RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 SLC9C1Q4G0N8 1177 aa4.68□□□□□ -1.66
HMGB1P16-201ENST00000447155 CEP78Q5JTW2 689 aa4.68□□□□□ -1.66
HMGB1P16-201ENST00000447155 WDR78Q5VTH9 848 aa4.68□□□□□ -1.66
HMGB1P16-201ENST00000447155 ISM2Q6H9L7 571 aa4.68□□□□□ -1.66
HMGB1P16-201ENST00000447155 ZSCAN25Q6NSZ9 544 aa4.68□□□□□ -1.66
HMGB1P16-201ENST00000447155 GBP6Q6ZN66 633 aa4.68□□□□□ -1.66
HMGB1P16-201ENST00000447155 FAM57BQ71RH2 274 aa4.68□□□□□ -1.66
HMGB1P16-201ENST00000447155 PCGF5Q86SE9 256 aa4.68□□□□□ -1.66
HMGB1P16-201ENST00000447155 PRIMA1Q86XR5 153 aa4.68□□□□□ -1.66
HMGB1P16-201ENST00000447155 ADGRF4Q8IZF3 695 aa4.68□□□□□ -1.66
HMGB1P16-201ENST00000447155 GHDCQ8N2G8 530 aa4.68□□□□□ -1.66
HMGB1P16-201ENST00000447155 C17orf53Q8N3J3 647 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P16-201ENST00000447155 CPXM2Q8N436 756 aa4.68□□□□□ -1.66
HMGB1P16-201ENST00000447155 TMEM217Q8N7C4 229 aa4.68□□□□□ -1.66
HMGB1P16-201ENST00000447155 SPC24Q8NBT2 197 aa4.68□□□□□ -1.66
HMGB1P16-201ENST00000447155 ADAMTS15Q8TE58 950 aa4.68□□□□□ -1.66
HMGB1P16-201ENST00000447155 DPF1Q92782 380 aa4.68□□□□□ -1.66
HMGB1P16-201ENST00000447155 KAT2AQ92830 837 aa4.68□□□□□ -1.66
HMGB1P16-201ENST00000447155 GTF3C6Q969F1 213 aa4.68□□□□□ -1.66
HMGB1P16-201ENST00000447155 FAM210AQ96ND0 272 aa4.68□□□□□ -1.66
HMGB1P16-201ENST00000447155 FLRT1Q9NZU1 646 aa4.68□□□□□ -1.66
HMGB1P16-201ENST00000447155 KCND2Q9NZV8 630 aa4.68□□□□□ -1.66
HMGB1P16-201ENST00000447155 CLIP2Q9UDT6 1046 aa4.68□□□□□ -1.66
HMGB1P16-201ENST00000447155 ZNF215Q9UL58 517 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P16-201ENST00000447155 ICKQ9UPZ9 632 aa4.68□□□□□ -1.66
HMGB1P16-201ENST00000447155 NSD3Q9BZ95 1437 aa4.68□□□□□ -1.66
HMGB1P16-201ENST00000447155 ARHGEF28Q8N1W1 1705 aaKnown RBP4.68□□□□□ -1.66
HMGB1P16-201ENST00000447155 CRYBG1Q9Y4K1 1723 aa4.68□□□□□ -1.66
HMGB1P16-201ENST00000447155 PPLO60437 1756 aa4.68□□□□□ -1.66
HMGB1P16-201ENST00000447155 ATP7AQ04656 1500 aa4.67□□□□□ -1.66
HMGB1P16-201ENST00000447155 RTL1A6NKG5 1358 aa4.67□□□□□ -1.66
HMGB1P16-201ENST00000447155 WIPF3A6NGB9 483 aa4.67□□□□□ -1.66
HMGB1P16-201ENST00000447155 TTC36A6NLP5 189 aa4.67□□□□□ -1.66
HMGB1P16-201ENST00000447155 F8W810 466 aa4.67□□□□□ -1.66
HMGB1P16-201ENST00000447155 PPP6CO00743 305 aa4.67□□□□□ -1.66
HMGB1P16-201ENST00000447155 CEP104O60308 925 aa4.67□□□□□ -1.66
HMGB1P16-201ENST00000447155 HMMRO75330 724 aa4.67□□□□□ -1.66
HMGB1P16-201ENST00000447155 RPS6KA5O75582 802 aa4.67□□□□□ -1.66
HMGB1P16-201ENST00000447155 NEURL1O76050 574 aa4.67□□□□□ -1.66
HMGB1P16-201ENST00000447155 CBX6O95503 412 aa4.67□□□□□ -1.66
HMGB1P16-201ENST00000447155 SERPINC1P01008 464 aa4.67□□□□□ -1.66
HMGB1P16-201ENST00000447155 TSPY4P0CV99 314 aa4.67□□□□□ -1.66
HMGB1P16-201ENST00000447155 TSPY10P0CW01 314 aa4.67□□□□□ -1.66
HMGB1P16-201ENST00000447155 COX7A2P14406 83 aa4.67□□□□□ -1.66
HMGB1P16-201ENST00000447155 CASTP20810 708 aaKnown RBP4.67□□□□□ -1.66
HMGB1P16-201ENST00000447155 EPHA8P29322 1005 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P16-201ENST00000447155 NF2P35240 595 aa4.67□□□□□ -1.66
HMGB1P16-201ENST00000447155 PTPN9P43378 593 aa4.67□□□□□ -1.66
HMGB1P16-201ENST00000447155 ZNF75DP51815 510 aa4.67□□□□□ -1.66
HMGB1P16-201ENST00000447155 UFM1P61960 85 aa4.67□□□□□ -1.66
HMGB1P16-201ENST00000447155 RPS13P62277 151 aaKnown RBP4.67□□□□□ -1.66
HMGB1P16-201ENST00000447155 EFNB1P98172 346 aa4.67□□□□□ -1.66
HMGB1P16-201ENST00000447155 CUL4AQ13619 759 aa4.67□□□□□ -1.66
HMGB1P16-201ENST00000447155 NEDD9Q14511 834 aa4.67□□□□□ -1.66
HMGB1P16-201ENST00000447155 ZKSCAN8Q15776 578 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P16-201ENST00000447155 KRTAP15-1Q3LI76 137 aa4.67□□□□□ -1.66
HMGB1P16-201ENST00000447155 UBAP2Q5T6F2 1119 aaKnown RBP4.67□□□□□ -1.66
HMGB1P16-201ENST00000447155 SARM1Q6SZW1 724 aa4.67□□□□□ -1.66
HMGB1P16-201ENST00000447155 C17orf99Q6UX52 265 aa4.67□□□□□ -1.66
HMGB1P16-201ENST00000447155 C4orf50Q6ZRC1 276 aa4.67□□□□□ -1.66
HMGB1P16-201ENST00000447155 TADA2BQ86TJ2 420 aa4.67□□□□□ -1.66
HMGB1P16-201ENST00000447155 IGFN1Q86VF2 1251 aa4.67□□□□□ -1.66
HMGB1P16-201ENST00000447155 CCDC25Q86WR0 208 aa4.67□□□□□ -1.66
HMGB1P16-201ENST00000447155 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.67□□□□□ -1.66
HMGB1P16-201ENST00000447155 CEP112Q8N8E3 955 aa4.67□□□□□ -1.66
HMGB1P16-201ENST00000447155 HDAC7Q8WUI4 952 aa4.67□□□□□ -1.66
HMGB1P16-201ENST00000447155 FAR1Q8WVX9 515 aa4.67□□□□□ -1.66
HMGB1P16-201ENST00000447155 CENPIQ92674 756 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P16-201ENST00000447155 PAIP2Q9BPZ3 127 aaKnown RBP4.67□□□□□ -1.66
HMGB1P16-201ENST00000447155 SH2D3AQ9BRG2 576 aa4.67□□□□□ -1.66
HMGB1P16-201ENST00000447155 SCNM1Q9BWG6 230 aa4.67□□□□□ -1.66
HMGB1P16-201ENST00000447155 NAT10Q9H0A0 1025 aaKnown RBP4.67□□□□□ -1.66
HMGB1P16-201ENST00000447155 SLC25A18Q9H1K4 315 aa4.67□□□□□ -1.66
HMGB1P16-201ENST00000447155 TTYH1Q9H313 450 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P16-201ENST00000447155 TMPRSS5Q9H3S3 457 aa4.67□□□□□ -1.66
HMGB1P16-201ENST00000447155 HIPK3Q9H422 1215 aa4.67□□□□□ -1.66
HMGB1P16-201ENST00000447155 ACTR5Q9H9F9 607 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P16-201ENST00000447155 ENTPD7Q9NQZ7 604 aa4.67□□□□□ -1.66
HMGB1P16-201ENST00000447155 PAPOLBQ9NRJ5 636 aaKnown RBP4.67□□□□□ -1.66
HMGB1P16-201ENST00000447155 ZBTB40Q9NUA8 1239 aa4.67□□□□□ -1.66
HMGB1P16-201ENST00000447155 TERF2IPQ9NYB0 399 aa4.67□□□□□ -1.66
HMGB1P16-201ENST00000447155 MAP3K20Q9NYL2 800 aaKnown RBP4.67□□□□□ -1.66
HMGB1P16-201ENST00000447155 TAS2R10Q9NYW0 307 aa4.67□□□□□ -1.66
HMGB1P16-201ENST00000447155 GRHL1Q9NZI5 618 aa4.67□□□□□ -1.66
HMGB1P16-201ENST00000447155 IL1RAPL1Q9NZN1 696 aa4.67□□□□□ -1.66
HMGB1P16-201ENST00000447155 KLHL13Q9P2N7 655 aa4.67□□□□□ -1.66
HMGB1P16-201ENST00000447155 ORC3Q9UBD5 711 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P16-201ENST00000447155 SARDHQ9UL12 918 aa4.67□□□□□ -1.66
HMGB1P16-201ENST00000447155 CAMK2AQ9UQM7 478 aa4.67□□□□□ -1.66
HMGB1P16-201ENST00000447155 NAALADL1Q9UQQ1 740 aa4.67□□□□□ -1.66
HMGB1P16-201ENST00000447155 DLG5Q8TDM6 1919 aa4.67□□□□□ -1.66
HMGB1P16-201ENST00000447155 MAGI1Q96QZ7 1491 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P16-201ENST00000447155 NRXN1Q9ULB1 1477 aa4.67□□□□□ -1.66
HMGB1P16-201ENST00000447155 SETD1BQ9UPS6 1966 aaKnown RBP4.67□□□□□ -1.66
HMGB1P16-201ENST00000447155 NPHP3Q7Z494 1330 aa4.67□□□□□ -1.66
HMGB1P16-201ENST00000447155 FAM208AQ9UK61 1670 aaKnown RBP4.67□□□□□ -1.66
HMGB1P16-201ENST00000447155 ABCC1P33527 1531 aa4.67□□□□□ -1.66
HMGB1P16-201ENST00000447155 TDRD9Q8NDG6 1382 aaKnown RBP4.66□□□□□ -1.66
HMGB1P16-201ENST00000447155 MST1RQ04912 1400 aa4.66□□□□□ -1.66
HMGB1P16-201ENST00000447155 A0A087WUV0 522 aaPredicted RBP4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms