RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 PARD3Q8TEW0 1356 aa28.03■■■□□ 2.08
RTCA-201ENST00000260563 SMG6Q86US8 1419 aaKnown RBP28.02■■■□□ 2.08
RTCA-201ENST00000260563 CAMTA1Q9Y6Y1 1673 aa28.01■■■□□ 2.08
RTCA-201ENST00000260563 KIF24Q5T7B8 1368 aa28.01■■■□□ 2.07
RTCA-201ENST00000260563 AMPHP49418 695 aa28■■■□□ 2.07
RTCA-201ENST00000260563 EMILIN1Q9Y6C2 1016 aa28■■■□□ 2.07
RTCA-201ENST00000260563 AFF2P51816 1311 aa28■■■□□ 2.07
RTCA-201ENST00000260563 FAM208AQ9UK61 1670 aaKnown RBP28■■■□□ 2.07
RTCA-201ENST00000260563 FLT4P35916 1363 aa27.99■■■□□ 2.07
RTCA-201ENST00000260563 BLMP54132 1417 aaPredicted RBP27.99■■■□□ 2.07
RTCA-201ENST00000260563 BTG4Q9NY30 223 aa27.99■■■□□ 2.07
RTCA-201ENST00000260563 RALBP1Q15311 655 aa27.98■■■□□ 2.07
RTCA-201ENST00000260563 POLKQ9UBT6 870 aa27.98■■■□□ 2.07
RTCA-201ENST00000260563 COL5A2P05997 1499 aaPredicted RBP27.98■■■□□ 2.07
RTCA-201ENST00000260563 CDK12Q9NYV4 1490 aaPredicted RBP27.98■■■□□ 2.07
RTCA-201ENST00000260563 FNBP4Q8N3X1 1017 aaPredicted RBP27.97■■■□□ 2.07
RTCA-201ENST00000260563 BCL9LQ86UU0 1499 aa27.96■■■□□ 2.07
RTCA-201ENST00000260563 PPM1GO15355 546 aaPredicted RBP27.96■■■□□ 2.07
RTCA-201ENST00000260563 HOXC9P31274 260 aa27.96■■■□□ 2.07
RTCA-201ENST00000260563 IP6K1Q92551 441 aa27.96■■■□□ 2.07
RTCA-201ENST00000260563 PHF23Q9BUL5 403 aaPredicted RBP27.96■■■□□ 2.07
RTCA-201ENST00000260563 USP21Q9UK80 565 aa27.95■■■□□ 2.06
RTCA-201ENST00000260563 AXIN2Q9Y2T1 843 aa27.94■■■□□ 2.06
RTCA-201ENST00000260563 RGPD2P0DJD1 1756 aa27.93■■■□□ 2.06
RTCA-201ENST00000260563 UNC5CLQ8IV45 518 aa27.92■■■□□ 2.06
RTCA-201ENST00000260563 PPP2R1AP30153 589 aa27.92■■■□□ 2.06
RTCA-201ENST00000260563 INSRP06213 1382 aa27.91■■■□□ 2.06
RTCA-201ENST00000260563 CCER2I3L3R5 266 aa27.9■■■□□ 2.06
RTCA-201ENST00000260563 ZNF772Q68DY9 489 aaPredicted RBP27.9■■■□□ 2.06
RTCA-201ENST00000260563 STRN4Q9NRL3 753 aa27.9■■■□□ 2.06
RTCA-201ENST00000260563 ERBB3P21860 1342 aa27.89■■■□□ 2.06
RTCA-201ENST00000260563 MYBBP1AQ9BQG0 1328 aaKnown RBP27.89■■■□□ 2.06
RTCA-201ENST00000260563 MTHFSP49914 203 aa27.89■■■□□ 2.06
RTCA-201ENST00000260563 EVA1CP58658 441 aa27.89■■■□□ 2.06
RTCA-201ENST00000260563 HSP90AB2PQ58FF8 381 aa27.88■■■□□ 2.05
RTCA-201ENST00000260563 ATRNO75882 1429 aa27.87■■■□□ 2.05
RTCA-201ENST00000260563 WNK3Q9BYP7 1800 aa27.87■■■□□ 2.05
RTCA-201ENST00000260563 ANKRD24Q8TF21 1146 aa27.87■■■□□ 2.05
RTCA-201ENST00000260563 WDR17Q8IZU2 1322 aa27.86■■■□□ 2.05
RTCA-201ENST00000260563 CSB-PGBD3P0DP91 1061 aa27.86■■■□□ 2.05
RTCA-201ENST00000260563 CRB1P82279 1406 aa27.85■■■□□ 2.05
RTCA-201ENST00000260563 LTV1Q96GA3 475 aaPredicted RBP27.85■■■□□ 2.05
RTCA-201ENST00000260563 TRPC5Q9UL62 973 aaPredicted RBP27.84■■■□□ 2.05
RTCA-201ENST00000260563 COL3A1P02461 1466 aaPredicted RBP27.84■■■□□ 2.05
RTCA-201ENST00000260563 VPS72Q15906 364 aa27.83■■■□□ 2.05
RTCA-201ENST00000260563 LARP1Q6PKG0 1096 aaKnown RBP27.82■■■□□ 2.04
RTCA-201ENST00000260563 GLI3P10071 1580 aa27.82■■■□□ 2.04
RTCA-201ENST00000260563 TOM1L2Q6ZVM7 507 aa27.82■■■□□ 2.04
RTCA-201ENST00000260563 RGS17Q9UGC6 210 aaPredicted RBP27.82■■■□□ 2.04
RTCA-201ENST00000260563 CCDC9Q9Y3X0 531 aaKnown RBP27.82■■■□□ 2.04
RTCA-201ENST00000260563 RGPD1P0DJD0 1748 aa27.81■■■□□ 2.04
RTCA-201ENST00000260563 CFAP53Q96M91 514 aa27.81■■■□□ 2.04
RTCA-201ENST00000260563 QTRT2Q9H974 415 aaKnown RBP27.8■■■□□ 2.04
RTCA-201ENST00000260563 EIF4A2Q14240 407 aaKnown RBP27.78■■■□□ 2.04
RTCA-201ENST00000260563 SPATA31A5Q5VU36 1347 aa27.78■■■□□ 2.04
RTCA-201ENST00000260563 SPATA31A7Q8IWB4 1347 aa27.78■■■□□ 2.04
RTCA-201ENST00000260563 NLRP2Q9NX02 1062 aa27.77■■■□□ 2.04
RTCA-201ENST00000260563 SPATA31A1Q5TZJ5 1347 aa27.76■■■□□ 2.04
RTCA-201ENST00000260563 CCDC184Q52MB2 194 aa27.76■■■□□ 2.03
RTCA-201ENST00000260563 DIAPH1O60610 1272 aaKnown RBP27.75■■■□□ 2.03
RTCA-201ENST00000260563 GJD4Q96KN9 370 aaPredicted RBP27.75■■■□□ 2.03
RTCA-201ENST00000260563 CARD10Q9BWT7 1032 aa27.75■■■□□ 2.03
RTCA-201ENST00000260563 MRS2Q9HD23 443 aa27.75■■■□□ 2.03
RTCA-201ENST00000260563 USP35Q9P2H5 1018 aa27.75■■■□□ 2.03
RTCA-201ENST00000260563 PARP4Q9UKK3 1724 aaKnown RBP27.74■■■□□ 2.03
RTCA-201ENST00000260563 IL13P35225 146 aa27.72■■■□□ 2.03
RTCA-201ENST00000260563 POTEAQ6S8J7 498 aa27.72■■■□□ 2.03
RTCA-201ENST00000260563 NBPF6Q5VWK0 638 aa27.72■■■□□ 2.03
RTCA-201ENST00000260563 TCP11L2Q8N4U5 519 aa27.72■■■□□ 2.03
RTCA-201ENST00000260563 NBPF4Q96M43 638 aa27.72■■■□□ 2.03
RTCA-201ENST00000260563 THSD7AQ9UPZ6 1657 aa27.72■■■□□ 2.03
RTCA-201ENST00000260563 NCAPD2Q15021 1401 aa27.71■■■□□ 2.03
RTCA-201ENST00000260563 RBM6P78332 1123 aaKnown RBP27.71■■■□□ 2.03
RTCA-201ENST00000260563 THRAP3Q9Y2W1 955 aaKnown RBP27.71■■■□□ 2.03
RTCA-201ENST00000260563 IGSF1Q8N6C5 1336 aa27.69■■■□□ 2.02
RTCA-201ENST00000260563 EYA1Q99502 592 aa27.69■■■□□ 2.02
RTCA-201ENST00000260563 RXRBP28702 533 aa27.68■■■□□ 2.02
RTCA-201ENST00000260563 USHBP1Q8N6Y0 703 aa27.68■■■□□ 2.02
RTCA-201ENST00000260563 LRRC37A3O60309 1634 aa27.68■■■□□ 2.02
RTCA-201ENST00000260563 NUDCQ9Y266 331 aa27.67■■■□□ 2.02
RTCA-201ENST00000260563 FAM98CQ17RN3 349 aaKnown RBP27.66■■■□□ 2.02
RTCA-201ENST00000260563 BARGINQ6ZT62 677 aa27.66■■■□□ 2.02
RTCA-201ENST00000260563 U2SURPO15042 1029 aaKnown RBP27.65■■■□□ 2.02
RTCA-201ENST00000260563 DISP2A7MBM2 1401 aa27.65■■■□□ 2.02
RTCA-201ENST00000260563 BRWD3Q6RI45 1802 aa27.65■■■□□ 2.02
RTCA-201ENST00000260563 MEGF6O75095 1541 aa27.63■■■□□ 2.01
RTCA-201ENST00000260563 PKD1L3Q7Z443 1732 aa27.62■■■□□ 2.01
RTCA-201ENST00000260563 RGS12O14924 1447 aa27.62■■■□□ 2.01
RTCA-201ENST00000260563 A0A0G2JS52 829 aa27.62■■■□□ 2.01
RTCA-201ENST00000260563 IL2RBP14784 551 aa27.62■■■□□ 2.01
RTCA-201ENST00000260563 MYT1Q01538 1121 aa27.62■■■□□ 2.01
RTCA-201ENST00000260563 KDRP35968 1356 aa27.61■■■□□ 2.01
RTCA-201ENST00000260563 SHANK3Q9BYB0 1731 aa27.61■■■□□ 2.01
RTCA-201ENST00000260563 CDCA7Q9BWT1 371 aaPredicted RBP27.61■■■□□ 2.01
RTCA-201ENST00000260563 SULT6B1Q6IMI4 303 aa27.6■■■□□ 2.01
RTCA-201ENST00000260563 RAPGEF4Q8WZA2 1011 aa27.59■■■□□ 2.01
RTCA-201ENST00000260563 U2AF1L5P0DN76 240 aaPredicted RBP27.58■■■□□ 2.01
RTCA-201ENST00000260563 U2AF1Q01081 240 aaKnown RBP eCLIP27.58■■■□□ 2.01
RTCA-201ENST00000260563 AEBP1Q8IUX7 1158 aa27.58■■■□□ 2.01
RTCA-201ENST00000260563 PNISRQ8TF01 805 aaKnown RBP27.58■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms