RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 B3GAT3O94766 335 aa15.35■□□□□ 0.05
DDX56-201ENST00000258772 IPO13O94829 963 aaKnown RBP15.35■□□□□ 0.05
DDX56-201ENST00000258772 ETS2P15036 469 aa15.35■□□□□ 0.05
DDX56-201ENST00000258772 PGFP49763 221 aa15.35■□□□□ 0.05
DDX56-201ENST00000258772 WNT3AP56704 352 aa15.35■□□□□ 0.05
DDX56-201ENST00000258772 DYNC1I2Q13409 638 aaKnown RBP15.35■□□□□ 0.05
DDX56-201ENST00000258772 CCL14Q16627 93 aa15.35■□□□□ 0.05
DDX56-201ENST00000258772 AGAP9Q5VTM2 703 aa15.35■□□□□ 0.05
DDX56-201ENST00000258772 AFMIDQ63HM1 303 aa15.35■□□□□ 0.05
DDX56-201ENST00000258772 PCDH20Q8N6Y1 951 aaKnown RBP15.35■□□□□ 0.05
DDX56-201ENST00000258772 TMEM102Q8N9M5 508 aaPredicted RBP15.35■□□□□ 0.05
DDX56-201ENST00000258772 HMGCLL1Q8TB92 370 aa15.35■□□□□ 0.05
DDX56-201ENST00000258772 CASP10Q92851 521 aa15.35■□□□□ 0.05
DDX56-201ENST00000258772 CCDC126Q96EE4 140 aa15.35■□□□□ 0.05
DDX56-201ENST00000258772 MEAF6Q9HAF1 191 aa15.35■□□□□ 0.05
DDX56-201ENST00000258772 TNFRSF12AQ9NP84 129 aa15.35■□□□□ 0.05
DDX56-201ENST00000258772 TBC1D13Q9NVG8 400 aa15.35■□□□□ 0.05
DDX56-201ENST00000258772 MPP6Q9NZW5 540 aa15.35■□□□□ 0.05
DDX56-201ENST00000258772 TRPV2Q9Y5S1 764 aa15.35■□□□□ 0.05
DDX56-201ENST00000258772 A8MT66 165 aa15.35■□□□□ 0.05
DDX56-201ENST00000258772 LEPRP48357 1165 aaKnown RBP15.35■□□□□ 0.05
DDX56-201ENST00000258772 PSMD8P48556 350 aa15.35■□□□□ 0.05
DDX56-201ENST00000258772 C1QTNF8P60827 252 aa15.35■□□□□ 0.05
DDX56-201ENST00000258772 STX5Q13190 355 aa15.35■□□□□ 0.05
DDX56-201ENST00000258772 TRIM25Q14258 630 aaKnown RBP15.35■□□□□ 0.05
DDX56-201ENST00000258772 PCSK7Q16549 785 aa15.35■□□□□ 0.05
DDX56-201ENST00000258772 FSCN1Q16658 493 aaKnown RBP15.35■□□□□ 0.05
DDX56-201ENST00000258772 NOMO2Q5JPE7 1267 aa15.35■□□□□ 0.05
DDX56-201ENST00000258772 RPS27LQ71UM5 84 aaKnown RBP15.35■□□□□ 0.05
DDX56-201ENST00000258772 OR10T2Q8NGX3 314 aa15.35■□□□□ 0.05
DDX56-201ENST00000258772 CALML6Q8TD86 181 aa15.35■□□□□ 0.05
DDX56-201ENST00000258772 ASB9Q96DX5 294 aa15.35■□□□□ 0.05
DDX56-201ENST00000258772 SMOC2Q9H3U7 446 aa15.35■□□□□ 0.05
DDX56-201ENST00000258772 ARNT2Q9HBZ2 717 aa15.35■□□□□ 0.05
DDX56-201ENST00000258772 EML4Q9HC35 981 aaKnown RBP15.35■□□□□ 0.05
DDX56-201ENST00000258772 TRPC7Q9HCX4 862 aa15.35■□□□□ 0.05
DDX56-201ENST00000258772 IPO11Q9UI26 975 aaKnown RBP15.35■□□□□ 0.05
DDX56-201ENST00000258772 CPA4Q9UI42 421 aa15.35■□□□□ 0.05
DDX56-201ENST00000258772 LZTS1Q9Y250 596 aa15.35■□□□□ 0.05
DDX56-201ENST00000258772 Q9Y3F1 56 aa15.35■□□□□ 0.05
DDX56-201ENST00000258772 UBDO15205 165 aa15.34■□□□□ 0.05
DDX56-201ENST00000258772 RNASEH2AO75792 299 aaKnown RBP15.34■□□□□ 0.05
DDX56-201ENST00000258772 OR6B1O95007 311 aa15.34■□□□□ 0.05
DDX56-201ENST00000258772 CYP11A1P05108 521 aa15.34■□□□□ 0.05
DDX56-201ENST00000258772 TFAP2AP05549 437 aa15.34■□□□□ 0.05
DDX56-201ENST00000258772 LTA4HP09960 611 aaKnown RBP15.34■□□□□ 0.05
DDX56-201ENST00000258772 CCDC166P0CW27 439 aa15.34■□□□□ 0.05
DDX56-201ENST00000258772 RPL5P46777 297 aaKnown RBP15.34■□□□□ 0.05
DDX56-201ENST00000258772 KDELC1Q6UW63 502 aa15.34■□□□□ 0.05
DDX56-201ENST00000258772 C14orf80Q86SX3 495 aa15.34■□□□□ 0.05
DDX56-201ENST00000258772 CUZD1Q86UP6 607 aa15.34■□□□□ 0.05
DDX56-201ENST00000258772 LRRC49Q8IUZ0 686 aa15.34■□□□□ 0.05
DDX56-201ENST00000258772 GALNT4Q8N4A0 578 aa15.34■□□□□ 0.05
DDX56-201ENST00000258772 AFAP1L2Q8N4X5 818 aa15.34■□□□□ 0.05
DDX56-201ENST00000258772 PRICKLE1Q96MT3 831 aaPredicted RBP15.34■□□□□ 0.05
DDX56-201ENST00000258772 MRGBPQ9NV56 204 aa15.34■□□□□ 0.05
DDX56-201ENST00000258772 EPS15L1Q9UBC2 864 aa15.34■□□□□ 0.05
DDX56-201ENST00000258772 BPTFQ12830 3046 aa15.34■□□□□ 0.05
DDX56-201ENST00000258772 HEATR9A2RTY3 570 aa15.34■□□□□ 0.05
DDX56-201ENST00000258772 E7ENX8 843 aa15.34■□□□□ 0.05
DDX56-201ENST00000258772 E9PAM4 449 aa15.34■□□□□ 0.05
DDX56-201ENST00000258772 RTN3O95197 1032 aaPredicted RBP15.34■□□□□ 0.05
DDX56-201ENST00000258772 CLPTM1O96005 669 aa15.34■□□□□ 0.05
DDX56-201ENST00000258772 RBP1P09455 135 aa15.34■□□□□ 0.05
DDX56-201ENST00000258772 CTSHP09668 335 aa15.34■□□□□ 0.05
DDX56-201ENST00000258772 ARSAP15289 507 aa15.34■□□□□ 0.05
DDX56-201ENST00000258772 CLCN5P51795 746 aa15.34■□□□□ 0.05
DDX56-201ENST00000258772 INHBEP58166 350 aa15.34■□□□□ 0.05
DDX56-201ENST00000258772 PDAP1Q13442 181 aaKnown RBP15.34■□□□□ 0.05
DDX56-201ENST00000258772 LSAMPQ13449 338 aa15.34■□□□□ 0.05
DDX56-201ENST00000258772 LRP8Q14114 963 aa15.34■□□□□ 0.05
DDX56-201ENST00000258772 SQLEQ14534 574 aa15.34■□□□□ 0.05
DDX56-201ENST00000258772 PSMD5Q16401 504 aa15.34■□□□□ 0.05
DDX56-201ENST00000258772 IL23RQ5VWK5 629 aa15.34■□□□□ 0.05
DDX56-201ENST00000258772 KLC3Q6P597 504 aa15.34■□□□□ 0.05
DDX56-201ENST00000258772 CD300LGQ6UXG3 332 aa15.34■□□□□ 0.05
DDX56-201ENST00000258772 RTL3Q8N8U3 475 aaKnown RBP15.34■□□□□ 0.05
DDX56-201ENST00000258772 UBXN10Q96LJ8 280 aa15.34■□□□□ 0.05
DDX56-201ENST00000258772 CNBD2Q96M20 576 aa15.34■□□□□ 0.05
DDX56-201ENST00000258772 UNC93B1Q9H1C4 597 aa15.34■□□□□ 0.05
DDX56-201ENST00000258772 SLC25A51Q9H1U9 297 aa15.34■□□□□ 0.05
DDX56-201ENST00000258772 NUDT5Q9UKK9 219 aa15.34■□□□□ 0.05
DDX56-201ENST00000258772 HS3ST4Q9Y661 456 aa15.34■□□□□ 0.05
DDX56-201ENST00000258772 TRPM7Q96QT4 1865 aa15.34■□□□□ 0.05
DDX56-201ENST00000258772 NLRC5Q86WI3 1866 aa15.33■□□□□ 0.05
DDX56-201ENST00000258772 PSMD12O00232 456 aaPredicted RBP15.33■□□□□ 0.05
DDX56-201ENST00000258772 FBP2O00757 339 aa15.33■□□□□ 0.05
DDX56-201ENST00000258772 MOCS2O96007 188 aaPredicted RBP15.33■□□□□ 0.05
DDX56-201ENST00000258772 POMCP01189 267 aa15.33■□□□□ 0.05
DDX56-201ENST00000258772 PLK1P53350 603 aa15.33■□□□□ 0.05
DDX56-201ENST00000258772 SLC5A3P53794 718 aa15.33■□□□□ 0.05
DDX56-201ENST00000258772 GK3PQ14409 553 aa15.33■□□□□ 0.05
DDX56-201ENST00000258772 ACAP2Q15057 778 aa15.33■□□□□ 0.05
DDX56-201ENST00000258772 MAPRE2Q15555 327 aa15.33■□□□□ 0.05
DDX56-201ENST00000258772 SLC14A2Q15849 920 aa15.33■□□□□ 0.05
DDX56-201ENST00000258772 PPP1R3AQ16821 1122 aa15.33■□□□□ 0.05
DDX56-201ENST00000258772 AGKQ53H12 422 aa15.33■□□□□ 0.05
DDX56-201ENST00000258772 MRPL10Q7Z7H8 261 aaKnown RBP15.33■□□□□ 0.05
DDX56-201ENST00000258772 SCD5Q86SK9 330 aa15.33■□□□□ 0.05
DDX56-201ENST00000258772 AHI1Q8N157 1196 aa15.33■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 157.3 ms