RNA–Protein interactions for RNA: ENST00000514313.1

NUP54-215, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-215ENST00000514313 HSPB2Q16082 182 aa7.69□□□□□ -1.18
NUP54-215ENST00000514313 CCDC184Q52MB2 194 aa7.69□□□□□ -1.18
NUP54-215ENST00000514313 ALG10Q5BKT4 473 aa7.69□□□□□ -1.18
NUP54-215ENST00000514313 BMP2KLQ5H9B9 411 aa7.69□□□□□ -1.18
NUP54-215ENST00000514313 ALG10BQ5I7T1 473 aa7.69□□□□□ -1.18
NUP54-215ENST00000514313 GPR139Q6DWJ6 353 aa7.69□□□□□ -1.18
NUP54-215ENST00000514313 NAA16Q6N069 864 aaPredicted RBP7.69□□□□□ -1.18
NUP54-215ENST00000514313 CPLX2Q6PUV4 134 aaKnown RBP7.69□□□□□ -1.18
NUP54-215ENST00000514313 CRIP3Q6Q6R5 217 aa7.69□□□□□ -1.18
NUP54-215ENST00000514313 ARHGEF25Q86VW2 580 aa7.69□□□□□ -1.18
NUP54-215ENST00000514313 TICAM1Q8IUC6 712 aa7.69□□□□□ -1.18
NUP54-215ENST00000514313 DDIASQ8IXT1 998 aa7.69□□□□□ -1.18
NUP54-215ENST00000514313 PGAM5Q96HS1 289 aa7.69□□□□□ -1.18
NUP54-215ENST00000514313 BAG1Q99933 345 aaPredicted RBP7.69□□□□□ -1.18
NUP54-215ENST00000514313 TKTL2Q9H0I9 626 aa7.69□□□□□ -1.18
NUP54-215ENST00000514313 CFDP1Q9UEE9 299 aaPredicted RBP7.69□□□□□ -1.18
NUP54-215ENST00000514313 CNOT8Q9UFF9 292 aaKnown RBP7.69□□□□□ -1.18
NUP54-215ENST00000514313 UTS2RQ9UKP6 389 aa7.69□□□□□ -1.18
NUP54-215ENST00000514313 AAR2Q9Y312 384 aaKnown RBP7.69□□□□□ -1.18
NUP54-215ENST00000514313 ZNF711Q9Y462 761 aa7.69□□□□□ -1.18
NUP54-215ENST00000514313 TSPY2A6NKD2 308 aa7.68□□□□□ -1.18
NUP54-215ENST00000514313 RNMTO43148 476 aaKnown RBP7.68□□□□□ -1.18
NUP54-215ENST00000514313 SEC14L5O43304 696 aa7.68□□□□□ -1.18
NUP54-215ENST00000514313 MT-CYBP00156 380 aaPredicted RBP7.68□□□□□ -1.18
NUP54-215ENST00000514313 TUBBP07437 444 aa7.68□□□□□ -1.18
NUP54-215ENST00000514313 TSPY3P0CV98 308 aa7.68□□□□□ -1.18
NUP54-215ENST00000514313 TSPY8P0CW00 308 aa7.68□□□□□ -1.18
NUP54-215ENST00000514313 CIITAP33076 1130 aa7.68□□□□□ -1.18
NUP54-215ENST00000514313 MRPL12P52815 198 aaKnown RBP7.68□□□□□ -1.18
NUP54-215ENST00000514313 TUBA4AP68366 448 aa7.68□□□□□ -1.18
NUP54-215ENST00000514313 HSF1Q00613 529 aa7.68□□□□□ -1.18
NUP54-215ENST00000514313 TSPY1Q01534 308 aa7.68□□□□□ -1.18
NUP54-215ENST00000514313 TFF2Q03403 129 aa7.68□□□□□ -1.18
NUP54-215ENST00000514313 ZNF268Q14587 947 aaPredicted RBP7.68□□□□□ -1.18
NUP54-215ENST00000514313 EARS2Q5JPH6 523 aaKnown RBP7.68□□□□□ -1.18
NUP54-215ENST00000514313 ENTPD8Q5MY95 495 aa7.68□□□□□ -1.18
NUP54-215ENST00000514313 FCRLBQ6BAA4 426 aa7.68□□□□□ -1.18
NUP54-215ENST00000514313 JADE1Q6IE81 842 aa7.68□□□□□ -1.18
NUP54-215ENST00000514313 GLDNQ6ZMI3 551 aaPredicted RBP7.68□□□□□ -1.18
NUP54-215ENST00000514313 CLEC17AQ6ZS10 378 aa7.68□□□□□ -1.18
NUP54-215ENST00000514313 LINC00346Q8IVM7 164 aa7.68□□□□□ -1.18
NUP54-215ENST00000514313 C8orf58Q8NAV2 365 aa7.68□□□□□ -1.18
NUP54-215ENST00000514313 IGFBPL1Q8WX77 278 aa7.68□□□□□ -1.18
NUP54-215ENST00000514313 NELL1Q92832 810 aa7.68□□□□□ -1.18
NUP54-215ENST00000514313 CLMNQ96JQ2 1002 aa7.68□□□□□ -1.18
NUP54-215ENST00000514313 ZMAT2Q96NC0 199 aaKnown RBP7.68□□□□□ -1.18
NUP54-215ENST00000514313 SIN3AQ96ST3 1273 aa7.68□□□□□ -1.18
NUP54-215ENST00000514313 SRSF8Q9BRL6 282 aaKnown RBP7.68□□□□□ -1.18
NUP54-215ENST00000514313 KRTAP9-9Q9BYP9 154 aa7.68□□□□□ -1.18
NUP54-215ENST00000514313 KRTAP9-4Q9BYQ2 154 aa7.68□□□□□ -1.18
NUP54-215ENST00000514313 SEMA4GQ9NTN9 838 aa7.68□□□□□ -1.18
NUP54-215ENST00000514313 MRPL15Q9P015 296 aaKnown RBP7.68□□□□□ -1.18
NUP54-215ENST00000514313 FBXL17Q9UF56 701 aa7.68□□□□□ -1.18
NUP54-215ENST00000514313 A0A087X1B8 175 aa7.67□□□□□ -1.18
NUP54-215ENST00000514313 MATN3O15232 486 aa7.67□□□□□ -1.18
NUP54-215ENST00000514313 TP73O15350 636 aa7.67□□□□□ -1.18
NUP54-215ENST00000514313 UGDHO60701 494 aa7.67□□□□□ -1.18
NUP54-215ENST00000514313 C1QL1O75973 258 aa7.67□□□□□ -1.18
NUP54-215ENST00000514313 NKX2-2O95096 273 aa7.67□□□□□ -1.18
NUP54-215ENST00000514313 ADRB1P08588 477 aa7.67□□□□□ -1.18
NUP54-215ENST00000514313 UNGP13051 313 aaPredicted RBP7.67□□□□□ -1.18
NUP54-215ENST00000514313 SLC15A1P46059 708 aa7.67□□□□□ -1.18
NUP54-215ENST00000514313 CLCN5P51795 746 aa7.67□□□□□ -1.18
NUP54-215ENST00000514313 TMEM266Q2M3C6 531 aa7.67□□□□□ -1.18
NUP54-215ENST00000514313 LCTLQ6UWM7 567 aa7.67□□□□□ -1.18
NUP54-215ENST00000514313 OLFML1Q6UWY5 402 aa7.67□□□□□ -1.18
NUP54-215ENST00000514313 SERPINA11Q86U17 422 aa7.67□□□□□ -1.18
NUP54-215ENST00000514313 NOXA1Q86UR1 476 aa7.67□□□□□ -1.18
NUP54-215ENST00000514313 DPP10Q8N608 796 aa7.67□□□□□ -1.18
NUP54-215ENST00000514313 POC5Q8NA72 575 aa7.67□□□□□ -1.18
NUP54-215ENST00000514313 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.67□□□□□ -1.18
NUP54-215ENST00000514313 BCAS4Q8TDM0 211 aa7.67□□□□□ -1.18
NUP54-215ENST00000514313 AAMDCQ9H7C9 122 aa7.67□□□□□ -1.18
NUP54-215ENST00000514313 MAGED1Q9Y5V3 778 aaPredicted RBP7.67□□□□□ -1.18
NUP54-215ENST00000514313 FAM169AQ9Y6X4 670 aa7.67□□□□□ -1.18
NUP54-215ENST00000514313 CDRT15L2A8MXV6 281 aa7.66□□□□□ -1.18
NUP54-215ENST00000514313 KLRF2D3W0D1 207 aa7.66□□□□□ -1.18
NUP54-215ENST00000514313 CTDSP2O14595 271 aa7.66□□□□□ -1.18
NUP54-215ENST00000514313 SCAMP1O15126 338 aa7.66□□□□□ -1.18
NUP54-215ENST00000514313 NDUFS3O75489 264 aa7.66□□□□□ -1.18
NUP54-215ENST00000514313 PCNAP12004 261 aa7.66□□□□□ -1.18
NUP54-215ENST00000514313 SELLP14151 372 aa7.66□□□□□ -1.18
NUP54-215ENST00000514313 SRD5A1P18405 259 aa7.66□□□□□ -1.18
NUP54-215ENST00000514313 SLC16A2P36021 539 aa7.66□□□□□ -1.18
NUP54-215ENST00000514313 NRIP1P48552 1158 aa7.66□□□□□ -1.18
NUP54-215ENST00000514313 PTH2RP49190 550 aa7.66□□□□□ -1.18
NUP54-215ENST00000514313 CFHR1Q03591 330 aa7.66□□□□□ -1.18
NUP54-215ENST00000514313 CDC16Q13042 620 aa7.66□□□□□ -1.18
NUP54-215ENST00000514313 ALDH1L2Q3SY69 923 aa7.66□□□□□ -1.18
NUP54-215ENST00000514313 LDLRAD3Q86YD5 345 aa7.66□□□□□ -1.18
NUP54-215ENST00000514313 TEX11Q8IYF3 940 aa7.66□□□□□ -1.18
NUP54-215ENST00000514313 LRRC57Q8N9N7 239 aa7.66□□□□□ -1.18
NUP54-215ENST00000514313 KCTD6Q8NC69 237 aa7.66□□□□□ -1.18
NUP54-215ENST00000514313 GPR150Q8NGU9 434 aa7.66□□□□□ -1.18
NUP54-215ENST00000514313 GABPB2Q8TAK5 448 aaPredicted RBP7.66□□□□□ -1.18
NUP54-215ENST00000514313 SLC22A18Q96BI1 424 aa7.66□□□□□ -1.18
NUP54-215ENST00000514313 ARHGEF26Q96DR7 871 aa7.66□□□□□ -1.18
NUP54-215ENST00000514313 ELMOD3Q96FG2 381 aa7.66□□□□□ -1.18
NUP54-215ENST00000514313 ZC3HAV1LQ96H79 300 aaKnown RBP7.66□□□□□ -1.18
NUP54-215ENST00000514313 MXRA8Q9BRK3 442 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms