RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 AGAP2Q99490 1192 aa5.44□□□□□ -1.54
VAPA-203ENST00000577539 DUSP16Q9BY84 665 aa5.44□□□□□ -1.54
VAPA-203ENST00000577539 VCXQ9H320 206 aa5.44□□□□□ -1.54
VAPA-203ENST00000577539 TLE6Q9H808 572 aa5.44□□□□□ -1.54
VAPA-203ENST00000577539 LRRC40Q9H9A6 602 aa5.44□□□□□ -1.54
VAPA-203ENST00000577539 IARS2Q9NSE4 1012 aaKnown RBP5.44□□□□□ -1.54
VAPA-203ENST00000577539 MOCS1Q9NZB8 636 aa5.44□□□□□ -1.54
VAPA-203ENST00000577539 MORF4L1Q9UBU8 362 aa5.44□□□□□ -1.54
VAPA-203ENST00000577539 TLK1Q9UKI8 766 aa5.44□□□□□ -1.54
VAPA-203ENST00000577539 RPL26L1Q9UNX3 145 aaKnown RBP5.44□□□□□ -1.54
VAPA-203ENST00000577539 FIS1Q9Y3D6 152 aa5.44□□□□□ -1.54
VAPA-203ENST00000577539 LRRC42Q9Y546 428 aa5.44□□□□□ -1.54
VAPA-203ENST00000577539 A0A096LPK6 155 aa5.44□□□□□ -1.54
VAPA-203ENST00000577539 YJEFN3A6XGL0 299 aa5.44□□□□□ -1.54
VAPA-203ENST00000577539 DFFAO00273 331 aa5.44□□□□□ -1.54
VAPA-203ENST00000577539 TXNDC9O14530 226 aa5.44□□□□□ -1.54
VAPA-203ENST00000577539 DCXO43602 365 aa5.44□□□□□ -1.54
VAPA-203ENST00000577539 PROCP04070 461 aa5.44□□□□□ -1.54
VAPA-203ENST00000577539 SERPINA6P08185 405 aa5.44□□□□□ -1.54
VAPA-203ENST00000577539 CYP2B6P20813 491 aa5.44□□□□□ -1.54
VAPA-203ENST00000577539 ADRA1BP35368 520 aa5.44□□□□□ -1.54
VAPA-203ENST00000577539 MAGEA6P43360 314 aa5.44□□□□□ -1.54
VAPA-203ENST00000577539 COPAP53621 1224 aa5.44□□□□□ -1.54
VAPA-203ENST00000577539 AP2B1P63010 937 aa5.44□□□□□ -1.54
VAPA-203ENST00000577539 WASHC5Q12768 1159 aa5.44□□□□□ -1.54
VAPA-203ENST00000577539 ZBTB6Q15916 424 aa5.44□□□□□ -1.54
VAPA-203ENST00000577539 ARL13BQ3SXY8 428 aa5.44□□□□□ -1.54
VAPA-203ENST00000577539 HSF5Q4G112 596 aaPredicted RBP5.44□□□□□ -1.54
VAPA-203ENST00000577539 MARK2Q7KZI7 788 aaKnown RBP5.44□□□□□ -1.54
VAPA-203ENST00000577539 ARCQ7LC44 396 aa5.44□□□□□ -1.54
VAPA-203ENST00000577539 PLEKHH3Q7Z736 793 aa5.44□□□□□ -1.54
VAPA-203ENST00000577539 UCMAQ8WVF2 138 aa5.44□□□□□ -1.54
VAPA-203ENST00000577539 PYDC1Q8WXC3 89 aa5.44□□□□□ -1.54
VAPA-203ENST00000577539 CENPIQ92674 756 aaPredicted RBP5.44□□□□□ -1.54
VAPA-203ENST00000577539 SENP8Q96LD8 212 aa5.44□□□□□ -1.54
VAPA-203ENST00000577539 GAD1Q99259 594 aa5.44□□□□□ -1.54
VAPA-203ENST00000577539 NAT9Q9BTE0 207 aa5.44□□□□□ -1.54
VAPA-203ENST00000577539 AP5M1Q9H0R1 490 aa5.44□□□□□ -1.54
VAPA-203ENST00000577539 SNX15Q9NRS6 342 aa5.44□□□□□ -1.54
VAPA-203ENST00000577539 SLC7A8Q9UHI5 535 aa5.44□□□□□ -1.54
VAPA-203ENST00000577539 CPA4Q9UI42 421 aa5.44□□□□□ -1.54
VAPA-203ENST00000577539 NRCAMQ92823 1304 aa5.44□□□□□ -1.54
VAPA-203ENST00000577539 TRIP11Q15643 1979 aa5.44□□□□□ -1.54
VAPA-203ENST00000577539 MYBPHLA2RUH7 354 aa5.43□□□□□ -1.54
VAPA-203ENST00000577539 DPPA5A6NC42 116 aa5.43□□□□□ -1.54
VAPA-203ENST00000577539 CASTOR2A6NHX0 329 aa5.43□□□□□ -1.54
VAPA-203ENST00000577539 PIRO00625 290 aa5.43□□□□□ -1.54
VAPA-203ENST00000577539 CFLARO15519 480 aa5.43□□□□□ -1.54
VAPA-203ENST00000577539 PHGDHO43175 533 aaKnown RBP5.43□□□□□ -1.54
VAPA-203ENST00000577539 GPR32O75388 356 aa5.43□□□□□ -1.54
VAPA-203ENST00000577539 DAB1O75553 588 aa5.43□□□□□ -1.54
VAPA-203ENST00000577539 DGKIO75912 1065 aa5.43□□□□□ -1.54
VAPA-203ENST00000577539 KLHL2O95198 593 aa5.43□□□□□ -1.54
VAPA-203ENST00000577539 MLNP12872 115 aa5.43□□□□□ -1.54
VAPA-203ENST00000577539 YBX3P16989 372 aaKnown RBP eCLIP5.43□□□□□ -1.542e-7■□□□□ 9.1
VAPA-203ENST00000577539 NUMBP49757 651 aa5.43□□□□□ -1.54
VAPA-203ENST00000577539 MPP3Q13368 585 aa5.43□□□□□ -1.54
VAPA-203ENST00000577539 USP10Q14694 798 aaKnown RBP5.43□□□□□ -1.54
VAPA-203ENST00000577539 TEX44Q53QW1 395 aa5.43□□□□□ -1.54
VAPA-203ENST00000577539 RALGPS1Q5JS13 557 aa5.43□□□□□ -1.54
VAPA-203ENST00000577539 PDPK2PQ6A1A2 396 aa5.43□□□□□ -1.54
VAPA-203ENST00000577539 IQSEC1Q6DN90 963 aa5.43□□□□□ -1.54
VAPA-203ENST00000577539 SDCCAG8Q86SQ7 713 aaPredicted RBP5.43□□□□□ -1.54
VAPA-203ENST00000577539 TLK2Q86UE8 772 aa5.43□□□□□ -1.54
VAPA-203ENST00000577539 ZNF354CQ86Y25 554 aa5.43□□□□□ -1.54
VAPA-203ENST00000577539 PSTKQ8IV42 348 aaKnown RBP5.43□□□□□ -1.54
VAPA-203ENST00000577539 PLD6Q8N2A8 252 aaKnown RBP5.43□□□□□ -1.54
VAPA-203ENST00000577539 CCNYL1Q8N7R7 359 aa5.43□□□□□ -1.54
VAPA-203ENST00000577539 ARRDC4Q8NCT1 418 aa5.43□□□□□ -1.54
VAPA-203ENST00000577539 IPMKQ8NFU5 416 aa5.43□□□□□ -1.54
VAPA-203ENST00000577539 NPLOC4Q8TAT6 608 aa5.43□□□□□ -1.54
VAPA-203ENST00000577539 HASPINQ8TF76 798 aa5.43□□□□□ -1.54
VAPA-203ENST00000577539 ARNTL2Q8WYA1 636 aa5.43□□□□□ -1.54
VAPA-203ENST00000577539 LPPQ93052 612 aa5.43□□□□□ -1.54
VAPA-203ENST00000577539 GTPBP3Q969Y2 492 aaKnown RBP5.43□□□□□ -1.54
VAPA-203ENST00000577539 SCLYQ96I15 445 aa5.43□□□□□ -1.54
VAPA-203ENST00000577539 ZNF333Q96JL9 665 aa5.43□□□□□ -1.54
VAPA-203ENST00000577539 FCRL3Q96P31 734 aaPredicted RBP5.43□□□□□ -1.54
VAPA-203ENST00000577539 SYT15Q9BQS2 421 aa5.43□□□□□ -1.54
VAPA-203ENST00000577539 TASP1Q9H6P5 420 aa5.43□□□□□ -1.54
VAPA-203ENST00000577539 WDCPQ9H6R7 721 aa5.43□□□□□ -1.54
VAPA-203ENST00000577539 CHRAC1Q9NRG0 131 aa5.43□□□□□ -1.54
VAPA-203ENST00000577539 SAGE1Q9NXZ1 904 aa5.43□□□□□ -1.54
VAPA-203ENST00000577539 SCOCQ9UIL1 159 aa5.43□□□□□ -1.54
VAPA-203ENST00000577539 PARP14Q460N5 1801 aa5.43□□□□□ -1.54
VAPA-203ENST00000577539 LCTP09848 1927 aa5.43□□□□□ -1.54
VAPA-203ENST00000577539 M0QZ92 97 aa5.43□□□□□ -1.54
VAPA-203ENST00000577539 AIM2O14862 343 aa5.43□□□□□ -1.54
VAPA-203ENST00000577539 ADCY6O43306 1168 aa5.43□□□□□ -1.54
VAPA-203ENST00000577539 KIF1CO43896 1103 aaKnown RBP5.43□□□□□ -1.54
VAPA-203ENST00000577539 SMIM24O75264 130 aa5.43□□□□□ -1.54
VAPA-203ENST00000577539 TM7SF2O76062 418 aa5.43□□□□□ -1.54
VAPA-203ENST00000577539 MOCS2O96007 188 aaPredicted RBP5.43□□□□□ -1.54
VAPA-203ENST00000577539 ZCCHC18P0CG32 403 aa5.43□□□□□ -1.54
VAPA-203ENST00000577539 FGF3P11487 239 aaPredicted RBP5.43□□□□□ -1.54
VAPA-203ENST00000577539 PTPN3P26045 913 aa5.43□□□□□ -1.54
VAPA-203ENST00000577539 MAGEA3P43357 314 aa5.43□□□□□ -1.54
VAPA-203ENST00000577539 ATXN3P54252 364 aaPredicted RBP5.43□□□□□ -1.54
VAPA-203ENST00000577539 ABCE1P61221 599 aaKnown RBP5.43□□□□□ -1.54
VAPA-203ENST00000577539 MRPS35P82673 323 aaKnown RBP5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms