RNA–Protein interactions for RNA: ENST00000554257.1

LINC00517-202, long intergenic non-protein coding RNA 517, humanhuman

TSL 2 BASIC

Gene LINC00517, Length 3,460 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-202ENST00000554257 NFS1Q9Y697 457 aa6.83□□□□□ -1.32
LINC00517-202ENST00000554257 ERI2A8K979 691 aaKnown RBP6.82□□□□□ -1.32
LINC00517-202ENST00000554257 SOCS5O75159 536 aa6.82□□□□□ -1.32
LINC00517-202ENST00000554257 SIN3BO75182 1162 aa6.82□□□□□ -1.32
LINC00517-202ENST00000554257 AVILO75366 819 aa6.82□□□□□ -1.32
LINC00517-202ENST00000554257 PGLSO95336 258 aa6.82□□□□□ -1.32
LINC00517-202ENST00000554257 AGTP01019 485 aa6.82□□□□□ -1.32
LINC00517-202ENST00000554257 POLR2EP19388 210 aaKnown RBP6.82□□□□□ -1.32
LINC00517-202ENST00000554257 CES1P23141 567 aa6.82□□□□□ -1.32
LINC00517-202ENST00000554257 GEMIN4P57678 1058 aaKnown RBP6.82□□□□□ -1.32
LINC00517-202ENST00000554257 TAS2R38P59533 333 aa6.82□□□□□ -1.32
LINC00517-202ENST00000554257 CDK16Q00536 496 aa6.82□□□□□ -1.32
LINC00517-202ENST00000554257 PFKPQ01813 784 aa6.82□□□□□ -1.32
LINC00517-202ENST00000554257 TMC3Q7Z5M5 1100 aa6.82□□□□□ -1.32
LINC00517-202ENST00000554257 YAF2Q8IY57 180 aa6.82□□□□□ -1.32
LINC00517-202ENST00000554257 UBALD2Q8IYN6 164 aa6.82□□□□□ -1.32
LINC00517-202ENST00000554257 TTC30BQ8N4P2 665 aa6.82□□□□□ -1.32
LINC00517-202ENST00000554257 PDCD7Q8N8D1 485 aaKnown RBP6.82□□□□□ -1.32
LINC00517-202ENST00000554257 TMIEQ8NEW7 156 aa6.82□□□□□ -1.32
LINC00517-202ENST00000554257 MDGA1Q8NFP4 955 aa6.82□□□□□ -1.32
LINC00517-202ENST00000554257 EXOC4Q96A65 974 aa6.82□□□□□ -1.32
LINC00517-202ENST00000554257 ARRDC3Q96B67 414 aa6.82□□□□□ -1.32
LINC00517-202ENST00000554257 EXOC2Q96KP1 924 aa6.82□□□□□ -1.32
LINC00517-202ENST00000554257 RAB17Q9H0T7 212 aa6.82□□□□□ -1.32
LINC00517-202ENST00000554257 MRM3Q9HC36 420 aaKnown RBP6.82□□□□□ -1.32
LINC00517-202ENST00000554257 LTB4R2Q9NPC1 389 aa6.82□□□□□ -1.32
LINC00517-202ENST00000554257 POLR3BQ9NW08 1133 aaPredicted RBP6.82□□□□□ -1.32
LINC00517-202ENST00000554257 ZNF446Q9NWS9 450 aa6.82□□□□□ -1.32
LINC00517-202ENST00000554257 RSPH14Q9UHP6 348 aa6.82□□□□□ -1.32
LINC00517-202ENST00000554257 FEZ2Q9UHY8 353 aaPredicted RBP6.82□□□□□ -1.32
LINC00517-202ENST00000554257 MUTYHQ9UIF7 546 aa6.82□□□□□ -1.32
LINC00517-202ENST00000554257 SPO11Q9Y5K1 396 aa6.82□□□□□ -1.32
LINC00517-202ENST00000554257 STON1Q9Y6Q2 735 aa6.82□□□□□ -1.32
LINC00517-202ENST00000554257 PIKFYVEQ9Y2I7 2098 aa6.82□□□□□ -1.32
LINC00517-202ENST00000554257 LDB2O43679 373 aa6.82□□□□□ -1.32
LINC00517-202ENST00000554257 PAPSS2O95340 614 aaPredicted RBP6.82□□□□□ -1.32
LINC00517-202ENST00000554257 GAS8O95995 478 aa6.82□□□□□ -1.32
LINC00517-202ENST00000554257 CA5AP35218 305 aa6.82□□□□□ -1.32
LINC00517-202ENST00000554257 CCNHP51946 323 aaPredicted RBP6.82□□□□□ -1.32
LINC00517-202ENST00000554257 AP1S1P61966 158 aa6.82□□□□□ -1.32
LINC00517-202ENST00000554257 MRPS21P82921 87 aaKnown RBP6.82□□□□□ -1.32
LINC00517-202ENST00000554257 CREB5Q02930 508 aa6.82□□□□□ -1.32
LINC00517-202ENST00000554257 NR1H3Q13133 447 aa6.82□□□□□ -1.32
LINC00517-202ENST00000554257 SKIV2LQ15477 1246 aaKnown RBP6.82□□□□□ -1.32
LINC00517-202ENST00000554257 ODF2Q5BJF6 829 aa6.82□□□□□ -1.32
LINC00517-202ENST00000554257 DNTTIP2Q5QJE6 756 aaKnown RBP6.82□□□□□ -1.32
LINC00517-202ENST00000554257 BEND6Q5SZJ8 279 aaPredicted RBP6.82□□□□□ -1.32
LINC00517-202ENST00000554257 TEX35Q5T0J7 233 aa6.82□□□□□ -1.32
LINC00517-202ENST00000554257 RETSATQ6NUM9 610 aa6.82□□□□□ -1.32
LINC00517-202ENST00000554257 AADATQ8N5Z0 425 aa6.82□□□□□ -1.32
LINC00517-202ENST00000554257 GRIN3AQ8TCU5 1115 aa6.82□□□□□ -1.32
LINC00517-202ENST00000554257 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.82□□□□□ -1.32
LINC00517-202ENST00000554257 FAM3CQ92520 227 aa6.82□□□□□ -1.32
LINC00517-202ENST00000554257 FUBP1Q96AE4 644 aaKnown RBP6.82□□□□□ -1.32
LINC00517-202ENST00000554257 OSBPL6Q9BZF3 934 aa6.82□□□□□ -1.32
LINC00517-202ENST00000554257 ZDHHC4Q9NPG8 344 aa6.82□□□□□ -1.32
LINC00517-202ENST00000554257 RAB6BQ9NRW1 208 aa6.82□□□□□ -1.32
LINC00517-202ENST00000554257 FAM114A2Q9NRY5 505 aa6.82□□□□□ -1.32
LINC00517-202ENST00000554257 EDDM13A0A1B0GTR0 161 aa6.82□□□□□ -1.32
LINC00517-202ENST00000554257 ALDH1A2O94788 518 aa6.82□□□□□ -1.32
LINC00517-202ENST00000554257 APODP05090 189 aa6.82□□□□□ -1.32
LINC00517-202ENST00000554257 HLA-EP13747 358 aa6.82□□□□□ -1.32
LINC00517-202ENST00000554257 CHRNA4P43681 627 aa6.82□□□□□ -1.32
LINC00517-202ENST00000554257 RPS9P46781 194 aaKnown RBP6.82□□□□□ -1.32
LINC00517-202ENST00000554257 ARCN1P48444 511 aaKnown RBP6.82□□□□□ -1.32
LINC00517-202ENST00000554257 ZNF140P52738 457 aaPredicted RBP6.82□□□□□ -1.32
LINC00517-202ENST00000554257 WNT3AP56704 352 aa6.82□□□□□ -1.32
LINC00517-202ENST00000554257 SPARCL1Q14515 664 aa6.82□□□□□ -1.32
LINC00517-202ENST00000554257 QPCTQ16769 361 aa6.82□□□□□ -1.32
LINC00517-202ENST00000554257 HSF5Q4G112 596 aaPredicted RBP6.82□□□□□ -1.32
LINC00517-202ENST00000554257 PIP5KL1Q5T9C9 394 aa6.82□□□□□ -1.32
LINC00517-202ENST00000554257 Q6ZS52 159 aa6.82□□□□□ -1.32
LINC00517-202ENST00000554257 TPRG1Q6ZUI0 275 aa6.82□□□□□ -1.32
LINC00517-202ENST00000554257 MAML2Q8IZL2 1156 aaPredicted RBP6.82□□□□□ -1.32
LINC00517-202ENST00000554257 PJA1Q8NG27 643 aa6.82□□□□□ -1.32
LINC00517-202ENST00000554257 CSGALNACT1Q8TDX6 532 aa6.82□□□□□ -1.32
LINC00517-202ENST00000554257 FCRL3Q96P31 734 aaPredicted RBP6.82□□□□□ -1.32
LINC00517-202ENST00000554257 TBL1YQ9BQ87 522 aa6.82□□□□□ -1.32
LINC00517-202ENST00000554257 TRIM56Q9BRZ2 755 aaKnown RBP6.82□□□□□ -1.32
LINC00517-202ENST00000554257 CINPQ9BW66 212 aaPredicted RBP6.82□□□□□ -1.32
LINC00517-202ENST00000554257 DPH5Q9H2P9 285 aa6.82□□□□□ -1.32
LINC00517-202ENST00000554257 ARHGEF3Q9NR81 526 aa6.82□□□□□ -1.32
LINC00517-202ENST00000554257 SEPT10Q9P0V9 454 aa6.82□□□□□ -1.32
LINC00517-202ENST00000554257 SLC25A13Q9UJS0 675 aa6.82□□□□□ -1.32
LINC00517-202ENST00000554257 ZCWPW2A0A1B0GU75 182 aa6.81□□□□□ -1.32
LINC00517-202ENST00000554257 SMAPO00193 183 aa6.81□□□□□ -1.32
LINC00517-202ENST00000554257 AURKAO14965 403 aa6.81□□□□□ -1.32
LINC00517-202ENST00000554257 LHCGRP22888 699 aa6.81□□□□□ -1.32
LINC00517-202ENST00000554257 RPS14P62263 151 aaKnown RBP6.81□□□□□ -1.32
LINC00517-202ENST00000554257 ITPRIPL1Q6GPH6 555 aa6.81□□□□□ -1.32
LINC00517-202ENST00000554257 PID1Q7Z2X4 250 aa6.81□□□□□ -1.32
LINC00517-202ENST00000554257 PCGF5Q86SE9 256 aa6.81□□□□□ -1.32
LINC00517-202ENST00000554257 TMEM135Q86UB9 458 aa6.81□□□□□ -1.32
LINC00517-202ENST00000554257 RASSF3Q86WH2 238 aa6.81□□□□□ -1.32
LINC00517-202ENST00000554257 ZNF366Q8N895 744 aa6.81□□□□□ -1.32
LINC00517-202ENST00000554257 OR13J1Q8NGT2 312 aa6.81□□□□□ -1.32
LINC00517-202ENST00000554257 ZNF641Q96N77 438 aaPredicted RBP6.81□□□□□ -1.32
LINC00517-202ENST00000554257 SPON2Q9BUD6 331 aa6.81□□□□□ -1.32
LINC00517-202ENST00000554257 KIFC1Q9BW19 673 aa6.81□□□□□ -1.32
LINC00517-202ENST00000554257 LRRC40Q9H9A6 602 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms