aa26.9■■□□□ 1.9
DDR1-228ENST00000376575 PRKRIP1Q9H875 184 aaPredicted RBP26.88■■□□□ 1.89
DDR1-228ENST00000376575 IGSF1Q8N6C5 1336 aa26.88■■□□□ 1.89
DDR1-228ENST00000376575 LRRC37A3O60309 1634 aa26.87■■□□□ 1.89
DDR1-228ENST00000376575 IL2RBP14784 551 aa26.86■■□□□ 1.89
DDR1-228ENST00000376575 USHBP1Q8N6Y0 703 aa26.84■■□□□ 1.89
DDR1-228ENST00000376575 EP400Q96L91 3159 aa26.83■■□□□ 1.89
DDR1-228ENST00000376575 DIAPH1O60610 1272 aaKnown RBP26.83■■□□□ 1.89
DDR1-228ENST00000376575 MEGF6O75095 1541 aa26.83■■□□□ 1.89
DDR1-228ENST00000376575 KRT27Q7Z3Y8 459 aa26.82■■□□□ 1.88
DDR1-228ENST00000376575 MYBBP1AQ9BQG0 1328 aaKnown RBP26.82■■□□□ 1.88
DDR1-228ENST00000376575 KDRP35968 1356 aa26.82■■□□□ 1.88
DDR1-228ENST00000376575 OVOS2A0A0G2JMS6 1433 aa26.82■■□□□ 1.88
DDR1-228ENST00000376575 PLEKHG2Q9H7P9 1386 aa26.81■■□□□ 1.88
DDR1-228ENST00000376575 TNS2Q63HR2 1409 aa26.81■■□□□ 1.88
DDR1-228ENST00000376575 A0A0G2JS52 829 aa26.8■■□□□ 1.88
DDR1-228ENST00000376575 MYT1Q01538 1121 aa26.8■■□□□ 1.88
DDR1-228ENST00000376575 DDB1Q16531 1140 aa26.8■■□□□ 1.88
DDR1-228ENST00000376575 CFAP53Q96M91 514 aa26.79■■□□□ 1.88
DDR1-228ENST00000376575 EXOC5O00471 708 aa26.77■■□□□ 1.88
DDR1-228ENST00000376575 SHANK3Q9BYB0 1731 aa26.76■■□□□ 1.88
DDR1-228ENST00000376575 RAPGEF4Q8WZA2 1011 aa26.76■■□□□ 1.87
DDR1-228ENST00000376575 PDE3BQ13370 1112 aa26.75■■□□□ 1.87
DDR1-228ENST00000376575 PKD1L3Q7Z443 1732 aa26.75■■□□□ 1.87
DDR1-228ENST00000376575 BCL9O00512 1426 aa26.74■■□□□ 1.87
DDR1-228ENST00000376575 TATP17735 454 aaPredicted RBP26.74■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms