RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 FREM2Q5SZK8 3169 aa17.36■□□□□ 0.37
SFSWAP-205ENST00000537164 POM121BA6NF01 834 aa17.36■□□□□ 0.37
SFSWAP-205ENST00000537164 NEMP1O14524 444 aa17.36■□□□□ 0.37
SFSWAP-205ENST00000537164 TRAFD1O14545 582 aaPredicted RBP17.36■□□□□ 0.37
SFSWAP-205ENST00000537164 RAD51BO15315 384 aa17.36■□□□□ 0.37
SFSWAP-205ENST00000537164 FTH1P19P0C7X4 201 aa17.36■□□□□ 0.37
SFSWAP-205ENST00000537164 SERPINA4P29622 427 aa17.36■□□□□ 0.37
SFSWAP-205ENST00000537164 SSR1P43307 286 aaKnown RBP17.36■□□□□ 0.37
SFSWAP-205ENST00000537164 HADHBP55084 474 aaKnown RBP17.36■□□□□ 0.37
SFSWAP-205ENST00000537164 CLDN2P57739 230 aa17.36■□□□□ 0.37
SFSWAP-205ENST00000537164 IL9RQ01113 521 aa17.36■□□□□ 0.37
SFSWAP-205ENST00000537164 FOXC1Q12948 553 aa17.36■□□□□ 0.37
SFSWAP-205ENST00000537164 AGERQ15109 404 aa17.36■□□□□ 0.37
SFSWAP-205ENST00000537164 RALGPS1Q5JS13 557 aa17.36■□□□□ 0.37
SFSWAP-205ENST00000537164 NCBP2-AS2Q69YL0 99 aa17.36■□□□□ 0.37
SFSWAP-205ENST00000537164 CAMK1DQ8IU85 385 aa17.36■□□□□ 0.37
SFSWAP-205ENST00000537164 SLC22A18ASQ8N1D0 253 aa17.36■□□□□ 0.37
SFSWAP-205ENST00000537164 ATPAF2Q8N5M1 289 aa17.36■□□□□ 0.37
SFSWAP-205ENST00000537164 KCTD6Q8NC69 237 aa17.36■□□□□ 0.37
SFSWAP-205ENST00000537164 ADAMTS14Q8WXS8 1223 aa17.36■□□□□ 0.37
SFSWAP-205ENST00000537164 FATE1Q969F0 183 aa17.36■□□□□ 0.37
SFSWAP-205ENST00000537164 NSMCE3Q96MG7 304 aa17.36■□□□□ 0.37
SFSWAP-205ENST00000537164 MYOCQ99972 504 aa17.36■□□□□ 0.37
SFSWAP-205ENST00000537164 APOBEC2Q9Y235 224 aaKnown RBP17.36■□□□□ 0.37
SFSWAP-205ENST00000537164 USP24Q9UPU5 2620 aa17.36■□□□□ 0.37
SFSWAP-205ENST00000537164 PTPRBP23467 1997 aa17.36■□□□□ 0.37
SFSWAP-205ENST00000537164 CFAP69A5D8W1 941 aa17.35■□□□□ 0.37
SFSWAP-205ENST00000537164 RIOK3O14730 519 aaKnown RBP17.35■□□□□ 0.37
SFSWAP-205ENST00000537164 TNFSF14O43557 240 aa17.35■□□□□ 0.37
SFSWAP-205ENST00000537164 TM7SF2O76062 418 aa17.35■□□□□ 0.37
SFSWAP-205ENST00000537164 FECHP22830 423 aa17.35■□□□□ 0.37
SFSWAP-205ENST00000537164 RABIFP47224 123 aa17.35■□□□□ 0.37
SFSWAP-205ENST00000537164 ZNF75DP51815 510 aa17.35■□□□□ 0.37
SFSWAP-205ENST00000537164 PFN3P60673 137 aa17.35■□□□□ 0.37
SFSWAP-205ENST00000537164 BCL2L1Q07817 233 aa17.35■□□□□ 0.37
SFSWAP-205ENST00000537164 GALNT2Q10471 571 aa17.35■□□□□ 0.37
SFSWAP-205ENST00000537164 BNIP3Q12983 259 aa17.35■□□□□ 0.37
SFSWAP-205ENST00000537164 MESDQ14696 234 aa17.35■□□□□ 0.37
SFSWAP-205ENST00000537164 LRRC73Q5JTD7 316 aa17.35■□□□□ 0.37
SFSWAP-205ENST00000537164 LRRC38Q5VT99 294 aa17.35■□□□□ 0.37
SFSWAP-205ENST00000537164 Q6ZSR6 202 aa17.35■□□□□ 0.37
SFSWAP-205ENST00000537164 SLCO6A1Q86UG4 719 aa17.35■□□□□ 0.37
SFSWAP-205ENST00000537164 ZSWIM9Q86XI8 627 aa17.35■□□□□ 0.37
SFSWAP-205ENST00000537164 GATAD2AQ86YP4 633 aa17.35■□□□□ 0.37
SFSWAP-205ENST00000537164 CCDC170Q8IYT3 715 aa17.35■□□□□ 0.37
SFSWAP-205ENST00000537164 TEX26Q8N6G2 289 aa17.35■□□□□ 0.37
SFSWAP-205ENST00000537164 CNTNAP3BQ96NU0 1288 aa17.35■□□□□ 0.37
SFSWAP-205ENST00000537164 MGME1Q9BQP7 344 aa17.35■□□□□ 0.37
SFSWAP-205ENST00000537164 SCNM1Q9BWG6 230 aa17.35■□□□□ 0.37
SFSWAP-205ENST00000537164 CALN1Q9BXU9 219 aa17.35■□□□□ 0.37
SFSWAP-205ENST00000537164 CNTNAP3Q9BZ76 1288 aa17.35■□□□□ 0.37
SFSWAP-205ENST00000537164 NEUROG3Q9Y4Z2 214 aa17.35■□□□□ 0.37
SFSWAP-205ENST00000537164 ZZEF1O43149 2961 aa17.35■□□□□ 0.37
SFSWAP-205ENST00000537164 TDRD6O60522 2096 aaKnown RBP17.35■□□□□ 0.37
SFSWAP-205ENST00000537164 SPTY2D1-AS1A0A0U1RR47 76 aa17.34■□□□□ 0.37
SFSWAP-205ENST00000537164 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.34■□□□□ 0.37
SFSWAP-205ENST00000537164 TOR1BO14657 336 aa17.34■□□□□ 0.37
SFSWAP-205ENST00000537164 FPGTO14772 594 aa17.34■□□□□ 0.37
SFSWAP-205ENST00000537164 HTRA2O43464 458 aaPredicted RBP17.34■□□□□ 0.37
SFSWAP-205ENST00000537164 MFSD11O43934 449 aa17.34■□□□□ 0.37
SFSWAP-205ENST00000537164 TOP3BO95985 862 aaKnown RBP17.34■□□□□ 0.37
SFSWAP-205ENST00000537164 ITGAVP06756 1048 aa17.34■□□□□ 0.37
SFSWAP-205ENST00000537164 ITIH2P19823 946 aa17.34■□□□□ 0.37
SFSWAP-205ENST00000537164 KDELR1P24390 212 aa17.34■□□□□ 0.37
SFSWAP-205ENST00000537164 MMP12P39900 470 aa17.34■□□□□ 0.37
SFSWAP-205ENST00000537164 GARSP41250 739 aaKnown RBP17.34■□□□□ 0.37
SFSWAP-205ENST00000537164 SLC1A1P43005 524 aa17.34■□□□□ 0.37
SFSWAP-205ENST00000537164 SCNN1BP51168 640 aa17.34■□□□□ 0.37
SFSWAP-205ENST00000537164 POLR2LP62875 67 aaKnown RBP17.34■□□□□ 0.37
SFSWAP-205ENST00000537164 ZNF235Q14590 738 aa17.34■□□□□ 0.37
SFSWAP-205ENST00000537164 GAS2L3Q86XJ1 694 aa17.34■□□□□ 0.37
SFSWAP-205ENST00000537164 PGBD5Q8N414 524 aa17.34■□□□□ 0.37
SFSWAP-205ENST00000537164 PQLC3Q8N755 202 aa17.34■□□□□ 0.37
SFSWAP-205ENST00000537164 DMXL2Q8TDJ6 3036 aa17.34■□□□□ 0.37
SFSWAP-205ENST00000537164 CXorf40AQ8TE69 158 aa17.34■□□□□ 0.37
SFSWAP-205ENST00000537164 TSGA13Q96PP4 275 aa17.34■□□□□ 0.37
SFSWAP-205ENST00000537164 NUDCD1Q96RS6 583 aa17.34■□□□□ 0.37
SFSWAP-205ENST00000537164 PCDH12Q9NPG4 1184 aa17.34■□□□□ 0.37
SFSWAP-205ENST00000537164 A0A1W2PQ67 120 aa17.33■□□□□ 0.36
SFSWAP-205ENST00000537164 C3orf70A6NLC5 250 aaPredicted RBP17.33■□□□□ 0.36
SFSWAP-205ENST00000537164 HYAL3O43820 417 aaPredicted RBP17.33■□□□□ 0.36
SFSWAP-205ENST00000537164 MMP20O60882 483 aa17.33■□□□□ 0.36
SFSWAP-205ENST00000537164 SOCS5O75159 536 aa17.33■□□□□ 0.36
SFSWAP-205ENST00000537164 ATXN1LP0C7T5 689 aaKnown RBP17.33■□□□□ 0.36
SFSWAP-205ENST00000537164 XPAP23025 273 aaPredicted RBP17.33■□□□□ 0.36
SFSWAP-205ENST00000537164 FZD2Q14332 565 aa17.33■□□□□ 0.36
SFSWAP-205ENST00000537164 MARC1Q5VT66 337 aa17.33■□□□□ 0.36
SFSWAP-205ENST00000537164 ALG1LQ6GMV1 187 aa17.33■□□□□ 0.36
SFSWAP-205ENST00000537164 ERAP2Q6P179 960 aa17.33■□□□□ 0.36
SFSWAP-205ENST00000537164 BBS5Q8N3I7 341 aa17.33■□□□□ 0.36
SFSWAP-205ENST00000537164 TP53I13Q8NBR0 393 aaPredicted RBP17.33■□□□□ 0.36
SFSWAP-205ENST00000537164 RAPGEF5Q92565 580 aa17.33■□□□□ 0.36
SFSWAP-205ENST00000537164 MAML1Q92585 1016 aa17.33■□□□□ 0.36
SFSWAP-205ENST00000537164 RNF157Q96PX1 679 aa17.33■□□□□ 0.36
SFSWAP-205ENST00000537164 PANX2Q96RD6 677 aa17.33■□□□□ 0.36
SFSWAP-205ENST00000537164 C1QTNF7Q9BXJ2 289 aa17.33■□□□□ 0.36
SFSWAP-205ENST00000537164 TMEM121BQ9BXQ6 578 aaPredicted RBP17.33■□□□□ 0.36
SFSWAP-205ENST00000537164 AMACRQ9UHK6 382 aa17.33■□□□□ 0.36
SFSWAP-205ENST00000537164 ATP8A1Q9Y2Q0 1164 aa17.33■□□□□ 0.36
SFSWAP-205ENST00000537164 PLXNB3Q9ULL4 1909 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms