RNA–Protein interactions for RNA: ENST00000610359.4

MUC1-221, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-221ENST00000610359 EDRF1Q3B7T1 1238 aa6.96□□□□□ -1.3
MUC1-221ENST00000610359 DCAF12Q5T6F0 453 aa6.96□□□□□ -1.3
MUC1-221ENST00000610359 SYPL2Q5VXT5 272 aa6.96□□□□□ -1.3
MUC1-221ENST00000610359 FBXL22Q6P050 247 aa6.96□□□□□ -1.3
MUC1-221ENST00000610359 PMF1Q6P1K2 205 aa6.96□□□□□ -1.3
MUC1-221ENST00000610359 C22orf39Q6P5X5 142 aa6.96□□□□□ -1.3
MUC1-221ENST00000610359 LINGO4Q6UY18 593 aa6.96□□□□□ -1.3
MUC1-221ENST00000610359 CCDC73Q6ZRK6 1079 aa6.96□□□□□ -1.3
MUC1-221ENST00000610359 NRSN1Q8IZ57 195 aa6.96□□□□□ -1.3
MUC1-221ENST00000610359 ATP11CQ8NB49 1132 aa6.96□□□□□ -1.3
MUC1-221ENST00000610359 TMC2Q8TDI7 906 aa6.96□□□□□ -1.3
MUC1-221ENST00000610359 IRGQQ8WZA9 623 aa6.96□□□□□ -1.3
MUC1-221ENST00000610359 SEMA4DQ92854 862 aa6.96□□□□□ -1.3
MUC1-221ENST00000610359 RNF34Q969K3 372 aa6.96□□□□□ -1.3
MUC1-221ENST00000610359 FUBP1Q96AE4 644 aaKnown RBP6.96□□□□□ -1.3
MUC1-221ENST00000610359 VOPP1Q96AW1 172 aa6.96□□□□□ -1.3
MUC1-221ENST00000610359 C19orf60Q96EN9 201 aa6.96□□□□□ -1.3
MUC1-221ENST00000610359 PPP1R16AQ96I34 528 aa6.96□□□□□ -1.3
MUC1-221ENST00000610359 LURAP1Q96LR2 239 aa6.96□□□□□ -1.3
MUC1-221ENST00000610359 ZSCAN31Q96LW9 406 aaPredicted RBP6.96□□□□□ -1.3
MUC1-221ENST00000610359 RANBP9Q96S59 729 aa6.96□□□□□ -1.3
MUC1-221ENST00000610359 RBM15Q96T37 977 aaKnown RBP eCLIP6.96□□□□□ -1.3
MUC1-221ENST00000610359 CTRCQ99895 268 aa6.96□□□□□ -1.3
MUC1-221ENST00000610359 ASPSCR1Q9BZE9 553 aa6.96□□□□□ -1.3
MUC1-221ENST00000610359 INTS2Q9H0H0 1204 aaKnown RBP6.96□□□□□ -1.3
MUC1-221ENST00000610359 ZSCAN16Q9H4T2 348 aaPredicted RBP6.96□□□□□ -1.3
MUC1-221ENST00000610359 CGNQ9P2M7 1197 aaKnown RBP6.96□□□□□ -1.3
MUC1-221ENST00000610359 VPS51Q9UID3 782 aa6.96□□□□□ -1.3
MUC1-221ENST00000610359 VPS28Q9UK41 221 aa6.96□□□□□ -1.3
MUC1-221ENST00000610359 SRPRBQ9Y5M8 271 aaKnown RBP6.96□□□□□ -1.3
MUC1-221ENST00000610359 OAS3Q9Y6K5 1087 aaKnown RBP6.96□□□□□ -1.3
MUC1-221ENST00000610359 CNTRLQ7Z7A1 2325 aa6.95□□□□□ -1.3
MUC1-221ENST00000610359 B4DGG1 531 aa6.95□□□□□ -1.3
MUC1-221ENST00000610359 B4E171 279 aa6.95□□□□□ -1.3
MUC1-221ENST00000610359 TOR1BO14657 336 aa6.95□□□□□ -1.3
MUC1-221ENST00000610359 KRT86O43790 486 aa6.95□□□□□ -1.3
MUC1-221ENST00000610359 EIF5BO60841 1220 aaKnown RBP6.95□□□□□ -1.3
MUC1-221ENST00000610359 MMP20O60882 483 aa6.95□□□□□ -1.3
MUC1-221ENST00000610359 DLGAP3O95886 979 aa6.95□□□□□ -1.3
MUC1-221ENST00000610359 IGLV3-25P01717 112 aa6.95□□□□□ -1.3
MUC1-221ENST00000610359 THRAP10827 490 aa6.95□□□□□ -1.3
MUC1-221ENST00000610359 CASP1P29466 404 aa6.95□□□□□ -1.3
MUC1-221ENST00000610359 CSF2RBP32927 897 aa6.95□□□□□ -1.3
MUC1-221ENST00000610359 TSPAN7P41732 249 aa6.95□□□□□ -1.3
MUC1-221ENST00000610359 STAT5AP42229 794 aa6.95□□□□□ -1.3
MUC1-221ENST00000610359 LEPRP48357 1165 aaKnown RBP6.95□□□□□ -1.3
MUC1-221ENST00000610359 GCLMP48507 274 aa6.95□□□□□ -1.3
MUC1-221ENST00000610359 COPB1P53618 953 aaKnown RBP6.95□□□□□ -1.3
MUC1-221ENST00000610359 MAZP56270 477 aaKnown RBP6.95□□□□□ -1.3
MUC1-221ENST00000610359 SRP54P61011 504 aaKnown RBP6.95□□□□□ -1.3
MUC1-221ENST00000610359 PITX1P78337 314 aaPredicted RBP6.95□□□□□ -1.3
MUC1-221ENST00000610359 NUCB2P80303 420 aa6.95□□□□□ -1.3
MUC1-221ENST00000610359 EIF4EBP2Q13542 120 aaPredicted RBP6.95□□□□□ -1.3
MUC1-221ENST00000610359 TRA2AQ13595 282 aaKnown RBP eCLIP6.95□□□□□ -1.3
MUC1-221ENST00000610359 NR1D2Q14995 579 aa6.95□□□□□ -1.3
MUC1-221ENST00000610359 IRF4Q15306 451 aa6.95□□□□□ -1.3
MUC1-221ENST00000610359 NR6A1Q15406 480 aa6.95□□□□□ -1.3
MUC1-221ENST00000610359 NKAIN2Q5VXU1 208 aa6.95□□□□□ -1.3
MUC1-221ENST00000610359 SPECC1LQ69YQ0 1117 aa6.95□□□□□ -1.3
MUC1-221ENST00000610359 FOXR2Q6PJQ5 311 aa6.95□□□□□ -1.3
MUC1-221ENST00000610359 ENPP7Q6UWV6 458 aa6.95□□□□□ -1.3
MUC1-221ENST00000610359 ZNF438Q7Z4V0 828 aa6.95□□□□□ -1.3
MUC1-221ENST00000610359 ZSCAN30Q86W11 494 aa6.95□□□□□ -1.3
MUC1-221ENST00000610359 C17orf82Q86X59 251 aaPredicted RBP6.95□□□□□ -1.3
MUC1-221ENST00000610359 FAM129CQ86XR2 697 aa6.95□□□□□ -1.3
MUC1-221ENST00000610359 SLC9A9Q8IVB4 645 aa6.95□□□□□ -1.3
MUC1-221ENST00000610359 FAM186BQ8IYM0 893 aa6.95□□□□□ -1.3
MUC1-221ENST00000610359 PDILTQ8N807 584 aa6.95□□□□□ -1.3
MUC1-221ENST00000610359 AGBL5Q8NDL9 886 aa6.95□□□□□ -1.3
MUC1-221ENST00000610359 FAM46DQ8NEK8 389 aa6.95□□□□□ -1.3
MUC1-221ENST00000610359 CCL4L1Q8NHW4 92 aa6.95□□□□□ -1.3
MUC1-221ENST00000610359 SLC35F5Q8WV83 523 aa6.95□□□□□ -1.3
MUC1-221ENST00000610359 EEF2KMTQ96G04 330 aa6.95□□□□□ -1.3
MUC1-221ENST00000610359 PDXPQ96GD0 296 aa6.95□□□□□ -1.3
MUC1-221ENST00000610359 BTN2A3PQ96KV6 586 aa6.95□□□□□ -1.3
MUC1-221ENST00000610359 CCDC114Q96M63 670 aa6.95□□□□□ -1.3
MUC1-221ENST00000610359 TNMDQ9H2S6 317 aa6.95□□□□□ -1.3
MUC1-221ENST00000610359 APMAPQ9HDC9 416 aa6.95□□□□□ -1.3
MUC1-221ENST00000610359 MLXIPLQ9NP71 852 aa6.95□□□□□ -1.3
MUC1-221ENST00000610359 SLC39A2Q9NP94 309 aa6.95□□□□□ -1.3
MUC1-221ENST00000610359 KBTBD4Q9NVX7 518 aa6.95□□□□□ -1.3
MUC1-221ENST00000610359 RRN3Q9NYV6 651 aa6.95□□□□□ -1.3
MUC1-221ENST00000610359 RCOR3Q9P2K3 495 aaPredicted RBP6.95□□□□□ -1.3
MUC1-221ENST00000610359 POLHQ9Y253 713 aa6.95□□□□□ -1.3
MUC1-221ENST00000610359 TBC1D30Q9Y2I9 924 aa6.95□□□□□ -1.3
MUC1-221ENST00000610359 TMEM184BQ9Y519 407 aaPredicted RBP6.95□□□□□ -1.3
MUC1-221ENST00000610359 CCDC88CQ9P219 2028 aa6.94□□□□□ -1.3
MUC1-221ENST00000610359 C16orf96A6NNT2 1141 aa6.94□□□□□ -1.3
MUC1-221ENST00000610359 KCNU1A8MYU2 1149 aa6.94□□□□□ -1.3
MUC1-221ENST00000610359 H3BQV1 296 aa6.94□□□□□ -1.3
MUC1-221ENST00000610359 O00370 1275 aa6.94□□□□□ -1.3
MUC1-221ENST00000610359 AREL1O15033 823 aa6.94□□□□□ -1.3
MUC1-221ENST00000610359 STK17BO94768 372 aa6.94□□□□□ -1.3
MUC1-221ENST00000610359 APOEP02649 317 aa6.94□□□□□ -1.3
MUC1-221ENST00000610359 TRIM49P0CI25 452 aa6.94□□□□□ -1.3
MUC1-221ENST00000610359 TRIM49CP0CI26 452 aa6.94□□□□□ -1.3
MUC1-221ENST00000610359 SETSIPP0DME0 302 aa6.94□□□□□ -1.3
MUC1-221ENST00000610359 ITIH2P19823 946 aa6.94□□□□□ -1.3
MUC1-221ENST00000610359 PDCP20941 246 aa6.94□□□□□ -1.3
MUC1-221ENST00000610359 BMP6P22004 513 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms