RNA–Protein interactions for RNA: ENST00000372195.5

RAPGEF1-203, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-203ENST00000372195 UQCRHP07919 91 aa28.44■■■□□ 2.14
RAPGEF1-203ENST00000372195 FKBP4Q02790 459 aaKnown RBP eCLIP28.44■■■□□ 2.14
RAPGEF1-203ENST00000372195 PDCP20941 246 aa28.43■■■□□ 2.14
RAPGEF1-203ENST00000372195 LARP1BQ659C4 914 aaKnown RBP28.43■■■□□ 2.14
RAPGEF1-203ENST00000372195 DDX54Q8TDD1 881 aaKnown RBP28.43■■■□□ 2.14
RAPGEF1-203ENST00000372195 WDR97A6NE52 1622 aa28.43■■■□□ 2.14
RAPGEF1-203ENST00000372195 KRT18P05783 430 aaKnown RBP28.43■■■□□ 2.14
RAPGEF1-203ENST00000372195 CCDC192P0DO97 292 aa28.43■■■□□ 2.14
RAPGEF1-203ENST00000372195 PKNOX2Q96KN3 472 aa28.42■■■□□ 2.14
RAPGEF1-203ENST00000372195 GPRASP1Q5JY77 1395 aa28.42■■■□□ 2.14
RAPGEF1-203ENST00000372195 NUTM1Q86Y26 1132 aa28.42■■■□□ 2.14
RAPGEF1-203ENST00000372195 PIBF1Q8WXW3 757 aa28.42■■■□□ 2.14
RAPGEF1-203ENST00000372195 ERBINQ96RT1 1412 aa28.42■■■□□ 2.14
RAPGEF1-203ENST00000372195 AXDND1Q5T1B0 1012 aaPredicted RBP28.41■■■□□ 2.14
RAPGEF1-203ENST00000372195 CCT4P50991 539 aaKnown RBP28.41■■■□□ 2.14
RAPGEF1-203ENST00000372195 JAKMIP1Q96N16 626 aaKnown RBP28.41■■■□□ 2.14
RAPGEF1-203ENST00000372195 SMG6Q86US8 1419 aaKnown RBP28.41■■■□□ 2.14
RAPGEF1-203ENST00000372195 ZHX3Q9H4I2 956 aa28.41■■■□□ 2.14
RAPGEF1-203ENST00000372195 MTERF4Q7Z6M4 381 aaKnown RBP28.4■■■□□ 2.14
RAPGEF1-203ENST00000372195 PDRG1Q9NUG6 133 aa28.4■■■□□ 2.14
RAPGEF1-203ENST00000372195 CABP4P57796 275 aa28.4■■■□□ 2.14
RAPGEF1-203ENST00000372195 TMEM132AQ24JP5 1023 aa28.4■■■□□ 2.14
RAPGEF1-203ENST00000372195 SMARCA5O60264 1052 aaPredicted RBP28.4■■■□□ 2.14
RAPGEF1-203ENST00000372195 CCDC85AQ96PX6 553 aaPredicted RBP28.4■■■□□ 2.14
RAPGEF1-203ENST00000372195 CCDC69A6NI79 296 aa28.39■■■□□ 2.14
RAPGEF1-203ENST00000372195 SRCIN1Q9C0H9 1055 aa28.39■■■□□ 2.14
RAPGEF1-203ENST00000372195 CWC15Q9P013 229 aaKnown RBP28.39■■■□□ 2.14
RAPGEF1-203ENST00000372195 STAC3Q96MF2 364 aa28.38■■■□□ 2.13
RAPGEF1-203ENST00000372195 WDR33Q9C0J8 1336 aaKnown RBP28.38■■■□□ 2.13
RAPGEF1-203ENST00000372195 TXLNAP40222 546 aa28.38■■■□□ 2.13
RAPGEF1-203ENST00000372195 CAMK4Q16566 473 aa28.38■■■□□ 2.13
RAPGEF1-203ENST00000372195 TMEM57Q8N5G2 664 aa28.38■■■□□ 2.13
RAPGEF1-203ENST00000372195 SRGAP3O43295 1099 aa28.37■■■□□ 2.13
RAPGEF1-203ENST00000372195 ERCC4Q92889 916 aaPredicted RBP28.37■■■□□ 2.13
RAPGEF1-203ENST00000372195 AEBP1Q8IUX7 1158 aa28.36■■■□□ 2.13
RAPGEF1-203ENST00000372195 THUMPD2Q9BTF0 503 aaKnown RBP28.36■■■□□ 2.13
RAPGEF1-203ENST00000372195 WDR63Q8IWG1 891 aa28.36■■■□□ 2.13
RAPGEF1-203ENST00000372195 ZNF530Q6P9A1 599 aaPredicted RBP28.36■■■□□ 2.13
RAPGEF1-203ENST00000372195 SPATA32Q96LK8 384 aa28.36■■■□□ 2.13
RAPGEF1-203ENST00000372195 TATP17735 454 aaPredicted RBP28.35■■■□□ 2.13
RAPGEF1-203ENST00000372195 CCAR1Q8IX12 1150 aaKnown RBP28.35■■■□□ 2.13
RAPGEF1-203ENST00000372195 KIAA1107Q9UPP5 1409 aa28.35■■■□□ 2.13
RAPGEF1-203ENST00000372195 TANGO6Q9C0B7 1094 aa28.35■■■□□ 2.13
RAPGEF1-203ENST00000372195 SLC3A2P08195 630 aaKnown RBP28.35■■■□□ 2.13
RAPGEF1-203ENST00000372195 CALRP27797 417 aaKnown RBP28.35■■■□□ 2.13
RAPGEF1-203ENST00000372195 C20orf194Q5TEA3 1177 aa28.35■■■□□ 2.13
RAPGEF1-203ENST00000372195 DDX11Q96FC9 970 aa28.35■■■□□ 2.13
RAPGEF1-203ENST00000372195 XPCQ01831 940 aaPredicted RBP28.34■■■□□ 2.13
RAPGEF1-203ENST00000372195 DDX24Q9GZR7 859 aaKnown RBP eCLIP28.34■■■□□ 2.13
RAPGEF1-203ENST00000372195 KRT85P78386 507 aa28.34■■■□□ 2.13
RAPGEF1-203ENST00000372195 FAM193AP78312 1265 aa28.33■■■□□ 2.13
RAPGEF1-203ENST00000372195 C9orf84Q5VXU9 1444 aa28.33■■■□□ 2.13
RAPGEF1-203ENST00000372195 PPFIBP1Q86W92 1011 aa28.33■■■□□ 2.13
RAPGEF1-203ENST00000372195 SYCE3A1L190 88 aa28.33■■■□□ 2.13
RAPGEF1-203ENST00000372195 CCDC66A2RUB6 948 aa28.32■■■□□ 2.12
RAPGEF1-203ENST00000372195 LEKR1Q6ZMV7 388 aa28.32■■■□□ 2.12
RAPGEF1-203ENST00000372195 MCM4P33991 863 aa28.32■■■□□ 2.12
RAPGEF1-203ENST00000372195 PLCD4Q9BRC7 762 aa28.32■■■□□ 2.12
RAPGEF1-203ENST00000372195 TSPYL1Q9H0U9 437 aa28.32■■■□□ 2.12
RAPGEF1-203ENST00000372195 CCP110O43303 1012 aa28.32■■■□□ 2.12
RAPGEF1-203ENST00000372195 BTBD11A6QL63 1104 aa28.32■■■□□ 2.12
RAPGEF1-203ENST00000372195 CASTP20810 708 aaKnown RBP28.31■■■□□ 2.12
RAPGEF1-203ENST00000372195 EXOC6BQ9Y2D4 811 aa28.31■■■□□ 2.12
RAPGEF1-203ENST00000372195 ANKRD1Q15327 319 aa28.31■■■□□ 2.12
RAPGEF1-203ENST00000372195 MAPK8IP2Q13387 824 aaPredicted RBP28.31■■■□□ 2.12
RAPGEF1-203ENST00000372195 DCTN1Q14203 1278 aa28.3■■■□□ 2.12
RAPGEF1-203ENST00000372195 DEF6Q9H4E7 631 aa28.3■■■□□ 2.12
RAPGEF1-203ENST00000372195 BLOC1S2Q6QNY1 142 aa28.3■■■□□ 2.12
RAPGEF1-203ENST00000372195 CCDC112Q8NEF3 446 aa28.3■■■□□ 2.12
RAPGEF1-203ENST00000372195 PROSER2Q86WR7 435 aaPredicted RBP28.3■■■□□ 2.12
RAPGEF1-203ENST00000372195 C11orf95C9JLR9 678 aaPredicted RBP28.3■■■□□ 2.12
RAPGEF1-203ENST00000372195 SCAPERQ9BY12 1400 aa28.3■■■□□ 2.12
RAPGEF1-203ENST00000372195 RDXP35241 583 aaKnown RBP28.29■■■□□ 2.12
RAPGEF1-203ENST00000372195 TOM1L2Q6ZVM7 507 aa28.29■■■□□ 2.12
RAPGEF1-203ENST00000372195 FILIP1Q7Z7B0 1213 aa28.29■■■□□ 2.12
RAPGEF1-203ENST00000372195 SYCP1Q15431 976 aa28.28■■■□□ 2.12
RAPGEF1-203ENST00000372195 PRG4Q92954 1404 aaPredicted RBP28.28■■■□□ 2.12
RAPGEF1-203ENST00000372195 ERICH4A6NGS2 130 aa28.28■■■□□ 2.12
RAPGEF1-203ENST00000372195 HMGN5P82970 282 aaKnown RBP28.28■■■□□ 2.12
RAPGEF1-203ENST00000372195 CCDC57Q2TAC2 916 aa28.28■■■□□ 2.12
RAPGEF1-203ENST00000372195 ZNHIT6Q9NWK9 470 aaKnown RBP28.28■■■□□ 2.12
RAPGEF1-203ENST00000372195 TRIM22Q8IYM9 498 aa28.27■■■□□ 2.12
RAPGEF1-203ENST00000372195 CENPHQ9H3R5 247 aa28.27■■■□□ 2.12
RAPGEF1-203ENST00000372195 MCM10Q7L590 875 aa28.27■■■□□ 2.12
RAPGEF1-203ENST00000372195 SLFN5Q08AF3 891 aa28.27■■■□□ 2.12
RAPGEF1-203ENST00000372195 CT47B1P0C2W7 299 aaPredicted RBP28.27■■■□□ 2.12
RAPGEF1-203ENST00000372195 NUP62CLQ9H1M0 184 aa28.26■■■□□ 2.12
RAPGEF1-203ENST00000372195 JMYQ8N9B5 988 aa28.26■■■□□ 2.11
RAPGEF1-203ENST00000372195 FERMT3Q86UX7 667 aa28.26■■■□□ 2.11
RAPGEF1-203ENST00000372195 RTEL1-TNFRSF6BF6WH68 1400 aa28.25■■■□□ 2.11
RAPGEF1-203ENST00000372195 CCDC181Q5TID7 509 aa28.25■■■□□ 2.11
RAPGEF1-203ENST00000372195 GNL3LQ9NVN8 582 aaKnown RBP28.25■■■□□ 2.11
RAPGEF1-203ENST00000372195 CCDC83Q8IWF9 413 aa28.25■■■□□ 2.11
RAPGEF1-203ENST00000372195 NUTM2BA6NNL0 878 aaPredicted RBP28.25■■■□□ 2.11
RAPGEF1-203ENST00000372195 NUTM2EB1AL46 878 aaPredicted RBP28.25■■■□□ 2.11
RAPGEF1-203ENST00000372195 NUTM2AQ8IVF1 878 aaPredicted RBP28.25■■■□□ 2.11
RAPGEF1-203ENST00000372195 LARP6Q9BRS8 491 aaKnown RBP28.25■■■□□ 2.11
RAPGEF1-203ENST00000372195 SYNJ1O43426 1573 aa28.25■■■□□ 2.11
RAPGEF1-203ENST00000372195 NSD3Q9BZ95 1437 aa28.24■■■□□ 2.11
RAPGEF1-203ENST00000372195 MYO6Q9UM54 1294 aa28.24■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms