RNA–Protein interactions for RNA: ENST00000342690.4

RBM38-201, Transcript of RNA binding motif protein 38, humanhuman

TSL 3

Gene RBM38, Length 852 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM38-201ENST00000342690 MAP3K19Q56UN5 1328 aa29.97■■■□□ 2.39
RBM38-201ENST00000342690 COL5A2P05997 1499 aaPredicted RBP29.97■■■□□ 2.39
RBM38-201ENST00000342690 AXIN2Q9Y2T1 843 aa29.96■■■□□ 2.39
RBM38-201ENST00000342690 RRS1Q15050 365 aaKnown RBP29.95■■■□□ 2.39
RBM38-201ENST00000342690 NPC1L1Q9UHC9 1359 aa29.94■■■□□ 2.38
RBM38-201ENST00000342690 VPS72Q15906 364 aa29.94■■■□□ 2.38
RBM38-201ENST00000342690 STRN4Q9NRL3 753 aa29.94■■■□□ 2.38
RBM38-201ENST00000342690 PEAK1Q9H792 1746 aa29.93■■■□□ 2.38
RBM38-201ENST00000342690 MORC1Q86VD1 984 aa29.93■■■□□ 2.38
RBM38-201ENST00000342690 GLI3P10071 1580 aa29.93■■■□□ 2.38
RBM38-201ENST00000342690 CC2D1BQ5T0F9 858 aaKnown RBP29.92■■■□□ 2.38
RBM38-201ENST00000342690 TNNT2P45379 298 aaPredicted RBP29.91■■■□□ 2.38
RBM38-201ENST00000342690 MAP2P11137 1827 aaKnown RBP29.91■■■□□ 2.38
RBM38-201ENST00000342690 RTL1A6NKG5 1358 aa29.9■■■□□ 2.38
RBM38-201ENST00000342690 EVA1CP58658 441 aa29.9■■■□□ 2.38
RBM38-201ENST00000342690 IP6K1Q92551 441 aa29.9■■■□□ 2.38
RBM38-201ENST00000342690 BLMP54132 1417 aaPredicted RBP29.89■■■□□ 2.38
RBM38-201ENST00000342690 HOXC9P31274 260 aa29.89■■■□□ 2.38
RBM38-201ENST00000342690 AMPHP49418 695 aa29.89■■■□□ 2.38
RBM38-201ENST00000342690 RBM6P78332 1123 aaKnown RBP29.89■■■□□ 2.38
RBM38-201ENST00000342690 GJD4Q96KN9 370 aaPredicted RBP29.89■■■□□ 2.38
RBM38-201ENST00000342690 RXRBP28702 533 aa29.88■■■□□ 2.37
RBM38-201ENST00000342690 CNGB1Q14028 1251 aaPredicted RBP29.88■■■□□ 2.37
RBM38-201ENST00000342690 LARP1Q6PKG0 1096 aaKnown RBP29.88■■■□□ 2.37
RBM38-201ENST00000342690 CCDC9Q9Y3X0 531 aaKnown RBP29.88■■■□□ 2.37
RBM38-201ENST00000342690 EMILIN1Q9Y6C2 1016 aa29.88■■■□□ 2.37
RBM38-201ENST00000342690 SPATA31A5Q5VU36 1347 aa29.86■■■□□ 2.37
RBM38-201ENST00000342690 SPATA31A7Q8IWB4 1347 aa29.86■■■□□ 2.37
RBM38-201ENST00000342690 POLKQ9UBT6 870 aa29.85■■■□□ 2.37
RBM38-201ENST00000342690 FLT4P35916 1363 aa29.85■■■□□ 2.37
RBM38-201ENST00000342690 KIF24Q5T7B8 1368 aa29.85■■■□□ 2.37
RBM38-201ENST00000342690 ERBB3P21860 1342 aa29.84■■■□□ 2.37
RBM38-201ENST00000342690 WDR17Q8IZU2 1322 aa29.84■■■□□ 2.37
RBM38-201ENST00000342690 CRB1P82279 1406 aa29.84■■■□□ 2.37
RBM38-201ENST00000342690 SMG6Q86US8 1419 aaKnown RBP29.83■■■□□ 2.37
RBM38-201ENST00000342690 SPATA31A1Q5TZJ5 1347 aa29.83■■■□□ 2.37
RBM38-201ENST00000342690 ANKRD24Q8TF21 1146 aa29.83■■■□□ 2.37
RBM38-201ENST00000342690 ILDR2Q71H61 639 aa29.82■■■□□ 2.36
RBM38-201ENST00000342690 CDK12Q9NYV4 1490 aaPredicted RBP29.81■■■□□ 2.36
RBM38-201ENST00000342690 CSB-PGBD3P0DP91 1061 aa29.81■■■□□ 2.36
RBM38-201ENST00000342690 RGS12O14924 1447 aa29.8■■■□□ 2.36
RBM38-201ENST00000342690 PPM1GO15355 546 aaPredicted RBP29.8■■■□□ 2.36
RBM38-201ENST00000342690 INSRP06213 1382 aa29.79■■■□□ 2.36
RBM38-201ENST00000342690 FAM208AQ9UK61 1670 aaKnown RBP29.79■■■□□ 2.36
RBM38-201ENST00000342690 HSP90AB2PQ58FF8 381 aa29.79■■■□□ 2.36
RBM38-201ENST00000342690 TOM1L2Q6ZVM7 507 aa29.79■■■□□ 2.36
RBM38-201ENST00000342690 LTV1Q96GA3 475 aaPredicted RBP29.79■■■□□ 2.36
RBM38-201ENST00000342690 USP35Q9P2H5 1018 aa29.78■■■□□ 2.36
RBM38-201ENST00000342690 RGPD2P0DJD1 1756 aa29.75■■■□□ 2.35
RBM38-201ENST00000342690 THSD7AQ9UPZ6 1657 aa29.75■■■□□ 2.35
RBM38-201ENST00000342690 WNK3Q9BYP7 1800 aa29.74■■■□□ 2.35
RBM38-201ENST00000342690 FAM98CQ17RN3 349 aaKnown RBP29.74■■■□□ 2.35
RBM38-201ENST00000342690 TCP11L2Q8N4U5 519 aa29.74■■■□□ 2.35
RBM38-201ENST00000342690 CARD10Q9BWT7 1032 aa29.74■■■□□ 2.35
RBM38-201ENST00000342690 ONECUT3O60422 494 aaPredicted RBP29.72■■■□□ 2.35
RBM38-201ENST00000342690 NLRP2Q9NX02 1062 aa29.72■■■□□ 2.35
RBM38-201ENST00000342690 THRAP3Q9Y2W1 955 aaKnown RBP29.72■■■□□ 2.35
RBM38-201ENST00000342690 BARGINQ6ZT62 677 aa29.71■■■□□ 2.35
RBM38-201ENST00000342690 PARD3Q8TEW0 1356 aa29.71■■■□□ 2.35
RBM38-201ENST00000342690 MTHFSP49914 203 aa29.69■■■□□ 2.34
RBM38-201ENST00000342690 RALBP1Q15311 655 aa29.68■■■□□ 2.34
RBM38-201ENST00000342690 SEPT12Q8IYM1 358 aa29.68■■■□□ 2.34
RBM38-201ENST00000342690 BRWD3Q6RI45 1802 aa29.67■■■□□ 2.34
RBM38-201ENST00000342690 DISP2A7MBM2 1401 aa29.66■■■□□ 2.34
RBM38-201ENST00000342690 A0A0G2JS52 829 aa29.66■■■□□ 2.34
RBM38-201ENST00000342690 MYT1Q01538 1121 aa29.66■■■□□ 2.34
RBM38-201ENST00000342690 EIF4A2Q14240 407 aaKnown RBP29.66■■■□□ 2.34
RBM38-201ENST00000342690 PARP4Q9UKK3 1724 aaKnown RBP29.65■■■□□ 2.34
RBM38-201ENST00000342690 PPP2R1AP30153 589 aa29.65■■■□□ 2.34
RBM38-201ENST00000342690 NBPF6Q5VWK0 638 aa29.65■■■□□ 2.34
RBM38-201ENST00000342690 NBPF4Q96M43 638 aa29.65■■■□□ 2.34
RBM38-201ENST00000342690 ANP32CO43423 234 aa29.64■■■□□ 2.34
RBM38-201ENST00000342690 LRRC37A3O60309 1634 aa29.63■■■□□ 2.33
RBM38-201ENST00000342690 USHBP1Q8N6Y0 703 aa29.62■■■□□ 2.33
RBM38-201ENST00000342690 PRKRIP1Q9H875 184 aaPredicted RBP29.62■■■□□ 2.33
RBM38-201ENST00000342690 COL3A1P02461 1466 aaPredicted RBP29.61■■■□□ 2.33
RBM38-201ENST00000342690 NCAPD2Q15021 1401 aa29.6■■■□□ 2.33
RBM38-201ENST00000342690 EYA1Q99502 592 aa29.59■■■□□ 2.33
RBM38-201ENST00000342690 DIEXFQ68CQ4 756 aaKnown RBP29.58■■■□□ 2.33
RBM38-201ENST00000342690 CDCA7Q9BWT1 371 aaPredicted RBP29.58■■■□□ 2.33
RBM38-201ENST00000342690 RGPD1P0DJD0 1748 aa29.57■■■□□ 2.32
RBM38-201ENST00000342690 MYBBP1AQ9BQG0 1328 aaKnown RBP29.57■■■□□ 2.32
RBM38-201ENST00000342690 IL2RBP14784 551 aa29.57■■■□□ 2.32
RBM38-201ENST00000342690 IL13P35225 146 aa29.57■■■□□ 2.32
RBM38-201ENST00000342690 MEGF6O75095 1541 aa29.55■■■□□ 2.32
RBM38-201ENST00000342690 IGSF1Q8N6C5 1336 aa29.55■■■□□ 2.32
RBM38-201ENST00000342690 KRT27Q7Z3Y8 459 aa29.54■■■□□ 2.32
RBM38-201ENST00000342690 TNS2Q63HR2 1409 aa29.53■■■□□ 2.32
RBM38-201ENST00000342690 DIAPH1O60610 1272 aaKnown RBP29.52■■■□□ 2.32
RBM38-201ENST00000342690 DDB1Q16531 1140 aa29.52■■■□□ 2.32
RBM38-201ENST00000342690 CFAP53Q96M91 514 aa29.51■■■□□ 2.31
RBM38-201ENST00000342690 OVOS2A0A0G2JMS6 1433 aa29.5■■■□□ 2.31
RBM38-201ENST00000342690 PDE3BQ13370 1112 aa29.48■■■□□ 2.31
RBM38-201ENST00000342690 RAPGEF4Q8WZA2 1011 aa29.48■■■□□ 2.31
RBM38-201ENST00000342690 EXOC5O00471 708 aa29.47■■■□□ 2.31
RBM38-201ENST00000342690 SHANK3Q9BYB0 1731 aa29.47■■■□□ 2.31
RBM38-201ENST00000342690 TATP17735 454 aaPredicted RBP29.46■■■□□ 2.31
RBM38-201ENST00000342690 FAM182BQ5T319 152 aa29.46■■■□□ 2.31
RBM38-201ENST00000342690 AEBP1Q8IUX7 1158 aa29.45■■■□□ 2.31
RBM38-201ENST00000342690 PKD1L3Q7Z443 1732 aa29.44■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms