RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 MANEALQ5VSG8 457 aa11.67□□□□□ -0.54
USP35-207ENST00000530546 BEND5Q7L4P6 421 aa11.67□□□□□ -0.54
USP35-207ENST00000530546 CIR1Q86X95 450 aaPredicted RBP11.67□□□□□ -0.54
USP35-207ENST00000530546 SLC25A41Q8N5S1 370 aa11.67□□□□□ -0.54
USP35-207ENST00000530546 ACMSDQ8TDX5 336 aa11.67□□□□□ -0.54
USP35-207ENST00000530546 GIPC2Q8TF65 315 aa11.67□□□□□ -0.54
USP35-207ENST00000530546 PYDC1Q8WXC3 89 aa11.67□□□□□ -0.54
USP35-207ENST00000530546 DPF3Q92784 378 aa11.67□□□□□ -0.54
USP35-207ENST00000530546 HSPBAP1Q96EW2 488 aa11.67□□□□□ -0.54
USP35-207ENST00000530546 KLHL5Q96PQ7 755 aa11.67□□□□□ -0.54
USP35-207ENST00000530546 PLGRKTQ9HBL7 147 aa11.67□□□□□ -0.54
USP35-207ENST00000530546 DCDC2Q9UHG0 476 aa11.67□□□□□ -0.54
USP35-207ENST00000530546 IPO11Q9UI26 975 aaKnown RBP11.67□□□□□ -0.54
USP35-207ENST00000530546 ADAM28Q9UKQ2 775 aa11.67□□□□□ -0.54
USP35-207ENST00000530546 SLC39A10Q9ULF5 831 aa11.67□□□□□ -0.54
USP35-207ENST00000530546 LRFN2Q9ULH4 789 aa11.67□□□□□ -0.54
USP35-207ENST00000530546 RAB26Q9ULW5 256 aa11.67□□□□□ -0.54
USP35-207ENST00000530546 FAF1Q9UNN5 650 aaPredicted RBP11.67□□□□□ -0.54
USP35-207ENST00000530546 SCML2Q9UQR0 700 aa11.67□□□□□ -0.54
USP35-207ENST00000530546 THSD7BQ9C0I4 1608 aa11.67□□□□□ -0.54
USP35-207ENST00000530546 TTC24A2A3L6 582 aaPredicted RBP11.67□□□□□ -0.54
USP35-207ENST00000530546 KCNU1A8MYU2 1149 aa11.67□□□□□ -0.54
USP35-207ENST00000530546 ENPP3O14638 875 aa11.67□□□□□ -0.54
USP35-207ENST00000530546 MATN3O15232 486 aa11.67□□□□□ -0.54
USP35-207ENST00000530546 GSRP00390 522 aa11.67□□□□□ -0.54
USP35-207ENST00000530546 ALDH2P05091 517 aa11.67□□□□□ -0.54
USP35-207ENST00000530546 MLLT6P55198 1093 aaPredicted RBP11.67□□□□□ -0.54
USP35-207ENST00000530546 KDSRQ06136 332 aa11.67□□□□□ -0.54
USP35-207ENST00000530546 TAF10Q12962 218 aa11.67□□□□□ -0.54
USP35-207ENST00000530546 TRIP10Q15642 601 aa11.67□□□□□ -0.54
USP35-207ENST00000530546 C10orf120Q5SQS8 335 aa11.67□□□□□ -0.54
USP35-207ENST00000530546 SLC15A3Q8IY34 581 aa11.67□□□□□ -0.54
USP35-207ENST00000530546 RTL3Q8N8U3 475 aaKnown RBP11.67□□□□□ -0.54
USP35-207ENST00000530546 PABPC5Q96DU9 382 aaKnown RBP11.67□□□□□ -0.54
USP35-207ENST00000530546 C7orf26Q96N11 449 aa11.67□□□□□ -0.54
USP35-207ENST00000530546 FSD1LQ9BXM9 530 aa11.67□□□□□ -0.54
USP35-207ENST00000530546 ACSS2Q9NR19 701 aa11.67□□□□□ -0.54
USP35-207ENST00000530546 TMEM161AQ9NX61 479 aa11.67□□□□□ -0.54
USP35-207ENST00000530546 AAR2Q9Y312 384 aaKnown RBP11.67□□□□□ -0.54
USP35-207ENST00000530546 A0A096LPK6 155 aa11.66□□□□□ -0.54
USP35-207ENST00000530546 HTR3EA5X5Y0 456 aa11.66□□□□□ -0.54
USP35-207ENST00000530546 BOLA2-SMG1P6H3BVE0 249 aa11.66□□□□□ -0.54
USP35-207ENST00000530546 ARVCFO00192 962 aa11.66□□□□□ -0.54
USP35-207ENST00000530546 MATN2O00339 956 aa11.66□□□□□ -0.54
USP35-207ENST00000530546 SELPP16109 830 aa11.66□□□□□ -0.54
USP35-207ENST00000530546 YWHAQP27348 245 aa11.66□□□□□ -0.54
USP35-207ENST00000530546 AVPR1AP37288 418 aa11.66□□□□□ -0.54
USP35-207ENST00000530546 SLC11A1P49279 550 aa11.66□□□□□ -0.54
USP35-207ENST00000530546 LIMK2P53671 638 aa11.66□□□□□ -0.54
USP35-207ENST00000530546 ALFQ53S48 1182 aa11.66□□□□□ -0.54
USP35-207ENST00000530546 OGFRL1Q5TC84 451 aaPredicted RBP11.66□□□□□ -0.54
USP35-207ENST00000530546 RAP1GAP2Q684P5 730 aa11.66□□□□□ -0.54
USP35-207ENST00000530546 RSPO2Q6UXX9 243 aaPredicted RBP11.66□□□□□ -0.54
USP35-207ENST00000530546 RNF111Q6ZNA4 994 aa11.66□□□□□ -0.54
USP35-207ENST00000530546 HHIPL1Q96JK4 782 aa11.66□□□□□ -0.54
USP35-207ENST00000530546 TSGA13Q96PP4 275 aa11.66□□□□□ -0.54
USP35-207ENST00000530546 CCDC106Q9BWC9 280 aa11.66□□□□□ -0.54
USP35-207ENST00000530546 GRIP2Q9C0E4 1043 aa11.66□□□□□ -0.54
USP35-207ENST00000530546 CRISPLD1Q9H336 500 aa11.66□□□□□ -0.54
USP35-207ENST00000530546 FBXO44Q9H4M3 255 aa11.66□□□□□ -0.54
USP35-207ENST00000530546 TUBA8Q9NY65 449 aaPredicted RBP11.66□□□□□ -0.54
USP35-207ENST00000530546 DNAJC16Q9Y2G8 782 aa11.66□□□□□ -0.54
USP35-207ENST00000530546 HBS1LQ9Y450 684 aaKnown RBP11.66□□□□□ -0.54
USP35-207ENST00000530546 SLC12A8A0AV02 714 aa11.66□□□□□ -0.54
USP35-207ENST00000530546 J3KR12 359 aa11.66□□□□□ -0.54
USP35-207ENST00000530546 ANXA9O76027 345 aa11.66□□□□□ -0.54
USP35-207ENST00000530546 VAPBO95292 243 aa11.66□□□□□ -0.54
USP35-207ENST00000530546 PROCP04070 461 aa11.66□□□□□ -0.54
USP35-207ENST00000530546 FGF3P11487 239 aaPredicted RBP11.66□□□□□ -0.54
USP35-207ENST00000530546 PCSK6P29122 969 aa11.66□□□□□ -0.54
USP35-207ENST00000530546 CPOXP36551 454 aa11.66□□□□□ -0.54
USP35-207ENST00000530546 APOFQ13790 326 aa11.66□□□□□ -0.54
USP35-207ENST00000530546 PCLAFQ15004 111 aa11.66□□□□□ -0.54
USP35-207ENST00000530546 TLR1Q15399 786 aa11.66□□□□□ -0.54
USP35-207ENST00000530546 HSF5Q4G112 596 aaPredicted RBP11.66□□□□□ -0.54
USP35-207ENST00000530546 MBLAC2Q68D91 279 aa11.66□□□□□ -0.54
USP35-207ENST00000530546 ZNF280DQ6N043 979 aa11.66□□□□□ -0.54
USP35-207ENST00000530546 ESRP1Q6NXG1 681 aaKnown RBP11.66□□□□□ -0.54
USP35-207ENST00000530546 LINC00523Q86TU6 105 aa11.66□□□□□ -0.54
USP35-207ENST00000530546 LZTR1Q8N653 840 aa11.66□□□□□ -0.54
USP35-207ENST00000530546 SLC26A7Q8TE54 656 aa11.66□□□□□ -0.54
USP35-207ENST00000530546 C8orf48Q96LL4 319 aa11.66□□□□□ -0.54
USP35-207ENST00000530546 IL12RB2Q99665 862 aa11.66□□□□□ -0.54
USP35-207ENST00000530546 EBF4Q9BQW3 602 aa11.66□□□□□ -0.54
USP35-207ENST00000530546 NT5MQ9NPB1 228 aa11.66□□□□□ -0.54
USP35-207ENST00000530546 SLC2A6Q9UGQ3 507 aa11.66□□□□□ -0.54
USP35-207ENST00000530546 TLR6Q9Y2C9 796 aa11.66□□□□□ -0.54
USP35-207ENST00000530546 TMEM98Q9Y2Y6 226 aa11.66□□□□□ -0.54
USP35-207ENST00000530546 DTNAQ9Y4J8 743 aa11.66□□□□□ -0.54
USP35-207ENST00000530546 MAGEB16A2A368 324 aa11.65□□□□□ -0.54
USP35-207ENST00000530546 TMEM189-UBE2V1I3L0A0 370 aa11.65□□□□□ -0.54
USP35-207ENST00000530546 PHGDHO43175 533 aaKnown RBP11.65□□□□□ -0.54
USP35-207ENST00000530546 PRKCGP05129 697 aa11.65□□□□□ -0.54
USP35-207ENST00000530546 CDH2P19022 906 aaPredicted RBP11.65□□□□□ -0.54
USP35-207ENST00000530546 FUT4P22083 530 aa11.65□□□□□ -0.54
USP35-207ENST00000530546 PMLP29590 882 aa11.65□□□□□ -0.54
USP35-207ENST00000530546 SLC1A6P48664 564 aa11.65□□□□□ -0.54
USP35-207ENST00000530546 ALDH18A1P54886 795 aaKnown RBP11.65□□□□□ -0.54
USP35-207ENST00000530546 DUSP4Q13115 394 aa11.65□□□□□ -0.54
USP35-207ENST00000530546 CTBP1Q13363 440 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms