RNA–Protein interactions for RNA: ENST00000373484.4

SYNC-201, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNC, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-201ENST00000373484 PER1O15534 1290 aaPredicted RBP27.74■■■□□ 2.03
SYNC-201ENST00000373484 NSD2O96028 1365 aa27.74■■■□□ 2.03
SYNC-201ENST00000373484 AATKQ6ZMQ8 1374 aa27.74■■■□□ 2.03
SYNC-201ENST00000373484 ATRNO75882 1429 aa27.74■■■□□ 2.03
SYNC-201ENST00000373484 ZBTB7CA1YPR0 619 aa27.71■■■□□ 2.03
SYNC-201ENST00000373484 DDX10Q13206 875 aaKnown RBP27.71■■■□□ 2.03
SYNC-201ENST00000373484 QTRT2Q9H974 415 aaKnown RBP27.71■■■□□ 2.03
SYNC-201ENST00000373484 TRPC5Q9UL62 973 aaPredicted RBP27.71■■■□□ 2.03
SYNC-201ENST00000373484 MAP2P11137 1827 aaKnown RBP27.7■■■□□ 2.03
SYNC-201ENST00000373484 AMER1Q5JTC6 1135 aaPredicted RBP27.69■■■□□ 2.02
SYNC-201ENST00000373484 COL5A2P05997 1499 aaPredicted RBP27.68■■■□□ 2.02
SYNC-201ENST00000373484 FBLN1P23142 703 aa27.67■■■□□ 2.02
SYNC-201ENST00000373484 ANP32CO43423 234 aa27.65■■■□□ 2.02
SYNC-201ENST00000373484 VPS72Q15906 364 aa27.65■■■□□ 2.02
SYNC-201ENST00000373484 AXIN2Q9Y2T1 843 aa27.65■■■□□ 2.02
SYNC-201ENST00000373484 GLI3P10071 1580 aa27.65■■■□□ 2.02
SYNC-201ENST00000373484 MAP3K19Q56UN5 1328 aa27.64■■■□□ 2.02
SYNC-201ENST00000373484 NPC1L1Q9UHC9 1359 aa27.64■■■□□ 2.01
SYNC-201ENST00000373484 PEAK1Q9H792 1746 aa27.63■■■□□ 2.01
SYNC-201ENST00000373484 RBM6P78332 1123 aaKnown RBP27.62■■■□□ 2.01
SYNC-201ENST00000373484 RRS1Q15050 365 aaKnown RBP27.62■■■□□ 2.01
SYNC-201ENST00000373484 RXRBP28702 533 aa27.62■■■□□ 2.01
SYNC-201ENST00000373484 GJD4Q96KN9 370 aaPredicted RBP27.62■■■□□ 2.01
SYNC-201ENST00000373484 STRN4Q9NRL3 753 aa27.62■■■□□ 2.01
SYNC-201ENST00000373484 BLMP54132 1417 aaPredicted RBP27.6■■■□□ 2.01
SYNC-201ENST00000373484 RTL1A6NKG5 1358 aa27.6■■■□□ 2.01
SYNC-201ENST00000373484 EVA1CP58658 441 aa27.6■■■□□ 2.01
SYNC-201ENST00000373484 NEFLP07196 543 aa27.6■■■□□ 2.01
SYNC-201ENST00000373484 IP6K1Q92551 441 aa27.6■■■□□ 2.01
SYNC-201ENST00000373484 MORC1Q86VD1 984 aa27.59■■■□□ 2.01
SYNC-201ENST00000373484 KIF24Q5T7B8 1368 aa27.58■■■□□ 2.01
SYNC-201ENST00000373484 CDK12Q9NYV4 1490 aaPredicted RBP27.58■■■□□ 2.01
SYNC-201ENST00000373484 SPATA31A5Q5VU36 1347 aa27.58■■■□□ 2.01
SYNC-201ENST00000373484 SPATA31A7Q8IWB4 1347 aa27.58■■■□□ 2.01
SYNC-201ENST00000373484 AMPHP49418 695 aa27.57■■■□□ 2
SYNC-201ENST00000373484 LARP1Q6PKG0 1096 aaKnown RBP27.57■■■□□ 2
SYNC-201ENST00000373484 CCDC9Q9Y3X0 531 aaKnown RBP27.57■■■□□ 2
SYNC-201ENST00000373484 FAM208AQ9UK61 1670 aaKnown RBP27.57■■■□□ 2
SYNC-201ENST00000373484 HOXC9P31274 260 aa27.57■■■□□ 2
SYNC-201ENST00000373484 TNNT2P45379 298 aaPredicted RBP27.57■■■□□ 2
SYNC-201ENST00000373484 CC2D1BQ5T0F9 858 aaKnown RBP27.57■■■□□ 2
SYNC-201ENST00000373484 ILDR2Q71H61 639 aa27.56■■■□□ 2
SYNC-201ENST00000373484 ANP32EQ9BTT0 268 aa27.56■■■□□ 2
SYNC-201ENST00000373484 WDR17Q8IZU2 1322 aa27.56■■■□□ 2
SYNC-201ENST00000373484 CRB1P82279 1406 aa27.55■■■□□ 2
SYNC-201ENST00000373484 EMILIN1Q9Y6C2 1016 aa27.55■■■□□ 2
SYNC-201ENST00000373484 ERBB3P21860 1342 aa27.55■■■□□ 2
SYNC-201ENST00000373484 FLT4P35916 1363 aa27.55■■■□□ 2
SYNC-201ENST00000373484 SPATA31A1Q5TZJ5 1347 aa27.54■■■□□ 2
SYNC-201ENST00000373484 POLKQ9UBT6 870 aa27.53■■■□□ 2
SYNC-201ENST00000373484 SMG6Q86US8 1419 aaKnown RBP27.53■■■□□ 2
SYNC-201ENST00000373484 FKBP8Q14318 412 aa27.53■■■□□ 2
SYNC-201ENST00000373484 RGPD2P0DJD1 1756 aa27.53■■■□□ 2
SYNC-201ENST00000373484 WNK3Q9BYP7 1800 aa27.52■■■□□ 2
SYNC-201ENST00000373484 RGS12O14924 1447 aa27.52■■■□□ 2
SYNC-201ENST00000373484 ANKRD24Q8TF21 1146 aa27.51■■□□□ 1.99
SYNC-201ENST00000373484 INSRP06213 1382 aa27.5■■□□□ 1.99
SYNC-201ENST00000373484 CSB-PGBD3P0DP91 1061 aa27.5■■□□□ 1.99
SYNC-201ENST00000373484 TOM1L2Q6ZVM7 507 aa27.5■■□□□ 1.99
SYNC-201ENST00000373484 THSD7AQ9UPZ6 1657 aa27.49■■□□□ 1.99
SYNC-201ENST00000373484 BRWD3Q6RI45 1802 aa27.49■■□□□ 1.99
SYNC-201ENST00000373484 CNGB1Q14028 1251 aaPredicted RBP27.48■■□□□ 1.99
SYNC-201ENST00000373484 HSP90AB2PQ58FF8 381 aa27.48■■□□□ 1.99
SYNC-201ENST00000373484 PPM1GO15355 546 aaPredicted RBP27.48■■□□□ 1.99
SYNC-201ENST00000373484 ONECUT3O60422 494 aaPredicted RBP27.48■■□□□ 1.99
SYNC-201ENST00000373484 USP35Q9P2H5 1018 aa27.48■■□□□ 1.99
SYNC-201ENST00000373484 TCP11L2Q8N4U5 519 aa27.46■■□□□ 1.99
SYNC-201ENST00000373484 THRAP3Q9Y2W1 955 aaKnown RBP27.46■■□□□ 1.99
SYNC-201ENST00000373484 FAM98CQ17RN3 349 aaKnown RBP27.46■■□□□ 1.99
SYNC-201ENST00000373484 LTV1Q96GA3 475 aaPredicted RBP27.46■■□□□ 1.99
SYNC-201ENST00000373484 CARD10Q9BWT7 1032 aa27.46■■□□□ 1.99
SYNC-201ENST00000373484 BARGINQ6ZT62 677 aa27.44■■□□□ 1.98
SYNC-201ENST00000373484 PARP4Q9UKK3 1724 aaKnown RBP27.44■■□□□ 1.98
SYNC-201ENST00000373484 NLRP2Q9NX02 1062 aa27.42■■□□□ 1.98
SYNC-201ENST00000373484 SEPT12Q8IYM1 358 aa27.41■■□□□ 1.98
SYNC-201ENST00000373484 PARD3Q8TEW0 1356 aa27.39■■□□□ 1.98
SYNC-201ENST00000373484 MTHFSP49914 203 aa27.38■■□□□ 1.97
SYNC-201ENST00000373484 DISP2A7MBM2 1401 aa27.38■■□□□ 1.97
SYNC-201ENST00000373484 LRRC37A3O60309 1634 aa27.37■■□□□ 1.97
SYNC-201ENST00000373484 A0A0G2JS52 829 aa27.37■■□□□ 1.97
SYNC-201ENST00000373484 ERICH6BQ5W0A0 696 aa27.37■■□□□ 1.97
SYNC-201ENST00000373484 NBPF6Q5VWK0 638 aa27.36■■□□□ 1.97
SYNC-201ENST00000373484 NBPF4Q96M43 638 aa27.36■■□□□ 1.97
SYNC-201ENST00000373484 EIF4A2Q14240 407 aaKnown RBP27.34■■□□□ 1.97
SYNC-201ENST00000373484 CDCA7Q9BWT1 371 aaPredicted RBP27.34■■□□□ 1.97
SYNC-201ENST00000373484 PPP2R1AP30153 589 aa27.33■■□□□ 1.97
SYNC-201ENST00000373484 NCAPD2Q15021 1401 aa27.33■■□□□ 1.97
SYNC-201ENST00000373484 RGPD1P0DJD0 1748 aa27.33■■□□□ 1.97
SYNC-201ENST00000373484 COL3A1P02461 1466 aaPredicted RBP27.31■■□□□ 1.96
SYNC-201ENST00000373484 IL2RBP14784 551 aa27.3■■□□□ 1.96
SYNC-201ENST00000373484 RALBP1Q15311 655 aa27.3■■□□□ 1.96
SYNC-201ENST00000373484 USHBP1Q8N6Y0 703 aa27.3■■□□□ 1.96
SYNC-201ENST00000373484 KRT27Q7Z3Y8 459 aa27.29■■□□□ 1.96
SYNC-201ENST00000373484 EYA1Q99502 592 aa27.29■■□□□ 1.96
SYNC-201ENST00000373484 EP400Q96L91 3159 aa27.28■■□□□ 1.96
SYNC-201ENST00000373484 IL13P35225 146 aa27.27■■□□□ 1.96
SYNC-201ENST00000373484 MEGF6O75095 1541 aa27.27■■□□□ 1.96
SYNC-201ENST00000373484 DDB1Q16531 1140 aa27.26■■□□□ 1.95
SYNC-201ENST00000373484 IGSF1Q8N6C5 1336 aa27.26■■□□□ 1.95
SYNC-201ENST00000373484 TNS2Q63HR2 1409 aa27.26■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms