RNA–Protein interactions for RNA: ENST00000419334.1

EPCAM-203, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 3

Gene EPCAM, Length 609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-203ENST00000419334 PRR5-ARHGAP8B1AHC4 643 aa17.81■□□□□ 0.44
EPCAM-203ENST00000419334 UPK3BL2E5RIL1 263 aa17.81■□□□□ 0.44
EPCAM-203ENST00000419334 BCAT2O15382 392 aaPredicted RBP17.81■□□□□ 0.44
EPCAM-203ENST00000419334 SPINT1O43278 529 aa17.81■□□□□ 0.44
EPCAM-203ENST00000419334 ZSCAN12O43309 604 aa17.81■□□□□ 0.44
EPCAM-203ENST00000419334 HTRA2O43464 458 aaPredicted RBP17.81■□□□□ 0.44
EPCAM-203ENST00000419334 PCDH8O95206 1070 aa17.81■□□□□ 0.44
EPCAM-203ENST00000419334 JCHAINP01591 159 aa17.81■□□□□ 0.44
EPCAM-203ENST00000419334 SERPINF2P08697 491 aa17.81■□□□□ 0.44
EPCAM-203ENST00000419334 ITKQ08881 620 aa17.81■□□□□ 0.44
EPCAM-203ENST00000419334 SF3A2Q15428 464 aaKnown RBP17.81■□□□□ 0.44
EPCAM-203ENST00000419334 UGP2Q16851 508 aa17.81■□□□□ 0.44
EPCAM-203ENST00000419334 SETMARQ53H47 684 aaPredicted RBP17.81■□□□□ 0.44
EPCAM-203ENST00000419334 CCDC181Q5TID7 509 aa17.81■□□□□ 0.44
EPCAM-203ENST00000419334 TCEAL6Q6IPX3 200 aa17.81■□□□□ 0.44
EPCAM-203ENST00000419334 KIAA1161Q6NSJ0 714 aa17.81■□□□□ 0.44
EPCAM-203ENST00000419334 PRPF39Q86UA1 669 aaKnown RBP17.81■□□□□ 0.44
EPCAM-203ENST00000419334 ZC3H18Q86VM9 953 aaKnown RBP17.81■□□□□ 0.44
EPCAM-203ENST00000419334 HORMAD1Q86X24 394 aa17.81■□□□□ 0.44
EPCAM-203ENST00000419334 ZSWIM9Q86XI8 627 aa17.81■□□□□ 0.44
EPCAM-203ENST00000419334 REXO1L1PQ8IX06 675 aa17.81■□□□□ 0.44
EPCAM-203ENST00000419334 KIAA2013Q8IYS2 634 aa17.81■□□□□ 0.44
EPCAM-203ENST00000419334 C12orf50Q8NA57 414 aaPredicted RBP17.81■□□□□ 0.44
EPCAM-203ENST00000419334 ACTL9Q8TC94 416 aa17.81■□□□□ 0.44
EPCAM-203ENST00000419334 TCEAL3Q969E4 200 aa17.81■□□□□ 0.44
EPCAM-203ENST00000419334 FEM1CQ96JP0 617 aa17.81■□□□□ 0.44
EPCAM-203ENST00000419334 QKIQ96PU8 341 aaKnown RBP eCLIP17.81■□□□□ 0.44
EPCAM-203ENST00000419334 CAPN10Q9HC96 672 aa17.81■□□□□ 0.44
EPCAM-203ENST00000419334 SLC6A14Q9UN76 642 aa17.81■□□□□ 0.44
EPCAM-203ENST00000419334 DMTF1Q9Y222 760 aa17.81■□□□□ 0.44
EPCAM-203ENST00000419334 ADAMTS9Q9P2N4 1935 aa17.8■□□□□ 0.44
EPCAM-203ENST00000419334 MTSS1O43312 755 aa17.8■□□□□ 0.44
EPCAM-203ENST00000419334 CFIP05156 583 aa17.8■□□□□ 0.44
EPCAM-203ENST00000419334 XPAP23025 273 aaPredicted RBP17.8■□□□□ 0.44
EPCAM-203ENST00000419334 MAT2AP31153 395 aaKnown RBP17.8■□□□□ 0.44
EPCAM-203ENST00000419334 POLR2LP62875 67 aaKnown RBP17.8■□□□□ 0.44
EPCAM-203ENST00000419334 RPS21P63220 83 aaKnown RBP17.8■□□□□ 0.44
EPCAM-203ENST00000419334 RACK1P63244 317 aaKnown RBP17.8■□□□□ 0.44
EPCAM-203ENST00000419334 OTUD4Q01804 1114 aaKnown RBP17.8■□□□□ 0.44
EPCAM-203ENST00000419334 DSC2Q02487 901 aa17.8■□□□□ 0.44
EPCAM-203ENST00000419334 ELP6Q0PNE2 266 aa17.8■□□□□ 0.44
EPCAM-203ENST00000419334 KLF1Q13351 362 aaPredicted RBP17.8■□□□□ 0.44
EPCAM-203ENST00000419334 RPS6KA1Q15418 735 aa17.8■□□□□ 0.44
EPCAM-203ENST00000419334 TMEM259Q4ZIN3 620 aa17.8■□□□□ 0.44
EPCAM-203ENST00000419334 B4GALNT4Q76KP1 1039 aa17.8■□□□□ 0.44
EPCAM-203ENST00000419334 CNTD1Q8N815 330 aa17.8■□□□□ 0.44
EPCAM-203ENST00000419334 ARRDC2Q8TBH0 407 aa17.8■□□□□ 0.44
EPCAM-203ENST00000419334 NUSAP1Q9BXS6 441 aaKnown RBP17.8■□□□□ 0.44
EPCAM-203ENST00000419334 CARD9Q9H257 536 aa17.8■□□□□ 0.44
EPCAM-203ENST00000419334 TM9SF3Q9HD45 589 aa17.8■□□□□ 0.44
EPCAM-203ENST00000419334 GGT7Q9UJ14 662 aa17.8■□□□□ 0.44
EPCAM-203ENST00000419334 ZFR2Q9UPR6 939 aaKnown RBP17.8■□□□□ 0.44
EPCAM-203ENST00000419334 ITM2BQ9Y287 266 aa17.8■□□□□ 0.44
EPCAM-203ENST00000419334 TTLL3Q9Y4R7 772 aa17.8■□□□□ 0.44
EPCAM-203ENST00000419334 PCDHGC4Q9Y5F7 938 aa17.8■□□□□ 0.44
EPCAM-203ENST00000419334 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.8■□□□□ 0.44
EPCAM-203ENST00000419334 SLCO1B1Q9Y6L6 691 aa17.8■□□□□ 0.44
EPCAM-203ENST00000419334 LRRK1Q38SD2 2015 aa17.8■□□□□ 0.44
EPCAM-203ENST00000419334 TP53BP1Q12888 1972 aaPredicted RBP17.8■□□□□ 0.44
EPCAM-203ENST00000419334 WDR87Q6ZQQ6 2873 aa17.79■□□□□ 0.44
EPCAM-203ENST00000419334 LNP1A1A4G5 178 aa17.79■□□□□ 0.44
EPCAM-203ENST00000419334 GOLGA6L9A6NEM1 432 aa17.79■□□□□ 0.44
EPCAM-203ENST00000419334 NEMP1O14524 444 aa17.79■□□□□ 0.44
EPCAM-203ENST00000419334 PTPN3P26045 913 aa17.79■□□□□ 0.44
EPCAM-203ENST00000419334 GRIA4P48058 902 aa17.79■□□□□ 0.44
EPCAM-203ENST00000419334 AFF3P51826 1226 aaKnown RBP17.79■□□□□ 0.44
EPCAM-203ENST00000419334 IRX4P78413 519 aa17.79■□□□□ 0.44
EPCAM-203ENST00000419334 LMNB2Q03252 620 aa17.79■□□□□ 0.44
EPCAM-203ENST00000419334 TRAF2Q12933 501 aa17.79■□□□□ 0.44
EPCAM-203ENST00000419334 ZNF284Q2VY69 593 aa17.79■□□□□ 0.44
EPCAM-203ENST00000419334 TEX44Q53QW1 395 aa17.79■□□□□ 0.44
EPCAM-203ENST00000419334 SLC45A4Q5BKX6 768 aa17.79■□□□□ 0.44
EPCAM-203ENST00000419334 LRRC73Q5JTD7 316 aa17.79■□□□□ 0.44
EPCAM-203ENST00000419334 SEL1L2Q5TEA6 688 aa17.79■□□□□ 0.44
EPCAM-203ENST00000419334 SEL1L3Q68CR1 1132 aa17.79■□□□□ 0.44
EPCAM-203ENST00000419334 NAPEPLDQ6IQ20 393 aa17.79■□□□□ 0.44
EPCAM-203ENST00000419334 VAT1Q99536 393 aa17.79■□□□□ 0.44
EPCAM-203ENST00000419334 SEPT10Q9P0V9 454 aa17.79■□□□□ 0.44
EPCAM-203ENST00000419334 RIOK3O14730 519 aaKnown RBP17.78■□□□□ 0.44
EPCAM-203ENST00000419334 NIPAL4Q0D2K0 466 aa17.78■□□□□ 0.44
EPCAM-203ENST00000419334 WASHC5Q12768 1159 aa17.78■□□□□ 0.44
EPCAM-203ENST00000419334 IHHQ14623 411 aa17.78■□□□□ 0.44
EPCAM-203ENST00000419334 TMEM52BQ4KMG9 183 aa17.78■□□□□ 0.44
EPCAM-203ENST00000419334 AASDHQ4L235 1098 aaPredicted RBP17.78■□□□□ 0.44
EPCAM-203ENST00000419334 ERAP2Q6P179 960 aa17.78■□□□□ 0.44
EPCAM-203ENST00000419334 PAF1Q8N7H5 531 aa17.78■□□□□ 0.44
EPCAM-203ENST00000419334 TTC13Q8NBP0 860 aa17.78■□□□□ 0.44
EPCAM-203ENST00000419334 PDCD6IPQ8WUM4 868 aaKnown RBP17.78■□□□□ 0.44
EPCAM-203ENST00000419334 HTR3CQ8WXA8 447 aa17.78■□□□□ 0.44
EPCAM-203ENST00000419334 SERAC1Q96JX3 654 aa17.78■□□□□ 0.44
EPCAM-203ENST00000419334 TEKT5Q96M29 485 aa17.78■□□□□ 0.44
EPCAM-203ENST00000419334 SLC6A18Q96N87 628 aa17.78■□□□□ 0.44
EPCAM-203ENST00000419334 AGAP3Q96P47 875 aa17.78■□□□□ 0.44
EPCAM-203ENST00000419334 TLR10Q9BXR5 811 aa17.78■□□□□ 0.44
EPCAM-203ENST00000419334 CEP41Q9BYV8 373 aa17.78■□□□□ 0.44
EPCAM-203ENST00000419334 PCDH12Q9NPG4 1184 aa17.78■□□□□ 0.44
EPCAM-203ENST00000419334 RAI2Q9Y5P3 530 aa17.78■□□□□ 0.44
EPCAM-203ENST00000419334 PRAMEF26H0Y7S4 382 aa17.77■□□□□ 0.44
EPCAM-203ENST00000419334 H7C0C1 242 aa17.77■□□□□ 0.44
EPCAM-203ENST00000419334 FZD6O60353 706 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms