RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 CCDC126Q96EE4 140 aa10.51□□□□□ -0.73
CPNE1-218ENST00000439806 CEP295NLQ96MC4 621 aa10.51□□□□□ -0.73
CPNE1-218ENST00000439806 ZNF599Q96NL3 588 aa10.51□□□□□ -0.73
CPNE1-218ENST00000439806 NDNQ99608 321 aa10.51□□□□□ -0.73
CPNE1-218ENST00000439806 CCDC28BQ9BUN5 200 aa10.51□□□□□ -0.73
CPNE1-218ENST00000439806 TTLL2Q9BWV7 592 aa10.51□□□□□ -0.73
CPNE1-218ENST00000439806 MAGEH1Q9H213 219 aa10.51□□□□□ -0.73
CPNE1-218ENST00000439806 MFSD1Q9H3U5 465 aa10.51□□□□□ -0.73
CPNE1-218ENST00000439806 POMKQ9H5K3 350 aa10.51□□□□□ -0.73
CPNE1-218ENST00000439806 ZNF212Q9UDV6 495 aa10.51□□□□□ -0.73
CPNE1-218ENST00000439806 CDYLQ9Y232 598 aa10.51□□□□□ -0.73
CPNE1-218ENST00000439806 GBF1Q92538 1859 aa10.51□□□□□ -0.73
CPNE1-218ENST00000439806 TTC24A2A3L6 582 aaPredicted RBP10.5□□□□□ -0.73
CPNE1-218ENST00000439806 TARM1B6A8C7 271 aa10.5□□□□□ -0.73
CPNE1-218ENST00000439806 F8W8V4 182 aa10.5□□□□□ -0.73
CPNE1-218ENST00000439806 PITPNM1O00562 1244 aa10.5□□□□□ -0.73
CPNE1-218ENST00000439806 FKTNO75072 461 aa10.5□□□□□ -0.73
CPNE1-218ENST00000439806 SNUPNO95149 360 aaKnown RBP10.5□□□□□ -0.73
CPNE1-218ENST00000439806 RBP1P09455 135 aa10.5□□□□□ -0.73
CPNE1-218ENST00000439806 ATXN1LP0C7T5 689 aaKnown RBP10.5□□□□□ -0.73
CPNE1-218ENST00000439806 COX4I1P13073 169 aa10.5□□□□□ -0.73
CPNE1-218ENST00000439806 ATF6P18850 670 aa10.5□□□□□ -0.73
CPNE1-218ENST00000439806 ELF1P32519 619 aa10.5□□□□□ -0.73
CPNE1-218ENST00000439806 SERPINB5P36952 375 aa10.5□□□□□ -0.73
CPNE1-218ENST00000439806 VHLP40337 213 aa10.5□□□□□ -0.73
CPNE1-218ENST00000439806 TUFMP49411 452 aaKnown RBP10.5□□□□□ -0.73
CPNE1-218ENST00000439806 KCNQ1P51787 676 aa10.5□□□□□ -0.73
CPNE1-218ENST00000439806 PGGT1BP53609 377 aa10.5□□□□□ -0.73
CPNE1-218ENST00000439806 CLNS1AP54105 237 aaKnown RBP10.5□□□□□ -0.73
CPNE1-218ENST00000439806 NAGLUP54802 743 aa10.5□□□□□ -0.73
CPNE1-218ENST00000439806 OXCT1P55809 520 aa10.5□□□□□ -0.73
CPNE1-218ENST00000439806 DLG1Q12959 904 aa10.5□□□□□ -0.73
CPNE1-218ENST00000439806 GPNMBQ14956 572 aa10.5□□□□□ -0.73
CPNE1-218ENST00000439806 NAA25Q14CX7 972 aa10.5□□□□□ -0.73
CPNE1-218ENST00000439806 TAF12Q16514 161 aa10.5□□□□□ -0.73
CPNE1-218ENST00000439806 FAM83EQ2M2I3 478 aa10.5□□□□□ -0.73
CPNE1-218ENST00000439806 USP41Q3LFD5 358 aa10.5□□□□□ -0.73
CPNE1-218ENST00000439806 ARL13AQ5H913 290 aaPredicted RBP10.5□□□□□ -0.73
CPNE1-218ENST00000439806 TECRLQ5HYJ1 363 aa10.5□□□□□ -0.73
CPNE1-218ENST00000439806 IL31Q6EBC2 164 aa10.5□□□□□ -0.73
CPNE1-218ENST00000439806 FAM45BPQ6NSW5 357 aa10.5□□□□□ -0.73
CPNE1-218ENST00000439806 TAS1R1Q7RTX1 841 aa10.5□□□□□ -0.73
CPNE1-218ENST00000439806 SETD3Q86TU7 594 aaPredicted RBP10.5□□□□□ -0.73
CPNE1-218ENST00000439806 RNF135Q8IUD6 432 aa10.5□□□□□ -0.73
CPNE1-218ENST00000439806 PPFIBP2Q8ND30 876 aa10.5□□□□□ -0.73
CPNE1-218ENST00000439806 FAM45AQ8TCE6 357 aa10.5□□□□□ -0.73
CPNE1-218ENST00000439806 MAPK15Q8TD08 544 aa10.5□□□□□ -0.73
CPNE1-218ENST00000439806 BLOC1S5Q8TDH9 187 aa10.5□□□□□ -0.73
CPNE1-218ENST00000439806 STON2Q8WXE9 905 aa10.5□□□□□ -0.73
CPNE1-218ENST00000439806 N4BP2L2Q92802 583 aaPredicted RBP10.5□□□□□ -0.73
CPNE1-218ENST00000439806 HDAC10Q969S8 669 aa10.5□□□□□ -0.73
CPNE1-218ENST00000439806 TADA1Q96BN2 335 aa10.5□□□□□ -0.73
CPNE1-218ENST00000439806 PLD4Q96BZ4 506 aa10.5□□□□□ -0.73
CPNE1-218ENST00000439806 SGF29Q96ES7 293 aa10.5□□□□□ -0.73
CPNE1-218ENST00000439806 ZNF512Q96ME7 567 aaPredicted RBP10.5□□□□□ -0.73
CPNE1-218ENST00000439806 OMDQ99983 421 aa10.5□□□□□ -0.73
CPNE1-218ENST00000439806 CINPQ9BW66 212 aaPredicted RBP10.5□□□□□ -0.73
CPNE1-218ENST00000439806 UNKQ9C0B0 810 aaKnown RBP10.5□□□□□ -0.73
CPNE1-218ENST00000439806 RETREG1Q9H6L5 497 aa10.5□□□□□ -0.73
CPNE1-218ENST00000439806 IGSF5Q9NSI5 407 aa10.5□□□□□ -0.73
CPNE1-218ENST00000439806 GTSE1Q9NYZ3 720 aa10.5□□□□□ -0.73
CPNE1-218ENST00000439806 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.5□□□□□ -0.732e-6■■■■□ 24.6
CPNE1-218ENST00000439806 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.5□□□□□ -0.73
CPNE1-218ENST00000439806 MTRRQ9UBK8 725 aa10.5□□□□□ -0.73
CPNE1-218ENST00000439806 UBA2Q9UBT2 640 aaPredicted RBP10.5□□□□□ -0.73
CPNE1-218ENST00000439806 SEPT3Q9UH03 358 aa10.5□□□□□ -0.73
CPNE1-218ENST00000439806 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.5□□□□□ -0.73
CPNE1-218ENST00000439806 TET1Q8NFU7 2136 aa10.49□□□□□ -0.73
CPNE1-218ENST00000439806 GOLGA8QA0A0J9YX86 632 aa10.49□□□□□ -0.73
CPNE1-218ENST00000439806 LOC285095A0A1B0GVY8 99 aa10.49□□□□□ -0.73
CPNE1-218ENST00000439806 GOLGA8OA6NCC3 632 aa10.49□□□□□ -0.73
CPNE1-218ENST00000439806 MROH6A6NGR9 719 aa10.49□□□□□ -0.73
CPNE1-218ENST00000439806 TRPC5OSA6NMA1 111 aa10.49□□□□□ -0.73
CPNE1-218ENST00000439806 GOLGA8NF8WBI6 632 aa10.49□□□□□ -0.73
CPNE1-218ENST00000439806 MATN2O00339 956 aa10.49□□□□□ -0.73
CPNE1-218ENST00000439806 KIF3CO14782 793 aa10.49□□□□□ -0.73
CPNE1-218ENST00000439806 NVLO15381 856 aaKnown RBP10.49□□□□□ -0.73
CPNE1-218ENST00000439806 DCXO43602 365 aa10.49□□□□□ -0.73
CPNE1-218ENST00000439806 RPP40O75818 363 aaKnown RBP10.49□□□□□ -0.73
CPNE1-218ENST00000439806 LUC7L3O95232 432 aaKnown RBP10.49□□□□□ -0.73
CPNE1-218ENST00000439806 NDST3O95803 873 aa10.49□□□□□ -0.73
CPNE1-218ENST00000439806 GLP2RO95838 553 aa10.49□□□□□ -0.73
CPNE1-218ENST00000439806 RHOCP08134 193 aa10.49□□□□□ -0.73
CPNE1-218ENST00000439806 SERPINF2P08697 491 aa10.49□□□□□ -0.73
CPNE1-218ENST00000439806 HOXB8P17481 243 aaPredicted RBP10.49□□□□□ -0.73
CPNE1-218ENST00000439806 GLDCP23378 1020 aa10.49□□□□□ -0.73
CPNE1-218ENST00000439806 SLC6A4P31645 630 aa10.49□□□□□ -0.73
CPNE1-218ENST00000439806 GCKP35557 465 aa10.49□□□□□ -0.73
CPNE1-218ENST00000439806 CCR10P46092 362 aa10.49□□□□□ -0.73
CPNE1-218ENST00000439806 PTDSS1P48651 473 aaKnown RBP10.49□□□□□ -0.73
CPNE1-218ENST00000439806 CDH4P55283 916 aa10.49□□□□□ -0.73
CPNE1-218ENST00000439806 DNAJB13P59910 316 aa10.49□□□□□ -0.73
CPNE1-218ENST00000439806 SLC25A3Q00325 362 aa10.49□□□□□ -0.73
CPNE1-218ENST00000439806 PFKPQ01813 784 aa10.49□□□□□ -0.73
CPNE1-218ENST00000439806 GNA12Q03113 381 aa10.49□□□□□ -0.73
CPNE1-218ENST00000439806 SLC34A1Q06495 639 aa10.49□□□□□ -0.73
CPNE1-218ENST00000439806 SLC14A2Q15849 920 aa10.49□□□□□ -0.73
CPNE1-218ENST00000439806 TCTN1Q2MV58 587 aa10.49□□□□□ -0.73
CPNE1-218ENST00000439806 MUM1Q2TAK8 710 aa10.49□□□□□ -0.73
CPNE1-218ENST00000439806 C5orf22Q49AR2 442 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms