RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 PTPN3P26045 913 aa17.46■□□□□ 0.39
PHGDH-234ENST00000642041 MAGEA3P43357 314 aa17.46■□□□□ 0.39
PHGDH-234ENST00000642041 WASHC5Q12768 1159 aa17.46■□□□□ 0.39
PHGDH-234ENST00000642041 DNAJC3Q13217 504 aa17.46■□□□□ 0.39
PHGDH-234ENST00000642041 SLC14A2Q15849 920 aa17.46■□□□□ 0.39
PHGDH-234ENST00000642041 TTMPQ5BVD1 217 aa17.46■□□□□ 0.39
PHGDH-234ENST00000642041 PKN3Q6P5Z2 889 aa17.46■□□□□ 0.39
PHGDH-234ENST00000642041 SETD3Q86TU7 594 aaPredicted RBP17.46■□□□□ 0.39
PHGDH-234ENST00000642041 NLRP14Q86W24 1093 aa17.46■□□□□ 0.39
PHGDH-234ENST00000642041 ZNF567Q8N184 647 aa17.46■□□□□ 0.39
PHGDH-234ENST00000642041 FBXO36Q8NEA4 188 aa17.46■□□□□ 0.39
PHGDH-234ENST00000642041 PTCD2Q8WV60 388 aaKnown RBP17.46■□□□□ 0.39
PHGDH-234ENST00000642041 MAML1Q92585 1016 aa17.46■□□□□ 0.39
PHGDH-234ENST00000642041 ARL8AQ96BM9 186 aa17.46■□□□□ 0.39
PHGDH-234ENST00000642041 RSPRY1Q96DX4 576 aa17.46■□□□□ 0.39
PHGDH-234ENST00000642041 RPRD1AQ96P16 312 aaPredicted RBP17.46■□□□□ 0.39
PHGDH-234ENST00000642041 IL12RB2Q99665 862 aa17.46■□□□□ 0.39
PHGDH-234ENST00000642041 EBNA1BP2Q99848 306 aaKnown RBP17.46■□□□□ 0.39
PHGDH-234ENST00000642041 PSMC3IPQ9P2W1 217 aaPredicted RBP17.46■□□□□ 0.39
PHGDH-234ENST00000642041 STOML2Q9UJZ1 356 aa17.46■□□□□ 0.39
PHGDH-234ENST00000642041 CELSR3Q9NYQ7 3312 aa17.45■□□□□ 0.38
PHGDH-234ENST00000642041 ATG2BQ96BY7 2078 aa17.45■□□□□ 0.38
PHGDH-234ENST00000642041 RAMP2O60895 175 aa17.45■□□□□ 0.38
PHGDH-234ENST00000642041 MOCS2O96007 188 aaPredicted RBP17.45■□□□□ 0.38
PHGDH-234ENST00000642041 TACR2P21452 398 aa17.45■□□□□ 0.38
PHGDH-234ENST00000642041 SERPINB9P50453 376 aa17.45■□□□□ 0.38
PHGDH-234ENST00000642041 EPHA5P54756 1037 aa17.45■□□□□ 0.38
PHGDH-234ENST00000642041 IL10RBQ08334 325 aa17.45■□□□□ 0.38
PHGDH-234ENST00000642041 ADGRF1Q5T601 910 aa17.45■□□□□ 0.38
PHGDH-234ENST00000642041 LEKR1Q6ZMV7 388 aa17.45■□□□□ 0.38
PHGDH-234ENST00000642041 METTL3Q86U44 580 aaKnown RBP17.45■□□□□ 0.38
PHGDH-234ENST00000642041 CHSY1Q86X52 802 aa17.45■□□□□ 0.38
PHGDH-234ENST00000642041 MIB1Q86YT6 1006 aa17.45■□□□□ 0.38
PHGDH-234ENST00000642041 HS6ST3Q8IZP7 471 aa17.45■□□□□ 0.38
PHGDH-234ENST00000642041 TTC17Q96AE7 1141 aa17.45■□□□□ 0.38
PHGDH-234ENST00000642041 MTBPQ96DY7 904 aa17.45■□□□□ 0.38
PHGDH-234ENST00000642041 PRMT1Q99873 361 aaKnown RBP17.45■□□□□ 0.38
PHGDH-234ENST00000642041 IL22Q9GZX6 179 aa17.45■□□□□ 0.38
PHGDH-234ENST00000642041 SLC32A1Q9H598 525 aa17.45■□□□□ 0.38
PHGDH-234ENST00000642041 ANLNQ9NQW6 1124 aa17.45■□□□□ 0.38
PHGDH-234ENST00000642041 SAMD15Q9P1V8 674 aa17.45■□□□□ 0.38
PHGDH-234ENST00000642041 ZC3H7BQ9UGR2 993 aaKnown RBP17.45■□□□□ 0.38
PHGDH-234ENST00000642041 ZNF180Q9UJW8 692 aa17.45■□□□□ 0.38
PHGDH-234ENST00000642041 ABCA7Q8IZY2 2146 aa17.45■□□□□ 0.38
PHGDH-234ENST00000642041 H0Y626 953 aa17.44■□□□□ 0.38
PHGDH-234ENST00000642041 I6L893 689 aaPredicted RBP17.44■□□□□ 0.38
PHGDH-234ENST00000642041 MSI1O43347 362 aaKnown RBP17.44■□□□□ 0.38
PHGDH-234ENST00000642041 TMEM63AO94886 807 aa17.44■□□□□ 0.38
PHGDH-234ENST00000642041 TRIM16O95361 564 aa17.44■□□□□ 0.38
PHGDH-234ENST00000642041 METTL18O95568 372 aa17.44■□□□□ 0.38
PHGDH-234ENST00000642041 OAS1P00973 400 aaKnown RBP17.44■□□□□ 0.38
PHGDH-234ENST00000642041 POLBP06746 335 aa17.44■□□□□ 0.38
PHGDH-234ENST00000642041 VAV1P15498 845 aa17.44■□□□□ 0.38
PHGDH-234ENST00000642041 GJA1P17302 382 aa17.44■□□□□ 0.38
PHGDH-234ENST00000642041 MSH2P43246 934 aa17.44■□□□□ 0.38
PHGDH-234ENST00000642041 MPP3Q13368 585 aa17.44■□□□□ 0.38
PHGDH-234ENST00000642041 UAP1L1Q3KQV9 507 aa17.44■□□□□ 0.38
PHGDH-234ENST00000642041 PIK3R6Q5UE93 754 aa17.44■□□□□ 0.38
PHGDH-234ENST00000642041 ANKRD22Q5VYY1 191 aa17.44■□□□□ 0.38
PHGDH-234ENST00000642041 ZNF683Q8IZ20 524 aa17.44■□□□□ 0.38
PHGDH-234ENST00000642041 TTC8Q8TAM2 541 aa17.44■□□□□ 0.38
PHGDH-234ENST00000642041 GSDMBQ8TAX9 411 aa17.44■□□□□ 0.38
PHGDH-234ENST00000642041 NSMCE4AQ9NXX6 385 aa17.44■□□□□ 0.38
PHGDH-234ENST00000642041 CACNA2D2Q9NY47 1150 aa17.44■□□□□ 0.38
PHGDH-234ENST00000642041 GTSE1Q9NYZ3 720 aa17.44■□□□□ 0.38
PHGDH-234ENST00000642041 SEPT10Q9P0V9 454 aa17.44■□□□□ 0.38
PHGDH-234ENST00000642041 IPO11Q9UI26 975 aaKnown RBP17.44■□□□□ 0.38
PHGDH-234ENST00000642041 VANGL2Q9ULK5 521 aa17.44■□□□□ 0.38
PHGDH-234ENST00000642041 DFFAO00273 331 aa17.43■□□□□ 0.38
PHGDH-234ENST00000642041 MAFKO60675 156 aa17.43■□□□□ 0.38
PHGDH-234ENST00000642041 SHOX2O60902 331 aaPredicted RBP17.43■□□□□ 0.38
PHGDH-234ENST00000642041 FAM155BO75949 473 aa17.43■□□□□ 0.38
PHGDH-234ENST00000642041 OLFM2O95897 454 aa17.43■□□□□ 0.38
PHGDH-234ENST00000642041 MYL4P12829 197 aa17.43■□□□□ 0.38
PHGDH-234ENST00000642041 PGAM1P18669 254 aa17.43■□□□□ 0.38
PHGDH-234ENST00000642041 MDH1P40925 334 aaKnown RBP17.43■□□□□ 0.38
PHGDH-234ENST00000642041 ELK3P41970 407 aa17.43■□□□□ 0.38
PHGDH-234ENST00000642041 MAGOHP61326 146 aaKnown RBP17.43■□□□□ 0.38
PHGDH-234ENST00000642041 CDH17Q12864 832 aa17.43■□□□□ 0.38
PHGDH-234ENST00000642041 POLD3Q15054 466 aaPredicted RBP17.43■□□□□ 0.38
PHGDH-234ENST00000642041 TEAD2Q15562 447 aa17.43■□□□□ 0.38
PHGDH-234ENST00000642041 FNBP1LQ5T0N5 605 aa17.43■□□□□ 0.38
PHGDH-234ENST00000642041 MPP7Q5T2T1 576 aa17.43■□□□□ 0.38
PHGDH-234ENST00000642041 MARC1Q5VT66 337 aa17.43■□□□□ 0.38
PHGDH-234ENST00000642041 FBXL22Q6P050 247 aa17.43■□□□□ 0.38
PHGDH-234ENST00000642041 ADGRD1Q6QNK2 874 aa17.43■□□□□ 0.38
PHGDH-234ENST00000642041 PRUNE1Q86TP1 453 aa17.43■□□□□ 0.38
PHGDH-234ENST00000642041 LRRC6Q86X45 466 aa17.43■□□□□ 0.38
PHGDH-234ENST00000642041 OR2W6PQ8NHA6 318 aa17.43■□□□□ 0.38
PHGDH-234ENST00000642041 ARHGEF2Q92974 986 aaKnown RBP17.43■□□□□ 0.38
PHGDH-234ENST00000642041 STAMBPL1Q96FJ0 436 aa17.43■□□□□ 0.38
PHGDH-234ENST00000642041 KLF16Q9BXK1 252 aaPredicted RBP17.43■□□□□ 0.38
PHGDH-234ENST00000642041 SLC39A8Q9C0K1 460 aa17.43■□□□□ 0.38
PHGDH-234ENST00000642041 C10orf88Q9H8K7 445 aa17.43■□□□□ 0.38
PHGDH-234ENST00000642041 TMPRSS4Q9NRS4 437 aa17.43■□□□□ 0.38
PHGDH-234ENST00000642041 APC2O95996 2303 aa17.42■□□□□ 0.38
PHGDH-234ENST00000642041 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.42■□□□□ 0.38
PHGDH-234ENST00000642041 A0A1B0GVM2 712 aa17.42■□□□□ 0.38
PHGDH-234ENST00000642041 ILVBLA1L0T0 632 aa17.42■□□□□ 0.38
PHGDH-234ENST00000642041 TCAF2A6NFQ2 919 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms