RNA–Protein interactions for RNA: ENST00000252486.8

APOE-201, Transcript of apolipoprotein E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOE, Length 1,208 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-201ENST00000252486 BLMP54132 1417 aaPredicted RBP30.91■■■□□ 2.54
APOE-201ENST00000252486 RALBP1Q15311 655 aa30.91■■■□□ 2.54
APOE-201ENST00000252486 ZNF772Q68DY9 489 aaPredicted RBP30.91■■■□□ 2.54
APOE-201ENST00000252486 USP21Q9UK80 565 aa30.91■■■□□ 2.54
APOE-201ENST00000252486 FLT4P35916 1363 aa30.91■■■□□ 2.54
APOE-201ENST00000252486 PARD3Q8TEW0 1356 aa30.91■■■□□ 2.54
APOE-201ENST00000252486 CAMTA1Q9Y6Y1 1673 aa30.9■■■□□ 2.54
APOE-201ENST00000252486 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.9■■■□□ 2.54
APOE-201ENST00000252486 UNC5CLQ8IV45 518 aa30.9■■■□□ 2.54
APOE-201ENST00000252486 SMG6Q86US8 1419 aaKnown RBP30.9■■■□□ 2.54
APOE-201ENST00000252486 BCL9LQ86UU0 1499 aa30.89■■■□□ 2.53
APOE-201ENST00000252486 HOXC9P31274 260 aa30.88■■■□□ 2.53
APOE-201ENST00000252486 EMILIN1Q9Y6C2 1016 aa30.88■■■□□ 2.53
APOE-201ENST00000252486 NRAPQ86VF7 1730 aa30.87■■■□□ 2.53
APOE-201ENST00000252486 EVA1CP58658 441 aa30.87■■■□□ 2.53
APOE-201ENST00000252486 AXIN2Q9Y2T1 843 aa30.87■■■□□ 2.53
APOE-201ENST00000252486 COL5A2P05997 1499 aaPredicted RBP30.86■■■□□ 2.53
APOE-201ENST00000252486 INSRP06213 1382 aa30.85■■■□□ 2.53
APOE-201ENST00000252486 PPM1GO15355 546 aaPredicted RBP30.85■■■□□ 2.53
APOE-201ENST00000252486 PEAK1Q9H792 1746 aa30.84■■■□□ 2.53
APOE-201ENST00000252486 TRPC5Q9UL62 973 aaPredicted RBP30.84■■■□□ 2.53
APOE-201ENST00000252486 RGPD5Q99666 1765 aa30.84■■■□□ 2.53
APOE-201ENST00000252486 CDK12Q9NYV4 1490 aaPredicted RBP30.83■■■□□ 2.53
APOE-201ENST00000252486 STRN4Q9NRL3 753 aa30.82■■■□□ 2.52
APOE-201ENST00000252486 ERBB3P21860 1342 aa30.81■■■□□ 2.52
APOE-201ENST00000252486 PPP2R1AP30153 589 aa30.81■■■□□ 2.52
APOE-201ENST00000252486 MTHFSP49914 203 aa30.81■■■□□ 2.52
APOE-201ENST00000252486 VPS72Q15906 364 aa30.81■■■□□ 2.52
APOE-201ENST00000252486 PRKRIP1Q9H875 184 aaPredicted RBP30.81■■■□□ 2.52
APOE-201ENST00000252486 ATRNO75882 1429 aa30.81■■■□□ 2.52
APOE-201ENST00000252486 WDR17Q8IZU2 1322 aa30.8■■■□□ 2.52
APOE-201ENST00000252486 ANKRD24Q8TF21 1146 aa30.8■■■□□ 2.52
APOE-201ENST00000252486 HSP90AB2PQ58FF8 381 aa30.79■■■□□ 2.52
APOE-201ENST00000252486 QTRT2Q9H974 415 aaKnown RBP30.79■■■□□ 2.52
APOE-201ENST00000252486 ANP32CO43423 234 aa30.78■■■□□ 2.52
APOE-201ENST00000252486 CSB-PGBD3P0DP91 1061 aa30.78■■■□□ 2.52
APOE-201ENST00000252486 RGS17Q9UGC6 210 aaPredicted RBP30.78■■■□□ 2.52
APOE-201ENST00000252486 FAM208AQ9UK61 1670 aaKnown RBP30.78■■■□□ 2.52
APOE-201ENST00000252486 MYBBP1AQ9BQG0 1328 aaKnown RBP30.76■■■□□ 2.52
APOE-201ENST00000252486 CRB1P82279 1406 aa30.76■■■□□ 2.51
APOE-201ENST00000252486 LARP1Q6PKG0 1096 aaKnown RBP30.75■■■□□ 2.51
APOE-201ENST00000252486 CFAP53Q96M91 514 aa30.75■■■□□ 2.51
APOE-201ENST00000252486 CCDC9Q9Y3X0 531 aaKnown RBP30.75■■■□□ 2.51
APOE-201ENST00000252486 TOM1L2Q6ZVM7 507 aa30.74■■■□□ 2.51
APOE-201ENST00000252486 LTV1Q96GA3 475 aaPredicted RBP30.74■■■□□ 2.51
APOE-201ENST00000252486 SPATA31A5Q5VU36 1347 aa30.73■■■□□ 2.51
APOE-201ENST00000252486 SPATA31A7Q8IWB4 1347 aa30.73■■■□□ 2.51
APOE-201ENST00000252486 GJD4Q96KN9 370 aaPredicted RBP30.72■■■□□ 2.51
APOE-201ENST00000252486 CARD10Q9BWT7 1032 aa30.72■■■□□ 2.51
APOE-201ENST00000252486 THRAP3Q9Y2W1 955 aaKnown RBP30.7■■■□□ 2.51
APOE-201ENST00000252486 SPATA31A1Q5TZJ5 1347 aa30.7■■■□□ 2.5
APOE-201ENST00000252486 RBM6P78332 1123 aaKnown RBP30.69■■■□□ 2.5
APOE-201ENST00000252486 NLRP2Q9NX02 1062 aa30.69■■■□□ 2.5
APOE-201ENST00000252486 EIF4A2Q14240 407 aaKnown RBP30.68■■■□□ 2.5
APOE-201ENST00000252486 POTEAQ6S8J7 498 aa30.68■■■□□ 2.5
APOE-201ENST00000252486 RXRBP28702 533 aa30.67■■■□□ 2.5
APOE-201ENST00000252486 DIAPH1O60610 1272 aaKnown RBP30.66■■■□□ 2.5
APOE-201ENST00000252486 TCP11L2Q8N4U5 519 aa30.66■■■□□ 2.5
APOE-201ENST00000252486 DIEXFQ68CQ4 756 aaKnown RBP30.65■■■□□ 2.5
APOE-201ENST00000252486 GLI3P10071 1580 aa30.64■■■□□ 2.5
APOE-201ENST00000252486 COL3A1P02461 1466 aaPredicted RBP30.63■■■□□ 2.49
APOE-201ENST00000252486 IL13P35225 146 aa30.63■■■□□ 2.49
APOE-201ENST00000252486 BARGINQ6ZT62 677 aa30.63■■■□□ 2.49
APOE-201ENST00000252486 USP35Q9P2H5 1018 aa30.63■■■□□ 2.49
APOE-201ENST00000252486 NBPF6Q5VWK0 638 aa30.61■■■□□ 2.49
APOE-201ENST00000252486 NBPF4Q96M43 638 aa30.61■■■□□ 2.49
APOE-201ENST00000252486 NUDCQ9Y266 331 aa30.61■■■□□ 2.49
APOE-201ENST00000252486 EYA1Q99502 592 aa30.6■■■□□ 2.49
APOE-201ENST00000252486 CDCA7Q9BWT1 371 aaPredicted RBP30.6■■■□□ 2.49
APOE-201ENST00000252486 RGPD2P0DJD1 1756 aa30.59■■■□□ 2.49
APOE-201ENST00000252486 NCAPD2Q15021 1401 aa30.59■■■□□ 2.49
APOE-201ENST00000252486 IGSF1Q8N6C5 1336 aa30.59■■■□□ 2.49
APOE-201ENST00000252486 ONECUT3O60422 494 aaPredicted RBP30.58■■■□□ 2.49
APOE-201ENST00000252486 FAM98CQ17RN3 349 aaKnown RBP30.57■■■□□ 2.48
APOE-201ENST00000252486 RGPD1P0DJD0 1748 aa30.56■■■□□ 2.48
APOE-201ENST00000252486 WNK3Q9BYP7 1800 aa30.54■■■□□ 2.48
APOE-201ENST00000252486 IL2RBP14784 551 aa30.53■■■□□ 2.48
APOE-201ENST00000252486 DISP2A7MBM2 1401 aa30.53■■■□□ 2.48
APOE-201ENST00000252486 USHBP1Q8N6Y0 703 aa30.52■■■□□ 2.48
APOE-201ENST00000252486 RAPGEF4Q8WZA2 1011 aa30.52■■■□□ 2.48
APOE-201ENST00000252486 THSD7AQ9UPZ6 1657 aa30.52■■■□□ 2.48
APOE-201ENST00000252486 U2SURPO15042 1029 aaKnown RBP30.51■■■□□ 2.47
APOE-201ENST00000252486 A0A0G2JS52 829 aa30.5■■■□□ 2.47
APOE-201ENST00000252486 MYT1Q01538 1121 aa30.5■■■□□ 2.47
APOE-201ENST00000252486 KDRP35968 1356 aa30.5■■■□□ 2.47
APOE-201ENST00000252486 PLEKHG2Q9H7P9 1386 aa30.5■■■□□ 2.47
APOE-201ENST00000252486 SEPT12Q8IYM1 358 aa30.49■■■□□ 2.47
APOE-201ENST00000252486 PARP4Q9UKK3 1724 aaKnown RBP30.48■■■□□ 2.47
APOE-201ENST00000252486 TATP17735 454 aaPredicted RBP30.48■■■□□ 2.47
APOE-201ENST00000252486 SULT6B1Q6IMI4 303 aa30.48■■■□□ 2.47
APOE-201ENST00000252486 RGS12O14924 1447 aa30.47■■■□□ 2.47
APOE-201ENST00000252486 U2AF1L5P0DN76 240 aaPredicted RBP30.45■■■□□ 2.47
APOE-201ENST00000252486 U2AF1Q01081 240 aaKnown RBP eCLIP30.45■■■□□ 2.47
APOE-201ENST00000252486 OVOS2A0A0G2JMS6 1433 aa30.45■■■□□ 2.46
APOE-201ENST00000252486 MEGF6O75095 1541 aa30.44■■■□□ 2.46
APOE-201ENST00000252486 EXOC5O00471 708 aa30.43■■■□□ 2.46
APOE-201ENST00000252486 DDB1Q16531 1140 aa30.43■■■□□ 2.46
APOE-201ENST00000252486 WDR43Q15061 677 aaKnown RBP eCLIP30.42■■■□□ 2.461e-6■□□□□ 8.2
APOE-201ENST00000252486 AEBP1Q8IUX7 1158 aa30.42■■■□□ 2.46
APOE-201ENST00000252486 MRS2Q9HD23 443 aa30.42■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms