RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 ZNF772Q68DY9 489 aaPredicted RBP20.46■□□□□ 0.87
HSPG2-201ENST00000374673 BTG4Q9NY30 223 aa20.46■□□□□ 0.87
HSPG2-201ENST00000374673 RGS17Q9UGC6 210 aaPredicted RBP20.46■□□□□ 0.87
HSPG2-201ENST00000374673 COL5A2P05997 1499 aaPredicted RBP20.45■□□□□ 0.86
HSPG2-201ENST00000374673 RRS1Q15050 365 aaKnown RBP20.45■□□□□ 0.86
HSPG2-201ENST00000374673 UNC5CLQ8IV45 518 aa20.45■□□□□ 0.86
HSPG2-201ENST00000374673 BLMP54132 1417 aaPredicted RBP20.44■□□□□ 0.86
HSPG2-201ENST00000374673 SMG6Q86US8 1419 aaKnown RBP20.44■□□□□ 0.86
HSPG2-201ENST00000374673 AXIN2Q9Y2T1 843 aa20.43■□□□□ 0.86
HSPG2-201ENST00000374673 ATRNO75882 1429 aa20.43■□□□□ 0.86
HSPG2-201ENST00000374673 TNNT2P45379 298 aaPredicted RBP20.42■□□□□ 0.86
HSPG2-201ENST00000374673 IP6K1Q92551 441 aa20.42■□□□□ 0.86
HSPG2-201ENST00000374673 POLKQ9UBT6 870 aa20.42■□□□□ 0.86
HSPG2-201ENST00000374673 FLT4P35916 1363 aa20.42■□□□□ 0.86
HSPG2-201ENST00000374673 FAM208AQ9UK61 1670 aaKnown RBP20.42■□□□□ 0.86
HSPG2-201ENST00000374673 HOXC9P31274 260 aa20.41■□□□□ 0.86
HSPG2-201ENST00000374673 AMPHP49418 695 aa20.41■□□□□ 0.86
HSPG2-201ENST00000374673 TRPC5Q9UL62 973 aaPredicted RBP20.41■□□□□ 0.86
HSPG2-201ENST00000374673 EMILIN1Q9Y6C2 1016 aa20.41■□□□□ 0.86
HSPG2-201ENST00000374673 PARD3Q8TEW0 1356 aa20.4■□□□□ 0.86
HSPG2-201ENST00000374673 CNGB1Q14028 1251 aaPredicted RBP20.39■□□□□ 0.85
HSPG2-201ENST00000374673 VPS72Q15906 364 aa20.39■□□□□ 0.85
HSPG2-201ENST00000374673 CDK12Q9NYV4 1490 aaPredicted RBP20.38■□□□□ 0.85
HSPG2-201ENST00000374673 INSRP06213 1382 aa20.38■□□□□ 0.85
HSPG2-201ENST00000374673 ERBB3P21860 1342 aa20.38■□□□□ 0.85
HSPG2-201ENST00000374673 GLI3P10071 1580 aa20.38■□□□□ 0.85
HSPG2-201ENST00000374673 WDR17Q8IZU2 1322 aa20.37■□□□□ 0.85
HSPG2-201ENST00000374673 EVA1CP58658 441 aa20.37■□□□□ 0.85
HSPG2-201ENST00000374673 QTRT2Q9H974 415 aaKnown RBP20.37■□□□□ 0.85
HSPG2-201ENST00000374673 STRN4Q9NRL3 753 aa20.37■□□□□ 0.85
HSPG2-201ENST00000374673 CRB1P82279 1406 aa20.36■□□□□ 0.85
HSPG2-201ENST00000374673 POTEAQ6S8J7 498 aa20.36■□□□□ 0.85
HSPG2-201ENST00000374673 LARP1Q6PKG0 1096 aaKnown RBP20.35■□□□□ 0.85
HSPG2-201ENST00000374673 ANKRD24Q8TF21 1146 aa20.35■□□□□ 0.85
HSPG2-201ENST00000374673 RGPD2P0DJD1 1756 aa20.34■□□□□ 0.85
HSPG2-201ENST00000374673 SPATA31A5Q5VU36 1347 aa20.34■□□□□ 0.85
HSPG2-201ENST00000374673 SPATA31A7Q8IWB4 1347 aa20.34■□□□□ 0.85
HSPG2-201ENST00000374673 PPM1GO15355 546 aaPredicted RBP20.34■□□□□ 0.85
HSPG2-201ENST00000374673 RALBP1Q15311 655 aa20.34■□□□□ 0.85
HSPG2-201ENST00000374673 HSP90AB2PQ58FF8 381 aa20.34■□□□□ 0.85
HSPG2-201ENST00000374673 GJD4Q96KN9 370 aaPredicted RBP20.34■□□□□ 0.85
HSPG2-201ENST00000374673 WNK3Q9BYP7 1800 aa20.34■□□□□ 0.85
HSPG2-201ENST00000374673 SPATA31A1Q5TZJ5 1347 aa20.32■□□□□ 0.84
HSPG2-201ENST00000374673 CSB-PGBD3P0DP91 1061 aa20.32■□□□□ 0.84
HSPG2-201ENST00000374673 PPP2R1AP30153 589 aa20.32■□□□□ 0.84
HSPG2-201ENST00000374673 MTHFSP49914 203 aa20.32■□□□□ 0.84
HSPG2-201ENST00000374673 RBM6P78332 1123 aaKnown RBP20.32■□□□□ 0.84
HSPG2-201ENST00000374673 TOM1L2Q6ZVM7 507 aa20.31■□□□□ 0.84
HSPG2-201ENST00000374673 CCDC9Q9Y3X0 531 aaKnown RBP20.31■□□□□ 0.84
HSPG2-201ENST00000374673 LTV1Q96GA3 475 aaPredicted RBP20.3■□□□□ 0.84
HSPG2-201ENST00000374673 PRKRIP1Q9H875 184 aaPredicted RBP20.3■□□□□ 0.84
HSPG2-201ENST00000374673 RXRBP28702 533 aa20.29■□□□□ 0.84
HSPG2-201ENST00000374673 CARD10Q9BWT7 1032 aa20.29■□□□□ 0.84
HSPG2-201ENST00000374673 COL3A1P02461 1466 aaPredicted RBP20.29■□□□□ 0.84
HSPG2-201ENST00000374673 THSD7AQ9UPZ6 1657 aa20.29■□□□□ 0.84
HSPG2-201ENST00000374673 THRAP3Q9Y2W1 955 aaKnown RBP20.28■□□□□ 0.84
HSPG2-201ENST00000374673 EIF4A2Q14240 407 aaKnown RBP20.27■□□□□ 0.84
HSPG2-201ENST00000374673 TCP11L2Q8N4U5 519 aa20.27■□□□□ 0.84
HSPG2-201ENST00000374673 RGPD1P0DJD0 1748 aa20.27■□□□□ 0.83
HSPG2-201ENST00000374673 MYBBP1AQ9BQG0 1328 aaKnown RBP20.27■□□□□ 0.83
HSPG2-201ENST00000374673 BARGINQ6ZT62 677 aa20.26■□□□□ 0.83
HSPG2-201ENST00000374673 NLRP2Q9NX02 1062 aa20.26■□□□□ 0.83
HSPG2-201ENST00000374673 USP35Q9P2H5 1018 aa20.26■□□□□ 0.83
HSPG2-201ENST00000374673 NCAPD2Q15021 1401 aa20.26■□□□□ 0.83
HSPG2-201ENST00000374673 PARP4Q9UKK3 1724 aaKnown RBP20.25■□□□□ 0.83
HSPG2-201ENST00000374673 ONECUT3O60422 494 aaPredicted RBP20.25■□□□□ 0.83
HSPG2-201ENST00000374673 NBPF6Q5VWK0 638 aa20.24■□□□□ 0.83
HSPG2-201ENST00000374673 NBPF4Q96M43 638 aa20.24■□□□□ 0.83
HSPG2-201ENST00000374673 DISP2A7MBM2 1401 aa20.24■□□□□ 0.83
HSPG2-201ENST00000374673 RGS12O14924 1447 aa20.24■□□□□ 0.83
HSPG2-201ENST00000374673 IL13P35225 146 aa20.23■□□□□ 0.83
HSPG2-201ENST00000374673 CFAP53Q96M91 514 aa20.23■□□□□ 0.83
HSPG2-201ENST00000374673 ANP32CO43423 234 aa20.22■□□□□ 0.83
HSPG2-201ENST00000374673 FAM98CQ17RN3 349 aaKnown RBP20.22■□□□□ 0.83
HSPG2-201ENST00000374673 EYA1Q99502 592 aa20.22■□□□□ 0.83
HSPG2-201ENST00000374673 BRWD3Q6RI45 1802 aa20.22■□□□□ 0.83
HSPG2-201ENST00000374673 IGSF1Q8N6C5 1336 aa20.22■□□□□ 0.83
HSPG2-201ENST00000374673 LRRC37A3O60309 1634 aa20.21■□□□□ 0.83
HSPG2-201ENST00000374673 DIAPH1O60610 1272 aaKnown RBP20.21■□□□□ 0.83
HSPG2-201ENST00000374673 CDCA7Q9BWT1 371 aaPredicted RBP20.21■□□□□ 0.83
HSPG2-201ENST00000374673 IL2RBP14784 551 aa20.18■□□□□ 0.82
HSPG2-201ENST00000374673 SEPT12Q8IYM1 358 aa20.18■□□□□ 0.82
HSPG2-201ENST00000374673 USHBP1Q8N6Y0 703 aa20.18■□□□□ 0.82
HSPG2-201ENST00000374673 MEGF6O75095 1541 aa20.17■□□□□ 0.82
HSPG2-201ENST00000374673 KDRP35968 1356 aa20.16■□□□□ 0.82
HSPG2-201ENST00000374673 A0A0G2JS52 829 aa20.15■□□□□ 0.82
HSPG2-201ENST00000374673 MYT1Q01538 1121 aa20.15■□□□□ 0.82
HSPG2-201ENST00000374673 PLEKHG2Q9H7P9 1386 aa20.15■□□□□ 0.82
HSPG2-201ENST00000374673 PKD1L3Q7Z443 1732 aa20.15■□□□□ 0.82
HSPG2-201ENST00000374673 SHANK3Q9BYB0 1731 aa20.15■□□□□ 0.82
HSPG2-201ENST00000374673 OVOS2A0A0G2JMS6 1433 aa20.14■□□□□ 0.81
HSPG2-201ENST00000374673 TNS2Q63HR2 1409 aa20.14■□□□□ 0.81
HSPG2-201ENST00000374673 NUDCQ9Y266 331 aa20.14■□□□□ 0.81
HSPG2-201ENST00000374673 RAPGEF4Q8WZA2 1011 aa20.13■□□□□ 0.81
HSPG2-201ENST00000374673 TATP17735 454 aaPredicted RBP20.12■□□□□ 0.81
HSPG2-201ENST00000374673 DDB1Q16531 1140 aa20.12■□□□□ 0.81
HSPG2-201ENST00000374673 SULT6B1Q6IMI4 303 aa20.12■□□□□ 0.81
HSPG2-201ENST00000374673 U2SURPO15042 1029 aaKnown RBP20.11■□□□□ 0.81
HSPG2-201ENST00000374673 DIEXFQ68CQ4 756 aaKnown RBP20.11■□□□□ 0.81
HSPG2-201ENST00000374673 ILDR2Q71H61 639 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms