RNA–Protein interactions for RNA: ENST00000369510.8

VANGL1-204, Transcript of VANGL planar cell polarity protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VANGL1, Length 8,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-204ENST00000369510 TTC14Q96N46 770 aa10.2□□□□□ -0.78
VANGL1-204ENST00000369510 KINO60870 393 aaKnown RBP10.19□□□□□ -0.78
VANGL1-204ENST00000369510 LUC7L2Q9Y383 392 aaKnown RBP10.19□□□□□ -0.78
VANGL1-204ENST00000369510 POTEB3A0JP26 581 aa10.19□□□□□ -0.78
VANGL1-204ENST00000369510 CASQ2O14958 399 aaPredicted RBP10.19□□□□□ -0.78
VANGL1-204ENST00000369510 POTEBQ6S5H4 581 aa10.19□□□□□ -0.78
VANGL1-204ENST00000369510 USO1O60763 962 aaKnown RBP10.19□□□□□ -0.78
VANGL1-204ENST00000369510 SARNPP82979 210 aaKnown RBP10.19□□□□□ -0.78
VANGL1-204ENST00000369510 ARMC9Q7Z3E5 817 aa10.19□□□□□ -0.78
VANGL1-204ENST00000369510 CCDC102AQ96A19 550 aa10.19□□□□□ -0.78
VANGL1-204ENST00000369510 FSD2A1L4K1 749 aa10.19□□□□□ -0.78
VANGL1-204ENST00000369510 CEP57L1Q8IYX8 460 aa10.19□□□□□ -0.78
VANGL1-204ENST00000369510 CCDC83Q8IWF9 413 aa10.19□□□□□ -0.78
VANGL1-204ENST00000369510 GBP7Q8N8V2 638 aaPredicted RBP10.19□□□□□ -0.78
VANGL1-204ENST00000369510 FBF1Q8TES7 1133 aa10.19□□□□□ -0.78
VANGL1-204ENST00000369510 FMNL2Q96PY5 1086 aa10.19□□□□□ -0.78
VANGL1-204ENST00000369510 PDILTQ8N807 584 aa10.18□□□□□ -0.78
VANGL1-204ENST00000369510 ZNF397Q8NF99 534 aaPredicted RBP10.18□□□□□ -0.78
VANGL1-204ENST00000369510 EFCAB2Q5VUJ9 269 aa10.18□□□□□ -0.78
VANGL1-204ENST00000369510 NAA15Q9BXJ9 866 aaKnown RBP10.18□□□□□ -0.78
VANGL1-204ENST00000369510 RNF8O76064 485 aa10.18□□□□□ -0.78
VANGL1-204ENST00000369510 SART3Q15020 963 aaKnown RBP10.18□□□□□ -0.78
VANGL1-204ENST00000369510 PDCD2Q16342 344 aaPredicted RBP10.18□□□□□ -0.78
VANGL1-204ENST00000369510 GTF2E1P29083 439 aaPredicted RBP10.18□□□□□ -0.78
VANGL1-204ENST00000369510 KIAA1524Q8TCG1 905 aa10.18□□□□□ -0.78
VANGL1-204ENST00000369510 RCAN3Q9UKA8 241 aa10.18□□□□□ -0.78
VANGL1-204ENST00000369510 CFAP100Q494V2 611 aa10.17□□□□□ -0.78
VANGL1-204ENST00000369510 STIM2Q9P246 746 aa10.17□□□□□ -0.78
VANGL1-204ENST00000369510 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.17□□□□□ -0.78
VANGL1-204ENST00000369510 VCX3BQ9H321 246 aa10.17□□□□□ -0.78
VANGL1-204ENST00000369510 SSBP05455 408 aaKnown RBP eCLIP10.17□□□□□ -0.78
VANGL1-204ENST00000369510 COMMD10Q9Y6G5 202 aa10.17□□□□□ -0.78
VANGL1-204ENST00000369510 MVPQ14764 893 aaKnown RBP10.17□□□□□ -0.78
VANGL1-204ENST00000369510 MAP7D1Q3KQU3 841 aa10.17□□□□□ -0.78
VANGL1-204ENST00000369510 SLC3A2P08195 630 aaKnown RBP10.17□□□□□ -0.78
VANGL1-204ENST00000369510 RSPH3Q86UC2 560 aa10.17□□□□□ -0.78
VANGL1-204ENST00000369510 RBM25P49756 843 aaKnown RBP10.17□□□□□ -0.78
VANGL1-204ENST00000369510 AAMPQ13685 434 aa10.17□□□□□ -0.78
VANGL1-204ENST00000369510 CACNA2D3Q8IZS8 1091 aa10.17□□□□□ -0.78
VANGL1-204ENST00000369510 STK26Q9P289 416 aa10.17□□□□□ -0.78
VANGL1-204ENST00000369510 KIF5BP33176 963 aa10.17□□□□□ -0.78
VANGL1-204ENST00000369510 SETD5Q9C0A6 1442 aa10.17□□□□□ -0.78
VANGL1-204ENST00000369510 SAFB2Q14151 953 aaKnown RBP eCLIP10.16□□□□□ -0.78
VANGL1-204ENST00000369510 RSRC1Q96IZ7 334 aaKnown RBP10.16□□□□□ -0.78
VANGL1-204ENST00000369510 TUBB4BP68371 445 aa10.16□□□□□ -0.78
VANGL1-204ENST00000369510 HMGB2P26583 209 aaKnown RBP10.16□□□□□ -0.78
VANGL1-204ENST00000369510 TDO2P48775 406 aa10.16□□□□□ -0.78
VANGL1-204ENST00000369510 STMN2Q93045 179 aa10.16□□□□□ -0.78
VANGL1-204ENST00000369510 SEC62Q99442 399 aaKnown RBP10.16□□□□□ -0.78
VANGL1-204ENST00000369510 CEP131Q9UPN4 1083 aa10.16□□□□□ -0.78
VANGL1-204ENST00000369510 RAB3GAP2Q9H2M9 1393 aa10.16□□□□□ -0.78
VANGL1-204ENST00000369510 A0A1B0GUA9 196 aa10.16□□□□□ -0.78
VANGL1-204ENST00000369510 CCDC50Q8IVM0 306 aa10.16□□□□□ -0.78
VANGL1-204ENST00000369510 MACROD2A1Z1Q3 448 aa10.16□□□□□ -0.78
VANGL1-204ENST00000369510 CCDC160A6NGH7 325 aa10.16□□□□□ -0.78
VANGL1-204ENST00000369510 PPM1FP49593 454 aaPredicted RBP10.16□□□□□ -0.78
VANGL1-204ENST00000369510 RPGRIP1Q96KN7 1286 aa10.16□□□□□ -0.78
VANGL1-204ENST00000369510 FMN1Q68DA7 1419 aa10.16□□□□□ -0.78
VANGL1-204ENST00000369510 TPD52P55327 224 aaPredicted RBP10.15□□□□□ -0.78
VANGL1-204ENST00000369510 FILIP1Q7Z7B0 1213 aa10.15□□□□□ -0.78
VANGL1-204ENST00000369510 RFC1P35251 1148 aaPredicted RBP10.15□□□□□ -0.78
VANGL1-204ENST00000369510 GTF2A1P52655 376 aaPredicted RBP10.15□□□□□ -0.78
VANGL1-204ENST00000369510 PRR16Q569H4 304 aa10.15□□□□□ -0.78
VANGL1-204ENST00000369510 BICD1Q96G01 975 aa10.15□□□□□ -0.78
VANGL1-204ENST00000369510 ZNF396Q96N95 335 aaPredicted RBP10.15□□□□□ -0.78
VANGL1-204ENST00000369510 PPP1R1BQ9UD71 204 aaPredicted RBP10.15□□□□□ -0.78
VANGL1-204ENST00000369510 KTN1Q86UP2 1357 aaKnown RBP10.15□□□□□ -0.78
VANGL1-204ENST00000369510 GBP6Q6ZN66 633 aa10.15□□□□□ -0.78
VANGL1-204ENST00000369510 IFFO1Q0D2I5 559 aa10.15□□□□□ -0.78
VANGL1-204ENST00000369510 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.15□□□□□ -0.78
VANGL1-204ENST00000369510 CWC25Q9NXE8 425 aaPredicted RBP10.15□□□□□ -0.78
VANGL1-204ENST00000369510 RAI14Q9P0K7 980 aa10.15□□□□□ -0.78
VANGL1-204ENST00000369510 IKBKGQ9Y6K9 419 aa10.15□□□□□ -0.78
VANGL1-204ENST00000369510 MCM2P49736 904 aa10.15□□□□□ -0.78
VANGL1-204ENST00000369510 VCXQ9H320 206 aa10.15□□□□□ -0.78
VANGL1-204ENST00000369510 APBB1O00213 710 aa10.15□□□□□ -0.79
VANGL1-204ENST00000369510 PLIN1O60240 522 aa10.15□□□□□ -0.79
VANGL1-204ENST00000369510 CCDC89Q8N998 374 aa10.15□□□□□ -0.79
VANGL1-204ENST00000369510 SDF4Q9BRK5 362 aa10.15□□□□□ -0.79
VANGL1-204ENST00000369510 MNAT1P51948 309 aa10.15□□□□□ -0.79
VANGL1-204ENST00000369510 PDCD7Q8N8D1 485 aaKnown RBP10.15□□□□□ -0.79
VANGL1-204ENST00000369510 PSMA5P28066 241 aa10.14□□□□□ -0.79
VANGL1-204ENST00000369510 SETDB1Q15047 1291 aa10.14□□□□□ -0.79
VANGL1-204ENST00000369510 GPATCH11Q8N954 259 aa10.14□□□□□ -0.79
VANGL1-204ENST00000369510 VCX3AQ9NNX9 186 aa10.14□□□□□ -0.79
VANGL1-204ENST00000369510 CCDC150Q8NCX0 1101 aa10.14□□□□□ -0.79
VANGL1-204ENST00000369510 ERCC6LQ2NKX8 1250 aa10.14□□□□□ -0.79
VANGL1-204ENST00000369510 ZNF330Q9Y3S2 320 aaPredicted RBP10.14□□□□□ -0.79
VANGL1-204ENST00000369510 PLVAPQ9BX97 442 aa10.14□□□□□ -0.79
VANGL1-204ENST00000369510 SPC25Q9HBM1 224 aa10.14□□□□□ -0.79
VANGL1-204ENST00000369510 ANKRD30AQ9BXX3 1397 aa10.14□□□□□ -0.79
VANGL1-204ENST00000369510 CTAGE6Q86UF2 777 aa10.14□□□□□ -0.79
VANGL1-204ENST00000369510 EXOC6Q8TAG9 804 aa10.14□□□□□ -0.79
VANGL1-204ENST00000369510 GSTTP1A0A1W2PQM5 241 aa10.13□□□□□ -0.79
VANGL1-204ENST00000369510 NFXL1Q6ZNB6 911 aa10.13□□□□□ -0.79
VANGL1-204ENST00000369510 ZHX1Q9UKY1 873 aaPredicted RBP10.13□□□□□ -0.79
VANGL1-204ENST00000369510 ARID4AP29374 1257 aaPredicted RBP10.13□□□□□ -0.79
VANGL1-204ENST00000369510 CAMK4Q16566 473 aa10.13□□□□□ -0.79
VANGL1-204ENST00000369510 TERF2IPQ9NYB0 399 aa10.13□□□□□ -0.79
VANGL1-204ENST00000369510 SATB2Q9UPW6 733 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 127.6 ms