RNA–Protein interactions for RNA: ENST00000354421.7

C11orf54-202, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 1,733 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-202ENST00000354421 CASC4Q6P4E1 433 aa7.59□□□□□ -1.19
C11orf54-202ENST00000354421 PAOXQ6QHF9 649 aa7.59□□□□□ -1.19
C11orf54-202ENST00000354421 OLFML1Q6UWY5 402 aa7.59□□□□□ -1.19
C11orf54-202ENST00000354421 ISLR2Q6UXK2 745 aa7.59□□□□□ -1.19
C11orf54-202ENST00000354421 PRR23BQ6ZRT6 265 aa7.59□□□□□ -1.19
C11orf54-202ENST00000354421 ZBTB8OSQ8IWT0 167 aa7.59□□□□□ -1.19
C11orf54-202ENST00000354421 FIBCD1Q8N539 461 aa7.59□□□□□ -1.19
C11orf54-202ENST00000354421 TTC39CQ8N584 583 aa7.59□□□□□ -1.19
C11orf54-202ENST00000354421 ANKFN1Q8N957 763 aa7.59□□□□□ -1.19
C11orf54-202ENST00000354421 C1orf127Q8N9H9 656 aa7.59□□□□□ -1.19
C11orf54-202ENST00000354421 COLGALT1Q8NBJ5 622 aa7.59□□□□□ -1.19
C11orf54-202ENST00000354421 CXorf38Q8TB03 319 aa7.59□□□□□ -1.19
C11orf54-202ENST00000354421 SNRNP27Q8WVK2 155 aaKnown RBP7.59□□□□□ -1.19
C11orf54-202ENST00000354421 HTR3CQ8WXA8 447 aa7.59□□□□□ -1.19
C11orf54-202ENST00000354421 ASB9Q96DX5 294 aa7.59□□□□□ -1.19
C11orf54-202ENST00000354421 RMND5BQ96G75 393 aaPredicted RBP7.59□□□□□ -1.19
C11orf54-202ENST00000354421 PIWIL1Q96J94 861 aaKnown RBP7.59□□□□□ -1.19
C11orf54-202ENST00000354421 ZNF512Q96ME7 567 aaPredicted RBP7.59□□□□□ -1.19
C11orf54-202ENST00000354421 HEXIM2Q96MH2 286 aaKnown RBP7.59□□□□□ -1.19
C11orf54-202ENST00000354421 ANKRD60Q9BZ19 345 aa7.59□□□□□ -1.19
C11orf54-202ENST00000354421 C2orf40Q9H1Z8 148 aa7.59□□□□□ -1.19
C11orf54-202ENST00000354421 WDR55Q9H6Y2 383 aaPredicted RBP7.59□□□□□ -1.19
C11orf54-202ENST00000354421 CLK4Q9HAZ1 481 aaKnown RBP7.59□□□□□ -1.19
C11orf54-202ENST00000354421 NGRNQ9NPE2 291 aaKnown RBP7.59□□□□□ -1.19
C11orf54-202ENST00000354421 SYBUQ9NX95 663 aa7.59□□□□□ -1.19
C11orf54-202ENST00000354421 HESX1Q9UBX0 185 aa7.59□□□□□ -1.19
C11orf54-202ENST00000354421 PTBP2Q9UKA9 531 aaKnown RBP7.59□□□□□ -1.19
C11orf54-202ENST00000354421 SARDHQ9UL12 918 aa7.59□□□□□ -1.19
C11orf54-202ENST00000354421 RIPK3Q9Y572 518 aa7.59□□□□□ -1.19
C11orf54-202ENST00000354421 LTBP2Q14767 1821 aa7.59□□□□□ -1.19
C11orf54-202ENST00000354421 HELZ2Q9BYK8 2649 aaKnown RBP7.59□□□□□ -1.19
C11orf54-202ENST00000354421 CHD9Q3L8U1 2897 aa7.59□□□□□ -1.2
C11orf54-202ENST00000354421 WDR87Q6ZQQ6 2873 aa7.59□□□□□ -1.2
C11orf54-202ENST00000354421 ANK1P16157 1881 aa7.58□□□□□ -1.2
C11orf54-202ENST00000354421 A0A087WXM4 84 aa7.58□□□□□ -1.2
C11orf54-202ENST00000354421 A0A096LPK6 155 aa7.58□□□□□ -1.2
C11orf54-202ENST00000354421 DYTNA2CJ06 578 aa7.58□□□□□ -1.2
C11orf54-202ENST00000354421 C9IYK1 514 aa7.58□□□□□ -1.2
C11orf54-202ENST00000354421 CFLARO15519 480 aa7.58□□□□□ -1.2
C11orf54-202ENST00000354421 HTRA2O43464 458 aaPredicted RBP7.58□□□□□ -1.2
C11orf54-202ENST00000354421 GAS2O43903 313 aaKnown RBP7.58□□□□□ -1.2
C11orf54-202ENST00000354421 VAPBO95292 243 aa7.58□□□□□ -1.2
C11orf54-202ENST00000354421 MAP3K6O95382 1288 aa7.58□□□□□ -1.2
C11orf54-202ENST00000354421 ERVK-10P10266 1014 aa7.58□□□□□ -1.2
C11orf54-202ENST00000354421 PORP16435 677 aaPredicted RBP7.58□□□□□ -1.2
C11orf54-202ENST00000354421 PTPN1P18031 435 aaKnown RBP7.58□□□□□ -1.2
C11orf54-202ENST00000354421 SLC7A1P30825 629 aa7.58□□□□□ -1.2
C11orf54-202ENST00000354421 SDC4P31431 198 aa7.58□□□□□ -1.2
C11orf54-202ENST00000354421 SCNN1AP37088 669 aa7.58□□□□□ -1.2
C11orf54-202ENST00000354421 GATA4P43694 442 aa7.58□□□□□ -1.2
C11orf54-202ENST00000354421 ENTPD1P49961 510 aa7.58□□□□□ -1.2
C11orf54-202ENST00000354421 NDST2P52849 883 aa7.58□□□□□ -1.2
C11orf54-202ENST00000354421 SESN2P58004 480 aaPredicted RBP7.58□□□□□ -1.2
C11orf54-202ENST00000354421 PSME3P61289 254 aa7.58□□□□□ -1.2
C11orf54-202ENST00000354421 CRADDP78560 199 aa7.58□□□□□ -1.2
C11orf54-202ENST00000354421 SP2Q02086 613 aa7.58□□□□□ -1.2
C11orf54-202ENST00000354421 RHDQ02161 417 aa7.58□□□□□ -1.2
C11orf54-202ENST00000354421 PPIL2Q13356 520 aa7.58□□□□□ -1.2
C11orf54-202ENST00000354421 PDCD4Q53EL6 469 aaKnown RBP7.58□□□□□ -1.2
C11orf54-202ENST00000354421 IL23RQ5VWK5 629 aa7.58□□□□□ -1.2
C11orf54-202ENST00000354421 LIPMQ5VYY2 423 aa7.58□□□□□ -1.2
C11orf54-202ENST00000354421 NCBP2-AS2Q69YL0 99 aa7.58□□□□□ -1.2
C11orf54-202ENST00000354421 CMC1Q7Z7K0 106 aa7.58□□□□□ -1.2
C11orf54-202ENST00000354421 GPR180Q86V85 440 aa7.58□□□□□ -1.2
C11orf54-202ENST00000354421 TTC30AQ86WT1 665 aa7.58□□□□□ -1.2
C11orf54-202ENST00000354421 PACRGLQ8N7B6 248 aa7.58□□□□□ -1.2
C11orf54-202ENST00000354421 CENPIQ92674 756 aaPredicted RBP7.58□□□□□ -1.2
C11orf54-202ENST00000354421 USP13Q92995 863 aaPredicted RBP7.58□□□□□ -1.2
C11orf54-202ENST00000354421 EME1Q96AY2 570 aa7.58□□□□□ -1.2
C11orf54-202ENST00000354421 ATG4CQ96DT6 458 aa7.58□□□□□ -1.2
C11orf54-202ENST00000354421 AGAP3Q96P47 875 aa7.58□□□□□ -1.2
C11orf54-202ENST00000354421 CSPG4P5Q96PW8 444 aa7.58□□□□□ -1.2
C11orf54-202ENST00000354421 PCYT2Q99447 389 aa7.58□□□□□ -1.2
C11orf54-202ENST00000354421 DOK1Q99704 481 aa7.58□□□□□ -1.2
C11orf54-202ENST00000354421 TMEM79Q9BSE2 394 aa7.58□□□□□ -1.2
C11orf54-202ENST00000354421 MCMBPQ9BTE3 642 aa7.58□□□□□ -1.2
C11orf54-202ENST00000354421 C11orf84Q9BUA3 381 aaPredicted RBP7.58□□□□□ -1.2
C11orf54-202ENST00000354421 HIPK3Q9H422 1215 aa7.58□□□□□ -1.2
C11orf54-202ENST00000354421 RPAP3Q9H6T3 665 aaPredicted RBP7.58□□□□□ -1.2
C11orf54-202ENST00000354421 LRRC40Q9H9A6 602 aa7.58□□□□□ -1.2
C11orf54-202ENST00000354421 RPF1Q9H9Y2 349 aaKnown RBP7.58□□□□□ -1.2
C11orf54-202ENST00000354421 NMRAL1Q9HBL8 299 aa7.58□□□□□ -1.2
C11orf54-202ENST00000354421 DTLQ9NZJ0 730 aa7.58□□□□□ -1.2
C11orf54-202ENST00000354421 RCOR3Q9P2K3 495 aaPredicted RBP7.58□□□□□ -1.2
C11orf54-202ENST00000354421 BARX2Q9UMQ3 279 aaPredicted RBP7.58□□□□□ -1.2
C11orf54-202ENST00000354421 FZD1Q9UP38 647 aa7.58□□□□□ -1.2
C11orf54-202ENST00000354421 CDYLQ9Y232 598 aa7.58□□□□□ -1.2
C11orf54-202ENST00000354421 USP3Q9Y6I4 520 aa7.58□□□□□ -1.2
C11orf54-202ENST00000354421 PARP14Q460N5 1801 aa7.58□□□□□ -1.2
C11orf54-202ENST00000354421 KAT6AQ92794 2004 aa7.58□□□□□ -1.2
C11orf54-202ENST00000354421 TRIM64BA6NI03 449 aa7.58□□□□□ -1.2
C11orf54-202ENST00000354421 STX16-NPEPL1H3BU86 382 aa7.58□□□□□ -1.2
C11orf54-202ENST00000354421 ACKR2O00590 384 aa7.58□□□□□ -1.2
C11orf54-202ENST00000354421 TRIM24O15164 1050 aa7.58□□□□□ -1.2
C11orf54-202ENST00000354421 PAPSS1O43252 624 aaPredicted RBP7.58□□□□□ -1.2
C11orf54-202ENST00000354421 TIMM44O43615 452 aa7.58□□□□□ -1.2
C11orf54-202ENST00000354421 GRAP2O75791 330 aa7.58□□□□□ -1.2
C11orf54-202ENST00000354421 PIGNO95427 931 aa7.58□□□□□ -1.2
C11orf54-202ENST00000354421 STAU1O95793 577 aaKnown RBP7.58□□□□□ -1.2
C11orf54-202ENST00000354421 LTFP02788 710 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms