RNA–Protein interactions for RNA: ENST00000526971.1

PKP3-204, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 532 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-204ENST00000526971 TBC1D3CQ6IPX1 549 aa19.32■□□□□ 0.68
PKP3-204ENST00000526971 RAD9BQ6WBX8 426 aa19.32■□□□□ 0.68
PKP3-204ENST00000526971 KANSL1Q7Z3B3 1105 aa19.32■□□□□ 0.68
PKP3-204ENST00000526971 SPATS2Q86XZ4 545 aaKnown RBP19.32■□□□□ 0.68
PKP3-204ENST00000526971 TBC1D3Q8IZP1 549 aaPredicted RBP19.32■□□□□ 0.68
PKP3-204ENST00000526971 SERAC1Q96JX3 654 aa19.32■□□□□ 0.68
PKP3-204ENST00000526971 BAG1Q99933 345 aaPredicted RBP19.32■□□□□ 0.68
PKP3-204ENST00000526971 ZNF670Q9BS34 389 aa19.32■□□□□ 0.68
PKP3-204ENST00000526971 SP110Q9HB58 689 aa19.32■□□□□ 0.68
PKP3-204ENST00000526971 GDF3Q9NR23 364 aa19.32■□□□□ 0.68
PKP3-204ENST00000526971 TFR2Q9UP52 801 aa19.32■□□□□ 0.68
PKP3-204ENST00000526971 DOCK4Q8N1I0 1966 aa19.32■□□□□ 0.68
PKP3-204ENST00000526971 A0A0A6YYK5 440 aaPredicted RBP19.31■□□□□ 0.68
PKP3-204ENST00000526971 LATO43561 262 aa19.31■□□□□ 0.68
PKP3-204ENST00000526971 PALMO75781 387 aa19.31■□□□□ 0.68
PKP3-204ENST00000526971 SERPINB6P35237 376 aa19.31■□□□□ 0.68
PKP3-204ENST00000526971 RFTN1Q14699 578 aaPredicted RBP19.31■□□□□ 0.68
PKP3-204ENST00000526971 ANKRD20A8PQ5CZ79 823 aa19.31■□□□□ 0.68
PKP3-204ENST00000526971 ZFYVE27Q5T4F4 411 aa19.31■□□□□ 0.68
PKP3-204ENST00000526971 HES3Q5TGS1 186 aa19.31■□□□□ 0.68
PKP3-204ENST00000526971 LRRC38Q5VT99 294 aa19.31■□□□□ 0.68
PKP3-204ENST00000526971 FBXL19Q6PCT2 694 aa19.31■□□□□ 0.68
PKP3-204ENST00000526971 PCDH19Q8TAB3 1148 aa19.31■□□□□ 0.68
PKP3-204ENST00000526971 RAPGEF5Q92565 580 aa19.31■□□□□ 0.68
PKP3-204ENST00000526971 FAF2Q96CS3 445 aa19.31■□□□□ 0.68
PKP3-204ENST00000526971 NXPE2Q96DL1 559 aa19.31■□□□□ 0.68
PKP3-204ENST00000526971 OSBPL1AQ9BXW6 950 aa19.31■□□□□ 0.68
PKP3-204ENST00000526971 PREBQ9HCU5 417 aa19.31■□□□□ 0.68
PKP3-204ENST00000526971 TLR4O00206 839 aa19.3■□□□□ 0.68
PKP3-204ENST00000526971 IPO7O95373 1038 aaKnown RBP19.3■□□□□ 0.68
PKP3-204ENST00000526971 PRB1P04280 392 aa19.3■□□□□ 0.68
PKP3-204ENST00000526971 JUPP14923 745 aa19.3■□□□□ 0.68
PKP3-204ENST00000526971 COMTP21964 271 aa19.3■□□□□ 0.68
PKP3-204ENST00000526971 KDELR1P24390 212 aa19.3■□□□□ 0.68
PKP3-204ENST00000526971 ABCG1P45844 678 aa19.3■□□□□ 0.68
PKP3-204ENST00000526971 NEK3P51956 506 aa19.3■□□□□ 0.68
PKP3-204ENST00000526971 RAD51Q06609 339 aa19.3■□□□□ 0.68
PKP3-204ENST00000526971 TARDBPQ13148 414 aaKnown RBP eCLIP19.3■□□□□ 0.68
PKP3-204ENST00000526971 ZNF805Q5CZA5 627 aa19.3■□□□□ 0.68
PKP3-204ENST00000526971 GDPD4Q6W3E5 623 aa19.3■□□□□ 0.68
PKP3-204ENST00000526971 TMEM139Q8IV31 216 aa19.3■□□□□ 0.68
PKP3-204ENST00000526971 ZNF599Q96NL3 588 aa19.3■□□□□ 0.68
PKP3-204ENST00000526971 REXO2Q9Y3B8 237 aaKnown RBP19.3■□□□□ 0.68
PKP3-204ENST00000526971 MGAQ8IWI9 3026 aa19.3■□□□□ 0.68
PKP3-204ENST00000526971 C16orf96A6NNT2 1141 aa19.29■□□□□ 0.68
PKP3-204ENST00000526971 INSIG1O15503 277 aa19.29■□□□□ 0.68
PKP3-204ENST00000526971 BUB1BO60566 1050 aaPredicted RBP19.29■□□□□ 0.68
PKP3-204ENST00000526971 UGT2B4P06133 528 aa19.29■□□□□ 0.68
PKP3-204ENST00000526971 ADRB3P13945 408 aa19.29■□□□□ 0.68
PKP3-204ENST00000526971 CSNK1DP48730 415 aa19.29■□□□□ 0.68
PKP3-204ENST00000526971 SEMG2Q02383 582 aa19.29■□□□□ 0.68
PKP3-204ENST00000526971 PAFAH1B3Q15102 231 aaKnown RBP19.29■□□□□ 0.68
PKP3-204ENST00000526971 TMCO4Q5TGY1 634 aa19.29■□□□□ 0.68
PKP3-204ENST00000526971 NCBP2-AS2Q69YL0 99 aa19.29■□□□□ 0.68
PKP3-204ENST00000526971 NAPEPLDQ6IQ20 393 aa19.29■□□□□ 0.68
PKP3-204ENST00000526971 NEK5Q6P3R8 708 aa19.29■□□□□ 0.68
PKP3-204ENST00000526971 PARS2Q7L3T8 475 aaKnown RBP19.29■□□□□ 0.68
PKP3-204ENST00000526971 TRIM69Q86WT6 500 aa19.29■□□□□ 0.68
PKP3-204ENST00000526971 RHOT1Q8IXI2 618 aa19.29■□□□□ 0.68
PKP3-204ENST00000526971 SKA1Q96BD8 255 aa19.29■□□□□ 0.68
PKP3-204ENST00000526971 EXOC2Q96KP1 924 aa19.29■□□□□ 0.68
PKP3-204ENST00000526971 CPEB1Q9BZB8 566 aaKnown RBP19.29■□□□□ 0.68
PKP3-204ENST00000526971 HYOU1Q9Y4L1 999 aa19.29■□□□□ 0.68
PKP3-204ENST00000526971 CFAP46Q8IYW2 2715 aa19.29■□□□□ 0.68
PKP3-204ENST00000526971 LRRD1A4D1F6 860 aa19.28■□□□□ 0.68
PKP3-204ENST00000526971 RCCD1A6NED2 376 aa19.28■□□□□ 0.68
PKP3-204ENST00000526971 GOLGA6L6A8MZA4 724 aa19.28■□□□□ 0.68
PKP3-204ENST00000526971 ZNF487B1APH4 448 aa19.28■□□□□ 0.68
PKP3-204ENST00000526971 YKT6O15498 198 aa19.28■□□□□ 0.68
PKP3-204ENST00000526971 SPOPO43791 374 aa19.28■□□□□ 0.68
PKP3-204ENST00000526971 MAFKO60675 156 aa19.28■□□□□ 0.68
PKP3-204ENST00000526971 RNGTTO60942 597 aaKnown RBP19.28■□□□□ 0.68
PKP3-204ENST00000526971 PEX11BO96011 259 aa19.28■□□□□ 0.68
PKP3-204ENST00000526971 C1SP09871 688 aa19.28■□□□□ 0.68
PKP3-204ENST00000526971 MAT2AP31153 395 aaKnown RBP19.28■□□□□ 0.68
PKP3-204ENST00000526971 HNF1BP35680 557 aa19.28■□□□□ 0.68
PKP3-204ENST00000526971 EIF2S3P41091 472 aaKnown RBP19.28■□□□□ 0.68
PKP3-204ENST00000526971 RXRGP48443 463 aa19.28■□□□□ 0.68
PKP3-204ENST00000526971 LBRQ14739 615 aaKnown RBP19.28■□□□□ 0.68
PKP3-204ENST00000526971 PRPF39Q86UA1 669 aaKnown RBP19.28■□□□□ 0.68
PKP3-204ENST00000526971 LRRC49Q8IUZ0 686 aa19.28■□□□□ 0.68
PKP3-204ENST00000526971 ATPAF2Q8N5M1 289 aa19.28■□□□□ 0.68
PKP3-204ENST00000526971 PQLC3Q8N755 202 aa19.28■□□□□ 0.68
PKP3-204ENST00000526971 TSEN2Q8NCE0 465 aaKnown RBP19.28■□□□□ 0.68
PKP3-204ENST00000526971 KLHL32Q96NJ5 620 aa19.28■□□□□ 0.68
PKP3-204ENST00000526971 RNF157Q96PX1 679 aa19.28■□□□□ 0.68
PKP3-204ENST00000526971 PSKH2Q96QS6 385 aa19.28■□□□□ 0.68
PKP3-204ENST00000526971 CINPQ9BW66 212 aaPredicted RBP19.28■□□□□ 0.68
PKP3-204ENST00000526971 CAAP1Q9H8G2 361 aa19.28■□□□□ 0.68
PKP3-204ENST00000526971 SEPT3Q9UH03 358 aa19.28■□□□□ 0.68
PKP3-204ENST00000526971 CA5BQ9Y2D0 317 aa19.28■□□□□ 0.68
PKP3-204ENST00000526971 RAI2Q9Y5P3 530 aa19.28■□□□□ 0.68
PKP3-204ENST00000526971 ALG6Q9Y672 507 aa19.28■□□□□ 0.68
PKP3-204ENST00000526971 C3orf70A6NLC5 250 aaPredicted RBP19.27■□□□□ 0.68
PKP3-204ENST00000526971 AP1G1O43747 822 aa19.27■□□□□ 0.68
PKP3-204ENST00000526971 MFSD11O43934 449 aa19.27■□□□□ 0.68
PKP3-204ENST00000526971 C1QL1O75973 258 aa19.27■□□□□ 0.68
PKP3-204ENST00000526971 ZIC2O95409 532 aaPredicted RBP19.27■□□□□ 0.68
PKP3-204ENST00000526971 NUDT1P36639 197 aa19.27■□□□□ 0.68
PKP3-204ENST00000526971 RGRP47804 291 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms