RNA–Protein interactions for RNA: ENST00000599040.5

FARP1-226, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-226ENST00000599040 SGSHP51688 502 aa9.51□□□□□ -0.89
FARP1-226ENST00000599040 NDST2P52849 883 aa9.51□□□□□ -0.89
FARP1-226ENST00000599040 ITGA8P53708 1063 aa9.51□□□□□ -0.89
FARP1-226ENST00000599040 ARL4CP56559 192 aa9.51□□□□□ -0.89
FARP1-226ENST00000599040 BASP1P80723 227 aaKnown RBP9.51□□□□□ -0.89
FARP1-226ENST00000599040 GBE1Q04446 702 aa9.51□□□□□ -0.89
FARP1-226ENST00000599040 SULT2A1Q06520 285 aa9.51□□□□□ -0.89
FARP1-226ENST00000599040 SLC12A1Q13621 1099 aa9.51□□□□□ -0.89
FARP1-226ENST00000599040 AUHQ13825 339 aaKnown RBP9.51□□□□□ -0.89
FARP1-226ENST00000599040 PRPSAP1Q14558 356 aa9.51□□□□□ -0.89
FARP1-226ENST00000599040 SUZ12Q15022 739 aaKnown RBP9.51□□□□□ -0.89
FARP1-226ENST00000599040 PTPRNQ16849 979 aa9.51□□□□□ -0.89
FARP1-226ENST00000599040 ALS2CLQ60I27 953 aa9.51□□□□□ -0.89
FARP1-226ENST00000599040 UNQ6494/PRO21346Q6UXR6 183 aa9.51□□□□□ -0.89
FARP1-226ENST00000599040 USP30Q70CQ3 517 aa9.51□□□□□ -0.89
FARP1-226ENST00000599040 FAM124AQ86V42 546 aa9.51□□□□□ -0.89
FARP1-226ENST00000599040 CCDC25Q86WR0 208 aa9.51□□□□□ -0.89
FARP1-226ENST00000599040 ZNF354CQ86Y25 554 aa9.51□□□□□ -0.89
FARP1-226ENST00000599040 BBS5Q8N3I7 341 aa9.51□□□□□ -0.89
FARP1-226ENST00000599040 MREGQ8N565 214 aa9.51□□□□□ -0.89
FARP1-226ENST00000599040 RTL3Q8N8U3 475 aaKnown RBP9.51□□□□□ -0.89
FARP1-226ENST00000599040 GANCQ8TET4 914 aa9.51□□□□□ -0.89
FARP1-226ENST00000599040 HTR3CQ8WXA8 447 aa9.51□□□□□ -0.89
FARP1-226ENST00000599040 ART4Q93070 314 aa9.51□□□□□ -0.89
FARP1-226ENST00000599040 SKA1Q96BD8 255 aa9.51□□□□□ -0.89
FARP1-226ENST00000599040 HDAC11Q96DB2 347 aa9.51□□□□□ -0.89
FARP1-226ENST00000599040 RTP4Q96DX8 246 aa9.51□□□□□ -0.89
FARP1-226ENST00000599040 CCDC77Q9BR77 488 aa9.51□□□□□ -0.89
FARP1-226ENST00000599040 PRSS16Q9NQE7 514 aa9.51□□□□□ -0.89
FARP1-226ENST00000599040 FSCN3Q9NQT6 498 aa9.51□□□□□ -0.89
FARP1-226ENST00000599040 SEPT10Q9P0V9 454 aa9.51□□□□□ -0.89
FARP1-226ENST00000599040 SAE1Q9UBE0 346 aaPredicted RBP9.51□□□□□ -0.89
FARP1-226ENST00000599040 TRHDEQ9UKU6 1024 aa9.51□□□□□ -0.89
FARP1-226ENST00000599040 VANGL2Q9ULK5 521 aa9.51□□□□□ -0.89
FARP1-226ENST00000599040 NEUROG3Q9Y4Z2 214 aa9.51□□□□□ -0.89
FARP1-226ENST00000599040 MUC22E2RYF6 1773 aaPredicted RBP9.5□□□□□ -0.89
FARP1-226ENST00000599040 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.5□□□□□ -0.89
FARP1-226ENST00000599040 EDDM13A0A1B0GTR0 161 aa9.5□□□□□ -0.89
FARP1-226ENST00000599040 BHMG1C9JSJ3 638 aaPredicted RBP9.5□□□□□ -0.89
FARP1-226ENST00000599040 FAM72CH0Y354 149 aa9.5□□□□□ -0.89
FARP1-226ENST00000599040 AP3B1O00203 1094 aa9.5□□□□□ -0.89
FARP1-226ENST00000599040 DFFAO00273 331 aa9.5□□□□□ -0.89
FARP1-226ENST00000599040 PSMD3O43242 534 aa9.5□□□□□ -0.89
FARP1-226ENST00000599040 OPA1O60313 960 aa9.5□□□□□ -0.89
FARP1-226ENST00000599040 GCATO75600 419 aa9.5□□□□□ -0.89
FARP1-226ENST00000599040 CD59P13987 128 aa9.5□□□□□ -0.89
FARP1-226ENST00000599040 CCNCP24863 283 aa9.5□□□□□ -0.89
FARP1-226ENST00000599040 YBEYP58557 167 aaPredicted RBP9.5□□□□□ -0.89
FARP1-226ENST00000599040 RPS14P62263 151 aaKnown RBP9.5□□□□□ -0.89
FARP1-226ENST00000599040 RPS24P62847 133 aaKnown RBP9.5□□□□□ -0.89
FARP1-226ENST00000599040 CDK16Q00536 496 aa9.5□□□□□ -0.89
FARP1-226ENST00000599040 ECT2LQ008S8 904 aa9.5□□□□□ -0.89
FARP1-226ENST00000599040 DHX9Q08211 1270 aaKnown RBP9.5□□□□□ -0.89
FARP1-226ENST00000599040 IFFO1Q0D2I5 559 aa9.5□□□□□ -0.89
FARP1-226ENST00000599040 GALNT2Q10471 571 aa9.5□□□□□ -0.89
FARP1-226ENST00000599040 CASP8Q14790 479 aa9.5□□□□□ -0.89
FARP1-226ENST00000599040 HNRNPA1L2Q32P51 320 aaKnown RBP9.5□□□□□ -0.89
FARP1-226ENST00000599040 INAVAQ3KP66 663 aa9.5□□□□□ -0.89
FARP1-226ENST00000599040 PITRM1Q5JRX3 1037 aa9.5□□□□□ -0.89
FARP1-226ENST00000599040 TMCO4Q5TGY1 634 aa9.5□□□□□ -0.89
FARP1-226ENST00000599040 FAM72AQ5TYM5 149 aa9.5□□□□□ -0.89
FARP1-226ENST00000599040 RAP1GAP2Q684P5 730 aa9.5□□□□□ -0.89
FARP1-226ENST00000599040 NADSYN1Q6IA69 706 aa9.5□□□□□ -0.89
FARP1-226ENST00000599040 FAM72DQ6L9T8 149 aa9.5□□□□□ -0.89
FARP1-226ENST00000599040 CENPUQ71F23 418 aa9.5□□□□□ -0.89
FARP1-226ENST00000599040 TRMT10CQ7L0Y3 403 aaKnown RBP9.5□□□□□ -0.89
FARP1-226ENST00000599040 FAM72BQ86X60 149 aa9.5□□□□□ -0.89
FARP1-226ENST00000599040 NAXDQ8IW45 347 aa9.5□□□□□ -0.89
FARP1-226ENST00000599040 GSPT2Q8IYD1 628 aaKnown RBP9.5□□□□□ -0.89
FARP1-226ENST00000599040 CCDC13Q8IYE1 715 aa9.5□□□□□ -0.89
FARP1-226ENST00000599040 LGI2Q8N0V4 545 aa9.5□□□□□ -0.89
FARP1-226ENST00000599040 PDIK1LQ8N165 341 aa9.5□□□□□ -0.89
FARP1-226ENST00000599040 ZNF366Q8N895 744 aa9.5□□□□□ -0.89
FARP1-226ENST00000599040 FBXO25Q8TCJ0 367 aa9.5□□□□□ -0.89
FARP1-226ENST00000599040 WFDC5Q8TCV5 224 aa9.5□□□□□ -0.89
FARP1-226ENST00000599040 UBLCP1Q8WVY7 318 aaPredicted RBP9.5□□□□□ -0.89
FARP1-226ENST00000599040 PRICKLE1Q96MT3 831 aaPredicted RBP9.5□□□□□ -0.89
FARP1-226ENST00000599040 TTC25Q96NG3 672 aa9.5□□□□□ -0.89
FARP1-226ENST00000599040 OLFM3Q96PB7 478 aa9.5□□□□□ -0.89
FARP1-226ENST00000599040 SCNM1Q9BWG6 230 aa9.5□□□□□ -0.89
FARP1-226ENST00000599040 PHACTR1Q9C0D0 580 aa9.5□□□□□ -0.89
FARP1-226ENST00000599040 RSPH9Q9H1X1 276 aaPredicted RBP9.5□□□□□ -0.89
FARP1-226ENST00000599040 GAREM1Q9H706 876 aa9.5□□□□□ -0.89
FARP1-226ENST00000599040 TMPRSS4Q9NRS4 437 aa9.5□□□□□ -0.89
FARP1-226ENST00000599040 RAB6BQ9NRW1 208 aa9.5□□□□□ -0.89
FARP1-226ENST00000599040 TMEM248Q9NWD8 314 aa9.5□□□□□ -0.89
FARP1-226ENST00000599040 KLHL8Q9P2G9 620 aaPredicted RBP9.5□□□□□ -0.89
FARP1-226ENST00000599040 EIF2B4Q9UI10 523 aaKnown RBP9.5□□□□□ -0.89
FARP1-226ENST00000599040 HPCAL4Q9UM19 191 aa9.5□□□□□ -0.89
FARP1-226ENST00000599040 APOBEC2Q9Y235 224 aaKnown RBP9.5□□□□□ -0.89
FARP1-226ENST00000599040 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.5□□□□□ -0.89
FARP1-226ENST00000599040 IGF2RP11717 2491 aa9.5□□□□□ -0.89
FARP1-226ENST00000599040 CFAP47Q6ZTR5 3102 aa9.49□□□□□ -0.89
FARP1-226ENST00000599040 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.49□□□□□ -0.89
FARP1-226ENST00000599040 A0A1B0GVM2 712 aa9.49□□□□□ -0.89
FARP1-226ENST00000599040 SPAARA0A1B0GVQ0 90 aa9.49□□□□□ -0.89
FARP1-226ENST00000599040 TCAF2A6NFQ2 919 aa9.49□□□□□ -0.89
FARP1-226ENST00000599040 LRRC72A6NJI9 287 aa9.49□□□□□ -0.89
FARP1-226ENST00000599040 RNF103O00237 685 aa9.49□□□□□ -0.89
FARP1-226ENST00000599040 EIF3HO15372 352 aaKnown RBP eCLIP9.49□□□□□ -0.892e-8■■□□□ 13.7
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms