RNA–Protein interactions for RNA: ENST00000580540.1

SREBF1-219, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-219ENST00000580540 BNIP3Q12983 259 aa16.82■□□□□ 0.28
SREBF1-219ENST00000580540 FGL2Q14314 439 aa16.82■□□□□ 0.28
SREBF1-219ENST00000580540 INAVAQ3KP66 663 aa16.82■□□□□ 0.28
SREBF1-219ENST00000580540 SARM1Q6SZW1 724 aa16.82■□□□□ 0.28
SREBF1-219ENST00000580540 DBX2Q6ZNG2 339 aa16.82■□□□□ 0.28
SREBF1-219ENST00000580540 PTAR1Q7Z6K3 402 aaPredicted RBP16.82■□□□□ 0.28
SREBF1-219ENST00000580540 CAMK1DQ8IU85 385 aa16.82■□□□□ 0.28
SREBF1-219ENST00000580540 TMEM145Q8NBT3 493 aa16.82■□□□□ 0.28
SREBF1-219ENST00000580540 SLC35G2Q8TBE7 412 aa16.82■□□□□ 0.28
SREBF1-219ENST00000580540 VOPP1Q96AW1 172 aa16.82■□□□□ 0.28
SREBF1-219ENST00000580540 CDC6Q99741 560 aa16.82■□□□□ 0.28
SREBF1-219ENST00000580540 DKK3Q9UBP4 350 aa16.82■□□□□ 0.28
SREBF1-219ENST00000580540 TP53BP1Q12888 1972 aaPredicted RBP16.82■□□□□ 0.28
SREBF1-219ENST00000580540 RAD51BO15315 384 aa16.81■□□□□ 0.28
SREBF1-219ENST00000580540 HYAL3O43820 417 aaPredicted RBP16.81■□□□□ 0.28
SREBF1-219ENST00000580540 BUB1BO60566 1050 aaPredicted RBP16.81■□□□□ 0.28
SREBF1-219ENST00000580540 MMP20O60882 483 aa16.81■□□□□ 0.28
SREBF1-219ENST00000580540 FTH1P19P0C7X4 201 aa16.81■□□□□ 0.28
SREBF1-219ENST00000580540 SERPINB6P35237 376 aa16.81■□□□□ 0.28
SREBF1-219ENST00000580540 SCNN1BP51168 640 aa16.81■□□□□ 0.28
SREBF1-219ENST00000580540 TAS2R40P59535 323 aa16.81■□□□□ 0.28
SREBF1-219ENST00000580540 TBX2Q13207 712 aaPredicted RBP16.81■□□□□ 0.28
SREBF1-219ENST00000580540 ZNF235Q14590 738 aa16.81■□□□□ 0.28
SREBF1-219ENST00000580540 RFTN1Q14699 578 aaPredicted RBP16.81■□□□□ 0.28
SREBF1-219ENST00000580540 LBRQ14739 615 aaKnown RBP16.81■□□□□ 0.28
SREBF1-219ENST00000580540 GRM3Q14832 879 aa16.81■□□□□ 0.28
SREBF1-219ENST00000580540 SHBQ15464 509 aa16.81■□□□□ 0.28
SREBF1-219ENST00000580540 GCNT7Q6ZNI0 430 aa16.81■□□□□ 0.28
SREBF1-219ENST00000580540 Q6ZSR6 202 aa16.81■□□□□ 0.28
SREBF1-219ENST00000580540 CHCHD4Q8N4Q1 142 aa16.81■□□□□ 0.28
SREBF1-219ENST00000580540 OXR1Q8N573 874 aa16.81■□□□□ 0.28
SREBF1-219ENST00000580540 ATPAF2Q8N5M1 289 aa16.81■□□□□ 0.28
SREBF1-219ENST00000580540 OR13H1Q8NG92 308 aa16.81■□□□□ 0.28
SREBF1-219ENST00000580540 CXorf40AQ8TE69 158 aa16.81■□□□□ 0.28
SREBF1-219ENST00000580540 NSMCE1Q8WV22 266 aa16.81■□□□□ 0.28
SREBF1-219ENST00000580540 WRAP53Q9BUR4 548 aaKnown RBP16.81■□□□□ 0.28
SREBF1-219ENST00000580540 SCNM1Q9BWG6 230 aa16.81■□□□□ 0.28
SREBF1-219ENST00000580540 RBSNQ9H1K0 784 aa16.81■□□□□ 0.28
SREBF1-219ENST00000580540 ATP13A3Q9H7F0 1226 aa16.81■□□□□ 0.28
SREBF1-219ENST00000580540 ERVMER34-1Q9H9K5 563 aa16.81■□□□□ 0.28
SREBF1-219ENST00000580540 SEPT3Q9UH03 358 aa16.81■□□□□ 0.28
SREBF1-219ENST00000580540 APOBEC2Q9Y235 224 aaKnown RBP16.81■□□□□ 0.28
SREBF1-219ENST00000580540 HS3ST3A1Q9Y663 406 aa16.81■□□□□ 0.28
SREBF1-219ENST00000580540 FPGTO14772 594 aa16.8■□□□□ 0.28
SREBF1-219ENST00000580540 AREL1O15033 823 aa16.8■□□□□ 0.28
SREBF1-219ENST00000580540 YKT6O15498 198 aa16.8■□□□□ 0.28
SREBF1-219ENST00000580540 SPINT1O43278 529 aa16.8■□□□□ 0.28
SREBF1-219ENST00000580540 SDC3O75056 442 aa16.8■□□□□ 0.28
SREBF1-219ENST00000580540 PRKCGP05129 697 aa16.8■□□□□ 0.28
SREBF1-219ENST00000580540 ATXN1LP0C7T5 689 aaKnown RBP16.8■□□□□ 0.28
SREBF1-219ENST00000580540 IL4RP24394 825 aa16.8■□□□□ 0.28
SREBF1-219ENST00000580540 EPHA8P29322 1005 aaPredicted RBP16.8■□□□□ 0.28
SREBF1-219ENST00000580540 RENBPP51606 427 aa16.8■□□□□ 0.28
SREBF1-219ENST00000580540 SHC2P98077 582 aa16.8■□□□□ 0.28
SREBF1-219ENST00000580540 SEMG2Q02383 582 aa16.8■□□□□ 0.28
SREBF1-219ENST00000580540 SLC10A7Q0GE19 358 aa16.8■□□□□ 0.28
SREBF1-219ENST00000580540 TMCO4Q5TGY1 634 aa16.8■□□□□ 0.28
SREBF1-219ENST00000580540 SLCO6A1Q86UG4 719 aa16.8■□□□□ 0.28
SREBF1-219ENST00000580540 EID2Q8N6I1 236 aa16.8■□□□□ 0.28
SREBF1-219ENST00000580540 SAP25Q8TEE9 199 aa16.8■□□□□ 0.28
SREBF1-219ENST00000580540 TSC1Q92574 1164 aa16.8■□□□□ 0.28
SREBF1-219ENST00000580540 BMFQ96LC9 184 aa16.8■□□□□ 0.28
SREBF1-219ENST00000580540 ZNF641Q96N77 438 aaPredicted RBP16.8■□□□□ 0.28
SREBF1-219ENST00000580540 C1QTNF2Q9BXJ5 285 aa16.8■□□□□ 0.28
SREBF1-219ENST00000580540 FTSJ1Q9UET6 329 aa16.8■□□□□ 0.28
SREBF1-219ENST00000580540 LCMT1Q9UIC8 334 aa16.8■□□□□ 0.28
SREBF1-219ENST00000580540 TPRP12270 2363 aaKnown RBP16.79■□□□□ 0.28
SREBF1-219ENST00000580540 TTC24A2A3L6 582 aaPredicted RBP16.79■□□□□ 0.28
SREBF1-219ENST00000580540 POM121BA6NF01 834 aa16.79■□□□□ 0.28
SREBF1-219ENST00000580540 A6NNZ2 444 aa16.79■□□□□ 0.28
SREBF1-219ENST00000580540 MUSKO15146 869 aa16.79■□□□□ 0.28
SREBF1-219ENST00000580540 TM7SF2O76062 418 aa16.79■□□□□ 0.28
SREBF1-219ENST00000580540 TRIM16O95361 564 aa16.79■□□□□ 0.28
SREBF1-219ENST00000580540 KRT7P08729 469 aa16.79■□□□□ 0.28
SREBF1-219ENST00000580540 TNNT1P13805 278 aa16.79■□□□□ 0.28
SREBF1-219ENST00000580540 SERPINA4P29622 427 aa16.79■□□□□ 0.28
SREBF1-219ENST00000580540 RXRGP48443 463 aa16.79■□□□□ 0.28
SREBF1-219ENST00000580540 CSNK1DP48730 415 aa16.79■□□□□ 0.28
SREBF1-219ENST00000580540 ARSEP51690 589 aa16.79■□□□□ 0.28
SREBF1-219ENST00000580540 BCL2L1Q07817 233 aa16.79■□□□□ 0.28
SREBF1-219ENST00000580540 ELP6Q0PNE2 266 aa16.79■□□□□ 0.28
SREBF1-219ENST00000580540 DPYSL3Q14195 570 aa16.79■□□□□ 0.28
SREBF1-219ENST00000580540 PDK2Q15119 407 aa16.79■□□□□ 0.28
SREBF1-219ENST00000580540 UGP2Q16851 508 aa16.79■□□□□ 0.28
SREBF1-219ENST00000580540 ABI3BPQ7Z7G0 1075 aa16.79■□□□□ 0.28
SREBF1-219ENST00000580540 ZSCAN30Q86W11 494 aa16.79■□□□□ 0.28
SREBF1-219ENST00000580540 MAP7D3Q8IWC1 876 aa16.79■□□□□ 0.28
SREBF1-219ENST00000580540 BBS5Q8N3I7 341 aa16.79■□□□□ 0.28
SREBF1-219ENST00000580540 BAHD1Q8TBE0 780 aaPredicted RBP16.79■□□□□ 0.28
SREBF1-219ENST00000580540 ZNF599Q96NL3 588 aa16.79■□□□□ 0.28
SREBF1-219ENST00000580540 TUBGCP5Q96RT8 1024 aa16.79■□□□□ 0.28
SREBF1-219ENST00000580540 PCDH12Q9NPG4 1184 aa16.79■□□□□ 0.28
SREBF1-219ENST00000580540 RCOR3Q9P2K3 495 aaPredicted RBP16.79■□□□□ 0.28
SREBF1-219ENST00000580540 TNFSF14O43557 240 aa16.78■□□□□ 0.28
SREBF1-219ENST00000580540 MAFKO60675 156 aa16.78■□□□□ 0.28
SREBF1-219ENST00000580540 MAP3K6O95382 1288 aa16.78■□□□□ 0.28
SREBF1-219ENST00000580540 ZNF75DP51815 510 aa16.78■□□□□ 0.28
SREBF1-219ENST00000580540 NSUN2Q08J23 767 aaKnown RBP eCLIP16.78■□□□□ 0.28
SREBF1-219ENST00000580540 ANKRD20A8PQ5CZ79 823 aa16.78■□□□□ 0.28
SREBF1-219ENST00000580540 ZNF542PQ5EBM4 170 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms