RNA–Protein interactions for RNA: ENST00000223129.8

RPA3-201, Transcript of replication protein A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA3, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-201ENST00000223129 HOXC9P31274 260 aa20.35■□□□□ 0.85
RPA3-201ENST00000223129 IP6K1Q92551 441 aa20.35■□□□□ 0.85
RPA3-201ENST00000223129 PEAK1Q9H792 1746 aa20.35■□□□□ 0.85
RPA3-201ENST00000223129 BCL9LQ86UU0 1499 aa20.34■□□□□ 0.85
RPA3-201ENST00000223129 PHF23Q9BUL5 403 aaPredicted RBP20.34■□□□□ 0.85
RPA3-201ENST00000223129 STRN4Q9NRL3 753 aa20.34■□□□□ 0.85
RPA3-201ENST00000223129 RGS17Q9UGC6 210 aaPredicted RBP20.34■□□□□ 0.85
RPA3-201ENST00000223129 PARD3Q8TEW0 1356 aa20.34■□□□□ 0.85
RPA3-201ENST00000223129 HSP90AB2PQ58FF8 381 aa20.33■□□□□ 0.85
RPA3-201ENST00000223129 UNC5CLQ8IV45 518 aa20.33■□□□□ 0.85
RPA3-201ENST00000223129 MTHFSP49914 203 aa20.32■□□□□ 0.84
RPA3-201ENST00000223129 EVA1CP58658 441 aa20.32■□□□□ 0.84
RPA3-201ENST00000223129 PPP2R1AP30153 589 aa20.32■□□□□ 0.84
RPA3-201ENST00000223129 LTV1Q96GA3 475 aaPredicted RBP20.32■□□□□ 0.84
RPA3-201ENST00000223129 NWD2Q9ULI1 1742 aa20.31■□□□□ 0.84
RPA3-201ENST00000223129 PRKRIP1Q9H875 184 aaPredicted RBP20.31■□□□□ 0.84
RPA3-201ENST00000223129 FLT4P35916 1363 aa20.31■□□□□ 0.84
RPA3-201ENST00000223129 RALBP1Q15311 655 aa20.31■□□□□ 0.84
RPA3-201ENST00000223129 COL5A2P05997 1499 aaPredicted RBP20.3■□□□□ 0.84
RPA3-201ENST00000223129 NRAPQ86VF7 1730 aa20.3■□□□□ 0.84
RPA3-201ENST00000223129 RTL1A6NKG5 1358 aa20.29■□□□□ 0.84
RPA3-201ENST00000223129 LARP1Q6PKG0 1096 aaKnown RBP20.29■□□□□ 0.84
RPA3-201ENST00000223129 ANKRD24Q8TF21 1146 aa20.29■□□□□ 0.84
RPA3-201ENST00000223129 ZNF772Q68DY9 489 aaPredicted RBP20.29■□□□□ 0.84
RPA3-201ENST00000223129 KIF24Q5T7B8 1368 aa20.28■□□□□ 0.84
RPA3-201ENST00000223129 BLMP54132 1417 aaPredicted RBP20.28■□□□□ 0.84
RPA3-201ENST00000223129 SMG6Q86US8 1419 aaKnown RBP20.28■□□□□ 0.84
RPA3-201ENST00000223129 QTRT2Q9H974 415 aaKnown RBP20.28■□□□□ 0.84
RPA3-201ENST00000223129 ABCC6O95255 1503 aa20.28■□□□□ 0.84
RPA3-201ENST00000223129 CSB-PGBD3P0DP91 1061 aa20.27■□□□□ 0.84
RPA3-201ENST00000223129 INSRP06213 1382 aa20.27■□□□□ 0.84
RPA3-201ENST00000223129 CCDC9Q9Y3X0 531 aaKnown RBP20.27■□□□□ 0.84
RPA3-201ENST00000223129 ERBB3P21860 1342 aa20.27■□□□□ 0.83
RPA3-201ENST00000223129 ANP32CO43423 234 aa20.26■□□□□ 0.83
RPA3-201ENST00000223129 POTEAQ6S8J7 498 aa20.26■□□□□ 0.83
RPA3-201ENST00000223129 TRPC5Q9UL62 973 aaPredicted RBP20.26■□□□□ 0.83
RPA3-201ENST00000223129 WDR17Q8IZU2 1322 aa20.25■□□□□ 0.83
RPA3-201ENST00000223129 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.25■□□□□ 0.83
RPA3-201ENST00000223129 VPS72Q15906 364 aa20.25■□□□□ 0.83
RPA3-201ENST00000223129 TOM1L2Q6ZVM7 507 aa20.25■□□□□ 0.83
RPA3-201ENST00000223129 USP35Q9P2H5 1018 aa20.25■□□□□ 0.83
RPA3-201ENST00000223129 CDK12Q9NYV4 1490 aaPredicted RBP20.24■□□□□ 0.83
RPA3-201ENST00000223129 DIEXFQ68CQ4 756 aaKnown RBP20.24■□□□□ 0.83
RPA3-201ENST00000223129 MYBBP1AQ9BQG0 1328 aaKnown RBP20.24■□□□□ 0.83
RPA3-201ENST00000223129 ATRNO75882 1429 aa20.24■□□□□ 0.83
RPA3-201ENST00000223129 EIF4A2Q14240 407 aaKnown RBP20.23■□□□□ 0.83
RPA3-201ENST00000223129 NLRP2Q9NX02 1062 aa20.23■□□□□ 0.83
RPA3-201ENST00000223129 SPATA31A5Q5VU36 1347 aa20.22■□□□□ 0.83
RPA3-201ENST00000223129 SPATA31A7Q8IWB4 1347 aa20.22■□□□□ 0.83
RPA3-201ENST00000223129 GJD4Q96KN9 370 aaPredicted RBP20.22■□□□□ 0.83
RPA3-201ENST00000223129 RGPD2P0DJD1 1756 aa20.22■□□□□ 0.83
RPA3-201ENST00000223129 CRB1P82279 1406 aa20.21■□□□□ 0.83
RPA3-201ENST00000223129 SPATA31A1Q5TZJ5 1347 aa20.21■□□□□ 0.83
RPA3-201ENST00000223129 NBPF6Q5VWK0 638 aa20.2■□□□□ 0.83
RPA3-201ENST00000223129 NBPF4Q96M43 638 aa20.2■□□□□ 0.83
RPA3-201ENST00000223129 USHBP1Q8N6Y0 703 aa20.19■□□□□ 0.82
RPA3-201ENST00000223129 IL13P35225 146 aa20.19■□□□□ 0.82
RPA3-201ENST00000223129 CFAP53Q96M91 514 aa20.19■□□□□ 0.82
RPA3-201ENST00000223129 CARD10Q9BWT7 1032 aa20.19■□□□□ 0.82
RPA3-201ENST00000223129 DIAPH1O60610 1272 aaKnown RBP20.18■□□□□ 0.82
RPA3-201ENST00000223129 EYA1Q99502 592 aa20.18■□□□□ 0.82
RPA3-201ENST00000223129 GLI3P10071 1580 aa20.18■□□□□ 0.82
RPA3-201ENST00000223129 COL3A1P02461 1466 aaPredicted RBP20.18■□□□□ 0.82
RPA3-201ENST00000223129 RBM6P78332 1123 aaKnown RBP20.17■□□□□ 0.82
RPA3-201ENST00000223129 RXRBP28702 533 aa20.17■□□□□ 0.82
RPA3-201ENST00000223129 TCP11L2Q8N4U5 519 aa20.17■□□□□ 0.82
RPA3-201ENST00000223129 FAM98CQ17RN3 349 aaKnown RBP20.16■□□□□ 0.82
RPA3-201ENST00000223129 FAM208AQ9UK61 1670 aaKnown RBP20.15■□□□□ 0.82
RPA3-201ENST00000223129 CCDC184Q52MB2 194 aa20.15■□□□□ 0.82
RPA3-201ENST00000223129 U2SURPO15042 1029 aaKnown RBP20.13■□□□□ 0.81
RPA3-201ENST00000223129 THRAP3Q9Y2W1 955 aaKnown RBP20.13■□□□□ 0.81
RPA3-201ENST00000223129 BARGINQ6ZT62 677 aa20.12■□□□□ 0.81
RPA3-201ENST00000223129 IGSF1Q8N6C5 1336 aa20.11■□□□□ 0.81
RPA3-201ENST00000223129 A0A0G2JS52 829 aa20.11■□□□□ 0.81
RPA3-201ENST00000223129 MYT1Q01538 1121 aa20.11■□□□□ 0.81
RPA3-201ENST00000223129 AEBP1Q8IUX7 1158 aa20.11■□□□□ 0.81
RPA3-201ENST00000223129 SULT6B1Q6IMI4 303 aa20.1■□□□□ 0.81
RPA3-201ENST00000223129 RGPD1P0DJD0 1748 aa20.1■□□□□ 0.81
RPA3-201ENST00000223129 ONECUT3O60422 494 aaPredicted RBP20.1■□□□□ 0.81
RPA3-201ENST00000223129 HMOX1P09601 288 aa20.1■□□□□ 0.81
RPA3-201ENST00000223129 NUDCQ9Y266 331 aa20.09■□□□□ 0.81
RPA3-201ENST00000223129 IL2RBP14784 551 aa20.09■□□□□ 0.81
RPA3-201ENST00000223129 SEPT12Q8IYM1 358 aa20.09■□□□□ 0.81
RPA3-201ENST00000223129 MIER1Q8N108 512 aa20.08■□□□□ 0.8
RPA3-201ENST00000223129 NCAPD2Q15021 1401 aa20.08■□□□□ 0.8
RPA3-201ENST00000223129 U2AF1L5P0DN76 240 aaPredicted RBP20.07■□□□□ 0.8
RPA3-201ENST00000223129 U2AF1Q01081 240 aaKnown RBP eCLIP20.07■□□□□ 0.8
RPA3-201ENST00000223129 DISP2A7MBM2 1401 aa20.07■□□□□ 0.8
RPA3-201ENST00000223129 RAPGEF4Q8WZA2 1011 aa20.07■□□□□ 0.8
RPA3-201ENST00000223129 WNK3Q9BYP7 1800 aa20.06■□□□□ 0.8
RPA3-201ENST00000223129 MEGF6O75095 1541 aa20.06■□□□□ 0.8
RPA3-201ENST00000223129 RGS12O14924 1447 aa20.06■□□□□ 0.8
RPA3-201ENST00000223129 MRS2Q9HD23 443 aa20.06■□□□□ 0.8
RPA3-201ENST00000223129 THSD7AQ9UPZ6 1657 aa20.05■□□□□ 0.8
RPA3-201ENST00000223129 TATP17735 454 aaPredicted RBP20.04■□□□□ 0.8
RPA3-201ENST00000223129 CDCA7Q9BWT1 371 aaPredicted RBP20.04■□□□□ 0.8
RPA3-201ENST00000223129 KDRP35968 1356 aa20.04■□□□□ 0.8
RPA3-201ENST00000223129 DDB1Q16531 1140 aa20.03■□□□□ 0.8
RPA3-201ENST00000223129 EXOC5O00471 708 aa20.02■□□□□ 0.8
RPA3-201ENST00000223129 BRWD3Q6RI45 1802 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms