RNA–Protein interactions for RNA: ENST00000225983.10

HDAC5-201, Transcript of histone deacetylase 5, humanhuman

APPRIS P3 TSL 5 BASIC

Gene HDAC5, Length 5,326 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-201ENST00000225983 RARSP54136 660 aaKnown RBP19.34■□□□□ 0.69
HDAC5-201ENST00000225983 CCDC70Q6NSX1 233 aa19.34■□□□□ 0.69
HDAC5-201ENST00000225983 TBC1D2BQ9UPU7 963 aa19.34■□□□□ 0.69
HDAC5-201ENST00000225983 NUDT16Q96DE0 195 aaKnown RBP19.34■□□□□ 0.69
HDAC5-201ENST00000225983 NCOA1Q15788 1441 aa19.34■□□□□ 0.69
HDAC5-201ENST00000225983 PDCP20941 246 aa19.33■□□□□ 0.69
HDAC5-201ENST00000225983 GPS2Q13227 327 aa19.33■□□□□ 0.69
HDAC5-201ENST00000225983 THEMISQ8N1K5 641 aaPredicted RBP19.33■□□□□ 0.69
HDAC5-201ENST00000225983 CWC22Q9HCG8 908 aaKnown RBP19.33■□□□□ 0.69
HDAC5-201ENST00000225983 MCM10Q7L590 875 aa19.33■□□□□ 0.68
HDAC5-201ENST00000225983 SSH1Q8WYL5 1049 aa19.33■□□□□ 0.68
HDAC5-201ENST00000225983 OLFM4Q6UX06 510 aa19.33■□□□□ 0.68
HDAC5-201ENST00000225983 FMNL2Q96PY5 1086 aa19.33■□□□□ 0.68
HDAC5-201ENST00000225983 LETM1O95202 739 aaPredicted RBP19.32■□□□□ 0.68
HDAC5-201ENST00000225983 KIF6Q6ZMV9 814 aa19.32■□□□□ 0.68
HDAC5-201ENST00000225983 PDILTQ8N807 584 aa19.32■□□□□ 0.68
HDAC5-201ENST00000225983 KINO60870 393 aaKnown RBP19.32■□□□□ 0.68
HDAC5-201ENST00000225983 MAP3K1Q13233 1512 aa19.32■□□□□ 0.68
HDAC5-201ENST00000225983 MPNDQ8N594 471 aa19.32■□□□□ 0.68
HDAC5-201ENST00000225983 ADGRF5Q8IZF2 1346 aa19.31■□□□□ 0.68
HDAC5-201ENST00000225983 RRP12Q5JTH9 1297 aaKnown RBP19.31■□□□□ 0.68
HDAC5-201ENST00000225983 TTC39AQ5SRH9 613 aa19.31■□□□□ 0.68
HDAC5-201ENST00000225983 AACSQ86V21 672 aa19.31■□□□□ 0.68
HDAC5-201ENST00000225983 TCEAL9Q9UHQ7 104 aa19.31■□□□□ 0.68
HDAC5-201ENST00000225983 CUL7Q14999 1698 aa19.31■□□□□ 0.68
HDAC5-201ENST00000225983 EXOC6BQ9Y2D4 811 aa19.31■□□□□ 0.68
HDAC5-201ENST00000225983 CABP4P57796 275 aa19.31■□□□□ 0.68
HDAC5-201ENST00000225983 CCDC173Q0VFZ6 552 aa19.31■□□□□ 0.68
HDAC5-201ENST00000225983 XPCQ01831 940 aaPredicted RBP19.3■□□□□ 0.68
HDAC5-201ENST00000225983 SAMD1Q6SPF0 538 aaPredicted RBP19.3■□□□□ 0.68
HDAC5-201ENST00000225983 CWC27Q6UX04 472 aaKnown RBP19.3■□□□□ 0.68
HDAC5-201ENST00000225983 MNS1Q8NEH6 495 aa19.3■□□□□ 0.68
HDAC5-201ENST00000225983 MCM4P33991 863 aa19.3■□□□□ 0.68
HDAC5-201ENST00000225983 RPAP2Q8IXW5 612 aaPredicted RBP19.3■□□□□ 0.68
HDAC5-201ENST00000225983 SPC24Q8NBT2 197 aa19.3■□□□□ 0.68
HDAC5-201ENST00000225983 CNNM1Q9NRU3 951 aa19.3■□□□□ 0.68
HDAC5-201ENST00000225983 GRPEL1Q9HAV7 217 aa19.29■□□□□ 0.68
HDAC5-201ENST00000225983 BRMS1Q9HCU9 246 aa19.29■□□□□ 0.68
HDAC5-201ENST00000225983 NKTRP30414 1462 aaKnown RBP19.29■□□□□ 0.68
HDAC5-201ENST00000225983 BTBD11A6QL63 1104 aa19.29■□□□□ 0.68
HDAC5-201ENST00000225983 CCDC158Q5M9N0 1113 aa19.29■□□□□ 0.68
HDAC5-201ENST00000225983 CCDC61Q9Y6R9 512 aa19.29■□□□□ 0.68
HDAC5-201ENST00000225983 DDX54Q8TDD1 881 aaKnown RBP19.29■□□□□ 0.68
HDAC5-201ENST00000225983 SART3Q15020 963 aaKnown RBP19.29■□□□□ 0.68
HDAC5-201ENST00000225983 MEX3CQ5U5Q3 659 aaKnown RBP19.29■□□□□ 0.68
HDAC5-201ENST00000225983 DNAJC5BQ9UF47 199 aa19.29■□□□□ 0.68
HDAC5-201ENST00000225983 SMC2O95347 1197 aa19.28■□□□□ 0.68
HDAC5-201ENST00000225983 NUTM1Q86Y26 1132 aa19.28■□□□□ 0.68
HDAC5-201ENST00000225983 WDR33Q9C0J8 1336 aaKnown RBP19.28■□□□□ 0.68
HDAC5-201ENST00000225983 SMARCA5O60264 1052 aaPredicted RBP19.28■□□□□ 0.68
HDAC5-201ENST00000225983 XBP1P17861 261 aa19.28■□□□□ 0.68
HDAC5-201ENST00000225983 RPRD2Q5VT52 1461 aaKnown RBP19.28■□□□□ 0.68
HDAC5-201ENST00000225983 STK11IPQ8N1F8 1099 aa19.27■□□□□ 0.68
HDAC5-201ENST00000225983 STK38Q15208 465 aa19.27■□□□□ 0.68
HDAC5-201ENST00000225983 CTDP1Q9Y5B0 961 aaPredicted RBP19.27■□□□□ 0.68
HDAC5-201ENST00000225983 NME9Q86XW9 330 aa19.27■□□□□ 0.68
HDAC5-201ENST00000225983 KIF14Q15058 1648 aa19.27■□□□□ 0.67
HDAC5-201ENST00000225983 DUSP27Q5VZP5 1158 aa19.26■□□□□ 0.67
HDAC5-201ENST00000225983 TOM1L2Q6ZVM7 507 aa19.26■□□□□ 0.67
HDAC5-201ENST00000225983 EMILIN1Q9Y6C2 1016 aa19.26■□□□□ 0.67
HDAC5-201ENST00000225983 LARP1BQ659C4 914 aaKnown RBP19.26■□□□□ 0.67
HDAC5-201ENST00000225983 JAKMIP1Q96N16 626 aaKnown RBP19.26■□□□□ 0.67
HDAC5-201ENST00000225983 ZNF396Q96N95 335 aaPredicted RBP19.26■□□□□ 0.67
HDAC5-201ENST00000225983 BICRAQ9NZM4 1560 aa19.26■□□□□ 0.67
HDAC5-201ENST00000225983 DISP3Q9P2K9 1392 aa19.25■□□□□ 0.67
HDAC5-201ENST00000225983 GNAT3A8MTJ3 354 aa19.25■□□□□ 0.67
HDAC5-201ENST00000225983 NAP1L1P55209 391 aaKnown RBP19.25■□□□□ 0.67
HDAC5-201ENST00000225983 AEBP1Q8IUX7 1158 aa19.25■□□□□ 0.67
HDAC5-201ENST00000225983 PDRG1Q9NUG6 133 aa19.24■□□□□ 0.67
HDAC5-201ENST00000225983 SPG7Q9UQ90 795 aa19.24■□□□□ 0.67
HDAC5-201ENST00000225983 TTLL5Q6EMB2 1281 aa19.24■□□□□ 0.67
HDAC5-201ENST00000225983 ANKRD1Q15327 319 aa19.24■□□□□ 0.67
HDAC5-201ENST00000225983 FKBP4Q02790 459 aaKnown RBP eCLIP19.23■□□□□ 0.67
HDAC5-201ENST00000225983 BLOC1S2Q6QNY1 142 aa19.23■□□□□ 0.67
HDAC5-201ENST00000225983 TNMDQ9H2S6 317 aa19.22■□□□□ 0.67
HDAC5-201ENST00000225983 CIZ1Q9ULV3 898 aaPredicted RBP19.22■□□□□ 0.67
HDAC5-201ENST00000225983 ARGLU1Q9NWB6 273 aaPredicted RBP19.22■□□□□ 0.67
HDAC5-201ENST00000225983 GRIN2AQ12879 1464 aa19.22■□□□□ 0.67
HDAC5-201ENST00000225983 LRPPRCP42704 1394 aaKnown RBP19.22■□□□□ 0.67
HDAC5-201ENST00000225983 CCDC192P0DO97 292 aa19.22■□□□□ 0.67
HDAC5-201ENST00000225983 KRT85P78386 507 aa19.22■□□□□ 0.67
HDAC5-201ENST00000225983 ME1P48163 572 aa19.21■□□□□ 0.67
HDAC5-201ENST00000225983 TEX35Q5T0J7 233 aa19.21■□□□□ 0.67
HDAC5-201ENST00000225983 ALDH1L2Q3SY69 923 aa19.21■□□□□ 0.67
HDAC5-201ENST00000225983 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.21■□□□□ 0.676e-7■■■■□ 23.4
HDAC5-201ENST00000225983 ZC3H6P61129 1189 aaKnown RBP19.21■□□□□ 0.67
HDAC5-201ENST00000225983 F6X3S4 739 aa19.21■□□□□ 0.66
HDAC5-201ENST00000225983 TRIM27P14373 513 aa19.2■□□□□ 0.66
HDAC5-201ENST00000225983 CCDC57Q2TAC2 916 aa19.2■□□□□ 0.66
HDAC5-201ENST00000225983 USHBP1Q8N6Y0 703 aa19.2■□□□□ 0.66
HDAC5-201ENST00000225983 MX1P20591 662 aa19.2■□□□□ 0.66
HDAC5-201ENST00000225983 RBM10P98175 930 aaKnown RBP19.2■□□□□ 0.66
HDAC5-201ENST00000225983 CCDC43Q96MW1 224 aaKnown RBP19.2■□□□□ 0.66
HDAC5-201ENST00000225983 ADGRL1O94910 1474 aa19.19■□□□□ 0.66
HDAC5-201ENST00000225983 CCDC85AQ96PX6 553 aaPredicted RBP19.19■□□□□ 0.66
HDAC5-201ENST00000225983 BRPF1P55201 1214 aaPredicted RBP19.19■□□□□ 0.66
HDAC5-201ENST00000225983 ANKLE2Q86XL3 938 aa19.19■□□□□ 0.66
HDAC5-201ENST00000225983 CASTP20810 708 aaKnown RBP19.19■□□□□ 0.66
HDAC5-201ENST00000225983 FBXO31Q5XUX0 539 aaPredicted RBP19.19■□□□□ 0.66
HDAC5-201ENST00000225983 UPF3BQ9BZI7 483 aaKnown RBP19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms