RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 NRAPQ86VF7 1730 aa19.12■□□□□ 0.65
VPS25-201ENST00000253794 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.12■□□□□ 0.65
VPS25-201ENST00000253794 PPP2R1AP30153 589 aa19.12■□□□□ 0.65
VPS25-201ENST00000253794 HOXC9P31274 260 aa19.12■□□□□ 0.65
VPS25-201ENST00000253794 BCL9LQ86UU0 1499 aa19.11■□□□□ 0.65
VPS25-201ENST00000253794 TNNT2P45379 298 aaPredicted RBP19.11■□□□□ 0.65
VPS25-201ENST00000253794 CHRNA2Q15822 529 aa19.11■□□□□ 0.65
VPS25-201ENST00000253794 MEX3CQ5U5Q3 659 aaKnown RBP19.11■□□□□ 0.65
VPS25-201ENST00000253794 AXIN2Q9Y2T1 843 aa19.11■□□□□ 0.65
VPS25-201ENST00000253794 COL5A2P05997 1499 aaPredicted RBP19.1■□□□□ 0.65
VPS25-201ENST00000253794 AMPHP49418 695 aa19.1■□□□□ 0.65
VPS25-201ENST00000253794 C8orf37Q96NL8 207 aa19.1■□□□□ 0.65
VPS25-201ENST00000253794 MYBBP1AQ9BQG0 1328 aaKnown RBP19.09■□□□□ 0.65
VPS25-201ENST00000253794 NGLY1Q96IV0 654 aa19.09■□□□□ 0.65
VPS25-201ENST00000253794 ERBB3P21860 1342 aa19.08■□□□□ 0.65
VPS25-201ENST00000253794 MTHFSP49914 203 aa19.08■□□□□ 0.64
VPS25-201ENST00000253794 BTG4Q9NY30 223 aa19.08■□□□□ 0.64
VPS25-201ENST00000253794 COL3A1P02461 1466 aaPredicted RBP19.08■□□□□ 0.64
VPS25-201ENST00000253794 AFF2P51816 1311 aa19.07■□□□□ 0.64
VPS25-201ENST00000253794 ANP32CO43423 234 aa19.07■□□□□ 0.64
VPS25-201ENST00000253794 UNC5CLQ8IV45 518 aa19.07■□□□□ 0.64
VPS25-201ENST00000253794 CNGB1Q14028 1251 aaPredicted RBP19.06■□□□□ 0.64
VPS25-201ENST00000253794 HSP90AB2PQ58FF8 381 aa19.06■□□□□ 0.64
VPS25-201ENST00000253794 WDR17Q8IZU2 1322 aa19.05■□□□□ 0.64
VPS25-201ENST00000253794 FAM208AQ9UK61 1670 aaKnown RBP19.05■□□□□ 0.64
VPS25-201ENST00000253794 ZBTB7CA1YPR0 619 aa19.05■□□□□ 0.64
VPS25-201ENST00000253794 DIEXFQ68CQ4 756 aaKnown RBP19.05■□□□□ 0.64
VPS25-201ENST00000253794 ATRNO75882 1429 aa19.05■□□□□ 0.64
VPS25-201ENST00000253794 RGPD5Q99666 1765 aa19.04■□□□□ 0.64
VPS25-201ENST00000253794 USP21Q9UK80 565 aa19.04■□□□□ 0.64
VPS25-201ENST00000253794 NCAPD2Q15021 1401 aa19.03■□□□□ 0.64
VPS25-201ENST00000253794 VPS72Q15906 364 aa19.03■□□□□ 0.64
VPS25-201ENST00000253794 ZNF772Q68DY9 489 aaPredicted RBP19.03■□□□□ 0.64
VPS25-201ENST00000253794 ANKRD24Q8TF21 1146 aa19.03■□□□□ 0.64
VPS25-201ENST00000253794 CRB1P82279 1406 aa19.02■□□□□ 0.64
VPS25-201ENST00000253794 PPM1GO15355 546 aaPredicted RBP19.02■□□□□ 0.64
VPS25-201ENST00000253794 EIF4A2Q14240 407 aaKnown RBP19.01■□□□□ 0.63
VPS25-201ENST00000253794 IL13P35225 146 aa19■□□□□ 0.63
VPS25-201ENST00000253794 CFAP53Q96M91 514 aa19■□□□□ 0.63
VPS25-201ENST00000253794 RGS17Q9UGC6 210 aaPredicted RBP19■□□□□ 0.63
VPS25-201ENST00000253794 RGPD1P0DJD0 1748 aa19■□□□□ 0.63
VPS25-201ENST00000253794 SPATA31A5Q5VU36 1347 aa19■□□□□ 0.63
VPS25-201ENST00000253794 SPATA31A7Q8IWB4 1347 aa19■□□□□ 0.63
VPS25-201ENST00000253794 EVA1CP58658 441 aa18.99■□□□□ 0.63
VPS25-201ENST00000253794 LARP1Q6PKG0 1096 aaKnown RBP18.99■□□□□ 0.63
VPS25-201ENST00000253794 CARD10Q9BWT7 1032 aa18.99■□□□□ 0.63
VPS25-201ENST00000253794 TRPC5Q9UL62 973 aaPredicted RBP18.99■□□□□ 0.63
VPS25-201ENST00000253794 STRN4Q9NRL3 753 aa18.98■□□□□ 0.63
VPS25-201ENST00000253794 SPATA31A1Q5TZJ5 1347 aa18.98■□□□□ 0.63
VPS25-201ENST00000253794 IGSF1Q8N6C5 1336 aa18.98■□□□□ 0.63
VPS25-201ENST00000253794 DIAPH1O60610 1272 aaKnown RBP18.97■□□□□ 0.63
VPS25-201ENST00000253794 PLEKHG2Q9H7P9 1386 aa18.96■□□□□ 0.63
VPS25-201ENST00000253794 THRAP3Q9Y2W1 955 aaKnown RBP18.96■□□□□ 0.63
VPS25-201ENST00000253794 GLI3P10071 1580 aa18.96■□□□□ 0.63
VPS25-201ENST00000253794 KDRP35968 1356 aa18.95■□□□□ 0.62
VPS25-201ENST00000253794 CSB-PGBD3P0DP91 1061 aa18.95■□□□□ 0.62
VPS25-201ENST00000253794 NBPF6Q5VWK0 638 aa18.95■□□□□ 0.62
VPS25-201ENST00000253794 TOM1L2Q6ZVM7 507 aa18.95■□□□□ 0.62
VPS25-201ENST00000253794 NBPF4Q96M43 638 aa18.95■□□□□ 0.62
VPS25-201ENST00000253794 EYA1Q99502 592 aa18.95■□□□□ 0.62
VPS25-201ENST00000253794 QTRT2Q9H974 415 aaKnown RBP18.95■□□□□ 0.62
VPS25-201ENST00000253794 DISP2A7MBM2 1401 aa18.94■□□□□ 0.62
VPS25-201ENST00000253794 LTV1Q96GA3 475 aaPredicted RBP18.94■□□□□ 0.62
VPS25-201ENST00000253794 GJD4Q96KN9 370 aaPredicted RBP18.94■□□□□ 0.62
VPS25-201ENST00000253794 PHF23Q9BUL5 403 aaPredicted RBP18.94■□□□□ 0.62
VPS25-201ENST00000253794 BARGINQ6ZT62 677 aa18.93■□□□□ 0.62
VPS25-201ENST00000253794 NLRP2Q9NX02 1062 aa18.93■□□□□ 0.62
VPS25-201ENST00000253794 RGPD2P0DJD1 1756 aa18.93■□□□□ 0.62
VPS25-201ENST00000253794 ONECUT3O60422 494 aaPredicted RBP18.92■□□□□ 0.62
VPS25-201ENST00000253794 TCP11L2Q8N4U5 519 aa18.92■□□□□ 0.62
VPS25-201ENST00000253794 NUDCQ9Y266 331 aa18.92■□□□□ 0.62
VPS25-201ENST00000253794 WNK3Q9BYP7 1800 aa18.91■□□□□ 0.62
VPS25-201ENST00000253794 CCER2I3L3R5 266 aa18.91■□□□□ 0.62
VPS25-201ENST00000253794 RBM6P78332 1123 aaKnown RBP18.91■□□□□ 0.62
VPS25-201ENST00000253794 POTEAQ6S8J7 498 aa18.91■□□□□ 0.62
VPS25-201ENST00000253794 THSD7AQ9UPZ6 1657 aa18.91■□□□□ 0.62
VPS25-201ENST00000253794 CDCA7Q9BWT1 371 aaPredicted RBP18.9■□□□□ 0.62
VPS25-201ENST00000253794 CCDC184Q52MB2 194 aa18.89■□□□□ 0.61
VPS25-201ENST00000253794 CCDC9Q9Y3X0 531 aaKnown RBP18.88■□□□□ 0.61
VPS25-201ENST00000253794 PARP4Q9UKK3 1724 aaKnown RBP18.88■□□□□ 0.61
VPS25-201ENST00000253794 OVOS2A0A0G2JMS6 1433 aa18.87■□□□□ 0.61
VPS25-201ENST00000253794 MEGF6O75095 1541 aa18.86■□□□□ 0.61
VPS25-201ENST00000253794 IL2RBP14784 551 aa18.86■□□□□ 0.61
VPS25-201ENST00000253794 RXRBP28702 533 aa18.86■□□□□ 0.61
VPS25-201ENST00000253794 MIER1Q8N108 512 aa18.86■□□□□ 0.61
VPS25-201ENST00000253794 USHBP1Q8N6Y0 703 aa18.86■□□□□ 0.61
VPS25-201ENST00000253794 MRS2Q9HD23 443 aa18.86■□□□□ 0.61
VPS25-201ENST00000253794 FCHSD2O94868 740 aa18.85■□□□□ 0.61
VPS25-201ENST00000253794 SULT6B1Q6IMI4 303 aa18.85■□□□□ 0.61
VPS25-201ENST00000253794 AEBP1Q8IUX7 1158 aa18.85■□□□□ 0.61
VPS25-201ENST00000253794 PNISRQ8TF01 805 aaKnown RBP18.85■□□□□ 0.61
VPS25-201ENST00000253794 USP35Q9P2H5 1018 aa18.85■□□□□ 0.61
VPS25-201ENST00000253794 U2SURPO15042 1029 aaKnown RBP18.84■□□□□ 0.61
VPS25-201ENST00000253794 FAM98CQ17RN3 349 aaKnown RBP18.84■□□□□ 0.61
VPS25-201ENST00000253794 RSPH6AQ9H0K4 717 aa18.84■□□□□ 0.61
VPS25-201ENST00000253794 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.84■□□□□ 0.61
VPS25-201ENST00000253794 PKD1L3Q7Z443 1732 aa18.83■□□□□ 0.61
VPS25-201ENST00000253794 LRRC37A3O60309 1634 aa18.83■□□□□ 0.61
VPS25-201ENST00000253794 U2AF1L5P0DN76 240 aaPredicted RBP18.83■□□□□ 0.6
VPS25-201ENST00000253794 U2AF1Q01081 240 aaKnown RBP eCLIP18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms