RNA–Protein interactions for RNA: ENST00000350697.7

SEC13-202, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SEC13, Length 1,425 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-202ENST00000350697 SOCS7O14512 581 aa19.02■□□□□ 0.64
SEC13-202ENST00000350697 DDX10Q13206 875 aaKnown RBP19.02■□□□□ 0.64
SEC13-202ENST00000350697 MORC1Q86VD1 984 aa19.02■□□□□ 0.64
SEC13-202ENST00000350697 MAP3K19Q56UN5 1328 aa19.02■□□□□ 0.64
SEC13-202ENST00000350697 RRS1Q15050 365 aaKnown RBP19.01■□□□□ 0.63
SEC13-202ENST00000350697 VPS72Q15906 364 aa19.01■□□□□ 0.63
SEC13-202ENST00000350697 AXIN2Q9Y2T1 843 aa19.01■□□□□ 0.63
SEC13-202ENST00000350697 EVA1CP58658 441 aa19■□□□□ 0.63
SEC13-202ENST00000350697 CC2D1BQ5T0F9 858 aaKnown RBP19■□□□□ 0.63
SEC13-202ENST00000350697 STRN4Q9NRL3 753 aa19■□□□□ 0.63
SEC13-202ENST00000350697 COL5A2P05997 1499 aaPredicted RBP19■□□□□ 0.63
SEC13-202ENST00000350697 TNNT2P45379 298 aaPredicted RBP19■□□□□ 0.63
SEC13-202ENST00000350697 AMPHP49418 695 aa19■□□□□ 0.63
SEC13-202ENST00000350697 IP6K1Q92551 441 aa19■□□□□ 0.63
SEC13-202ENST00000350697 RGPD5Q99666 1765 aa18.99■□□□□ 0.63
SEC13-202ENST00000350697 RTL1A6NKG5 1358 aa18.99■□□□□ 0.63
SEC13-202ENST00000350697 KIF24Q5T7B8 1368 aa18.99■□□□□ 0.63
SEC13-202ENST00000350697 RBM6P78332 1123 aaKnown RBP18.99■□□□□ 0.63
SEC13-202ENST00000350697 MAP2P11137 1827 aaKnown RBP18.98■□□□□ 0.63
SEC13-202ENST00000350697 BLMP54132 1417 aaPredicted RBP18.98■□□□□ 0.63
SEC13-202ENST00000350697 RXRBP28702 533 aa18.98■□□□□ 0.63
SEC13-202ENST00000350697 GJD4Q96KN9 370 aaPredicted RBP18.98■□□□□ 0.63
SEC13-202ENST00000350697 CCDC9Q9Y3X0 531 aaKnown RBP18.98■□□□□ 0.63
SEC13-202ENST00000350697 HOXC9P31274 260 aa18.97■□□□□ 0.63
SEC13-202ENST00000350697 EMILIN1Q9Y6C2 1016 aa18.97■□□□□ 0.63
SEC13-202ENST00000350697 LARP1Q6PKG0 1096 aaKnown RBP18.96■□□□□ 0.63
SEC13-202ENST00000350697 POLKQ9UBT6 870 aa18.96■□□□□ 0.63
SEC13-202ENST00000350697 SPATA31A5Q5VU36 1347 aa18.96■□□□□ 0.63
SEC13-202ENST00000350697 SPATA31A7Q8IWB4 1347 aa18.96■□□□□ 0.63
SEC13-202ENST00000350697 FLT4P35916 1363 aa18.96■□□□□ 0.63
SEC13-202ENST00000350697 CNGB1Q14028 1251 aaPredicted RBP18.95■□□□□ 0.62
SEC13-202ENST00000350697 ERBB3P21860 1342 aa18.95■□□□□ 0.62
SEC13-202ENST00000350697 WDR17Q8IZU2 1322 aa18.95■□□□□ 0.62
SEC13-202ENST00000350697 PEAK1Q9H792 1746 aa18.95■□□□□ 0.62
SEC13-202ENST00000350697 PPM1GO15355 546 aaPredicted RBP18.94■□□□□ 0.62
SEC13-202ENST00000350697 CSB-PGBD3P0DP91 1061 aa18.94■□□□□ 0.62
SEC13-202ENST00000350697 GLI3P10071 1580 aa18.94■□□□□ 0.62
SEC13-202ENST00000350697 CRB1P82279 1406 aa18.93■□□□□ 0.62
SEC13-202ENST00000350697 SPATA31A1Q5TZJ5 1347 aa18.93■□□□□ 0.62
SEC13-202ENST00000350697 ANKRD24Q8TF21 1146 aa18.93■□□□□ 0.62
SEC13-202ENST00000350697 SMG6Q86US8 1419 aaKnown RBP18.93■□□□□ 0.62
SEC13-202ENST00000350697 INSRP06213 1382 aa18.92■□□□□ 0.62
SEC13-202ENST00000350697 TOM1L2Q6ZVM7 507 aa18.92■□□□□ 0.62
SEC13-202ENST00000350697 CDK12Q9NYV4 1490 aaPredicted RBP18.92■□□□□ 0.62
SEC13-202ENST00000350697 HSP90AB2PQ58FF8 381 aa18.91■□□□□ 0.62
SEC13-202ENST00000350697 LTV1Q96GA3 475 aaPredicted RBP18.91■□□□□ 0.62
SEC13-202ENST00000350697 USP35Q9P2H5 1018 aa18.91■□□□□ 0.62
SEC13-202ENST00000350697 TCP11L2Q8N4U5 519 aa18.9■□□□□ 0.62
SEC13-202ENST00000350697 CARD10Q9BWT7 1032 aa18.9■□□□□ 0.62
SEC13-202ENST00000350697 FAM208AQ9UK61 1670 aaKnown RBP18.89■□□□□ 0.61
SEC13-202ENST00000350697 NLRP2Q9NX02 1062 aa18.89■□□□□ 0.61
SEC13-202ENST00000350697 THRAP3Q9Y2W1 955 aaKnown RBP18.89■□□□□ 0.61
SEC13-202ENST00000350697 ONECUT3O60422 494 aaPredicted RBP18.88■□□□□ 0.61
SEC13-202ENST00000350697 FAM98CQ17RN3 349 aaKnown RBP18.88■□□□□ 0.61
SEC13-202ENST00000350697 MTHFSP49914 203 aa18.87■□□□□ 0.61
SEC13-202ENST00000350697 BARGINQ6ZT62 677 aa18.87■□□□□ 0.61
SEC13-202ENST00000350697 RGS12O14924 1447 aa18.87■□□□□ 0.61
SEC13-202ENST00000350697 PARD3Q8TEW0 1356 aa18.87■□□□□ 0.61
SEC13-202ENST00000350697 RALBP1Q15311 655 aa18.84■□□□□ 0.61
SEC13-202ENST00000350697 SEPT12Q8IYM1 358 aa18.84■□□□□ 0.61
SEC13-202ENST00000350697 A0A0G2JS52 829 aa18.83■□□□□ 0.61
SEC13-202ENST00000350697 PPP2R1AP30153 589 aa18.83■□□□□ 0.61
SEC13-202ENST00000350697 MYT1Q01538 1121 aa18.83■□□□□ 0.61
SEC13-202ENST00000350697 THSD7AQ9UPZ6 1657 aa18.83■□□□□ 0.61
SEC13-202ENST00000350697 RGPD2P0DJD1 1756 aa18.83■□□□□ 0.61
SEC13-202ENST00000350697 EIF4A2Q14240 407 aaKnown RBP18.83■□□□□ 0.6
SEC13-202ENST00000350697 NBPF6Q5VWK0 638 aa18.83■□□□□ 0.6
SEC13-202ENST00000350697 NBPF4Q96M43 638 aa18.83■□□□□ 0.6
SEC13-202ENST00000350697 CDCA7Q9BWT1 371 aaPredicted RBP18.83■□□□□ 0.6
SEC13-202ENST00000350697 WNK3Q9BYP7 1800 aa18.81■□□□□ 0.6
SEC13-202ENST00000350697 DISP2A7MBM2 1401 aa18.8■□□□□ 0.6
SEC13-202ENST00000350697 EYA1Q99502 592 aa18.79■□□□□ 0.6
SEC13-202ENST00000350697 BRWD3Q6RI45 1802 aa18.78■□□□□ 0.6
SEC13-202ENST00000350697 PARP4Q9UKK3 1724 aaKnown RBP18.78■□□□□ 0.6
SEC13-202ENST00000350697 IL2RBP14784 551 aa18.78■□□□□ 0.6
SEC13-202ENST00000350697 USHBP1Q8N6Y0 703 aa18.78■□□□□ 0.6
SEC13-202ENST00000350697 CFAP53Q96M91 514 aa18.78■□□□□ 0.6
SEC13-202ENST00000350697 PRKRIP1Q9H875 184 aaPredicted RBP18.78■□□□□ 0.6
SEC13-202ENST00000350697 NCAPD2Q15021 1401 aa18.77■□□□□ 0.6
SEC13-202ENST00000350697 DIAPH1O60610 1272 aaKnown RBP18.77■□□□□ 0.6
SEC13-202ENST00000350697 IL13P35225 146 aa18.77■□□□□ 0.6
SEC13-202ENST00000350697 COL3A1P02461 1466 aaPredicted RBP18.76■□□□□ 0.59
SEC13-202ENST00000350697 KRT27Q7Z3Y8 459 aa18.76■□□□□ 0.59
SEC13-202ENST00000350697 IGSF1Q8N6C5 1336 aa18.76■□□□□ 0.59
SEC13-202ENST00000350697 MYBBP1AQ9BQG0 1328 aaKnown RBP18.76■□□□□ 0.59
SEC13-202ENST00000350697 DDB1Q16531 1140 aa18.75■□□□□ 0.59
SEC13-202ENST00000350697 PDE3BQ13370 1112 aa18.74■□□□□ 0.59
SEC13-202ENST00000350697 RAPGEF4Q8WZA2 1011 aa18.74■□□□□ 0.59
SEC13-202ENST00000350697 LRRC37A3O60309 1634 aa18.74■□□□□ 0.59
SEC13-202ENST00000350697 EXOC5O00471 708 aa18.74■□□□□ 0.59
SEC13-202ENST00000350697 RGPD1P0DJD0 1748 aa18.74■□□□□ 0.59
SEC13-202ENST00000350697 TNS2Q63HR2 1409 aa18.73■□□□□ 0.59
SEC13-202ENST00000350697 MEGF6O75095 1541 aa18.72■□□□□ 0.59
SEC13-202ENST00000350697 TATP17735 454 aaPredicted RBP18.72■□□□□ 0.59
SEC13-202ENST00000350697 OVOS2A0A0G2JMS6 1433 aa18.72■□□□□ 0.59
SEC13-202ENST00000350697 ANP32CO43423 234 aa18.71■□□□□ 0.59
SEC13-202ENST00000350697 NUDCQ9Y266 331 aa18.7■□□□□ 0.58
SEC13-202ENST00000350697 KDRP35968 1356 aa18.69■□□□□ 0.58
SEC13-202ENST00000350697 U2SURPO15042 1029 aaKnown RBP18.69■□□□□ 0.58
SEC13-202ENST00000350697 SULT6B1Q6IMI4 303 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms