RNA–Protein interactions for RNA: ENST00000505009.5

UBE2D3-218, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-218ENST00000505009 EBAG9O00559 213 aa4.8□□□□□ -1.64
UBE2D3-218ENST00000505009 KRT86O43790 486 aa4.8□□□□□ -1.64
UBE2D3-218ENST00000505009 CAMTA2O94983 1202 aa4.8□□□□□ -1.64
UBE2D3-218ENST00000505009 AFPP02771 609 aaKnown RBP4.8□□□□□ -1.64
UBE2D3-218ENST00000505009 ZNF8P17098 575 aaPredicted RBP4.8□□□□□ -1.64
UBE2D3-218ENST00000505009 TTKP33981 857 aa4.8□□□□□ -1.64
UBE2D3-218ENST00000505009 CXCR3P49682 368 aa4.8□□□□□ -1.64
UBE2D3-218ENST00000505009 YWHAZP63104 245 aaKnown RBP4.8□□□□□ -1.64
UBE2D3-218ENST00000505009 DDR1Q08345 913 aa4.8□□□□□ -1.64
UBE2D3-218ENST00000505009 KRT81Q14533 505 aa4.8□□□□□ -1.64
UBE2D3-218ENST00000505009 SLC39A14Q15043 492 aa4.8□□□□□ -1.64
UBE2D3-218ENST00000505009 EDRF1Q3B7T1 1238 aa4.8□□□□□ -1.64
UBE2D3-218ENST00000505009 C9orf50Q5SZB4 431 aa4.8□□□□□ -1.64
UBE2D3-218ENST00000505009 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.8□□□□□ -1.64
UBE2D3-218ENST00000505009 CPXM2Q8N436 756 aa4.8□□□□□ -1.64
UBE2D3-218ENST00000505009 CNOT9Q92600 299 aaKnown RBP4.8□□□□□ -1.64
UBE2D3-218ENST00000505009 COG8Q96MW5 612 aa4.8□□□□□ -1.64
UBE2D3-218ENST00000505009 HERPUD2Q9BSE4 406 aa4.8□□□□□ -1.64
UBE2D3-218ENST00000505009 STN1Q9H668 368 aaKnown RBP4.8□□□□□ -1.64
UBE2D3-218ENST00000505009 RETREG1Q9H6L5 497 aa4.8□□□□□ -1.64
UBE2D3-218ENST00000505009 GAREM1Q9H706 876 aa4.8□□□□□ -1.64
UBE2D3-218ENST00000505009 TXLNGQ9NUQ3 528 aa4.8□□□□□ -1.64
UBE2D3-218ENST00000505009 ICAM5Q9UMF0 924 aa4.8□□□□□ -1.64
UBE2D3-218ENST00000505009 SH2D7A6NKC9 451 aaPredicted RBP4.79□□□□□ -1.64
UBE2D3-218ENST00000505009 PEX12O00623 359 aa4.79□□□□□ -1.64
UBE2D3-218ENST00000505009 NBNO60934 754 aa4.79□□□□□ -1.64
UBE2D3-218ENST00000505009 MTA2O94776 668 aa4.79□□□□□ -1.64
UBE2D3-218ENST00000505009 PCNAP12004 261 aa4.79□□□□□ -1.64
UBE2D3-218ENST00000505009 FMO4P31512 558 aa4.79□□□□□ -1.64
UBE2D3-218ENST00000505009 RPL3P39023 403 aaKnown RBP4.79□□□□□ -1.64
UBE2D3-218ENST00000505009 MYBPHQ13203 477 aa4.79□□□□□ -1.64
UBE2D3-218ENST00000505009 SF3B4Q15427 424 aaKnown RBP eCLIP4.79□□□□□ -1.641e-6■□□□□ 8.5
UBE2D3-218ENST00000505009 CHD1LQ86WJ1 897 aa4.79□□□□□ -1.64
UBE2D3-218ENST00000505009 SFTPA2Q8IWL1 248 aa4.79□□□□□ -1.64
UBE2D3-218ENST00000505009 MB21D2Q8IYB1 491 aaPredicted RBP4.79□□□□□ -1.64
UBE2D3-218ENST00000505009 PGBD5Q8N414 524 aa4.79□□□□□ -1.64
UBE2D3-218ENST00000505009 RAB40AQ8WXH6 277 aa4.79□□□□□ -1.64
UBE2D3-218ENST00000505009 TRIB2Q92519 343 aa4.79□□□□□ -1.64
UBE2D3-218ENST00000505009 LRFN5Q96NI6 719 aa4.79□□□□□ -1.64
UBE2D3-218ENST00000505009 ARPC5LQ9BPX5 153 aa4.79□□□□□ -1.64
UBE2D3-218ENST00000505009 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.79□□□□□ -1.64
UBE2D3-218ENST00000505009 TAOK3Q9H2K8 898 aa4.79□□□□□ -1.64
UBE2D3-218ENST00000505009 SLC32A1Q9H598 525 aa4.79□□□□□ -1.64
UBE2D3-218ENST00000505009 ADGRF5Q8IZF2 1346 aa4.78□□□□□ -1.64
UBE2D3-218ENST00000505009 LOC102724159A0A0B4J2E5 919 aa4.78□□□□□ -1.64
UBE2D3-218ENST00000505009 TYW5A2RUC4 315 aaKnown RBP4.78□□□□□ -1.64
UBE2D3-218ENST00000505009 FAM90A7PA6NKC0 464 aa4.78□□□□□ -1.64
UBE2D3-218ENST00000505009 FAM90A22PA8MWA6 464 aa4.78□□□□□ -1.64
UBE2D3-218ENST00000505009 FAM90A12PA8MX19 464 aa4.78□□□□□ -1.64
UBE2D3-218ENST00000505009 FAM90A23PA8MXZ1 464 aa4.78□□□□□ -1.64
UBE2D3-218ENST00000505009 LDB3O75112 727 aa4.78□□□□□ -1.64
UBE2D3-218ENST00000505009 GAGE7O76087 117 aa4.78□□□□□ -1.64
UBE2D3-218ENST00000505009 VNN2O95498 520 aa4.78□□□□□ -1.64
UBE2D3-218ENST00000505009 CH25HO95992 272 aa4.78□□□□□ -1.64
UBE2D3-218ENST00000505009 GAGE12FP0CL80 117 aa4.78□□□□□ -1.64
UBE2D3-218ENST00000505009 GAGE12GP0CL81 117 aa4.78□□□□□ -1.64
UBE2D3-218ENST00000505009 GAGE12IP0CL82 117 aa4.78□□□□□ -1.64
UBE2D3-218ENST00000505009 TFPIP10646 304 aa4.78□□□□□ -1.64
UBE2D3-218ENST00000505009 PTPN2P17706 415 aa4.78□□□□□ -1.64
UBE2D3-218ENST00000505009 GPD2P43304 727 aa4.78□□□□□ -1.64
UBE2D3-218ENST00000505009 GAGE1Q13065 139 aa4.78□□□□□ -1.64
UBE2D3-218ENST00000505009 GAGE4Q13068 117 aa4.78□□□□□ -1.64
UBE2D3-218ENST00000505009 DHX34Q14147 1143 aaKnown RBP4.78□□□□□ -1.64
UBE2D3-218ENST00000505009 PWP2Q15269 919 aaKnown RBP4.78□□□□□ -1.64
UBE2D3-218ENST00000505009 ZNF718Q3SXZ3 478 aa4.78□□□□□ -1.64
UBE2D3-218ENST00000505009 SETMARQ53H47 684 aaPredicted RBP4.78□□□□□ -1.64
UBE2D3-218ENST00000505009 ZNF329Q86UD4 541 aa4.78□□□□□ -1.64
UBE2D3-218ENST00000505009 LURAP1LQ8IV03 231 aa4.78□□□□□ -1.64
UBE2D3-218ENST00000505009 ZNF114Q8NC26 417 aa4.78□□□□□ -1.64
UBE2D3-218ENST00000505009 ARRDC2Q8TBH0 407 aa4.78□□□□□ -1.64
UBE2D3-218ENST00000505009 GDPD5Q8WTR4 605 aa4.78□□□□□ -1.64
UBE2D3-218ENST00000505009 MROH8Q9H579 483 aa4.78□□□□□ -1.64
UBE2D3-218ENST00000505009 OR6C3Q9NZP0 311 aa4.78□□□□□ -1.64
UBE2D3-218ENST00000505009 MDFICQ9P1T7 246 aa4.78□□□□□ -1.64
UBE2D3-218ENST00000505009 MALT1Q9UDY8 824 aa4.78□□□□□ -1.64
UBE2D3-218ENST00000505009 KCNG2Q9UJ96 466 aa4.78□□□□□ -1.64
UBE2D3-218ENST00000505009 PCDHGB5Q9Y5G0 923 aa4.78□□□□□ -1.64
UBE2D3-218ENST00000505009 IGLV5-37A0A075B6J1 123 aa4.77□□□□□ -1.65
UBE2D3-218ENST00000505009 KLK10O43240 276 aa4.77□□□□□ -1.65
UBE2D3-218ENST00000505009 GUCY1B2O75343 617 aa4.77□□□□□ -1.65
UBE2D3-218ENST00000505009 SNRNP70P08621 437 aaKnown RBP4.77□□□□□ -1.65
UBE2D3-218ENST00000505009 SSTR2P30874 369 aa4.77□□□□□ -1.65
UBE2D3-218ENST00000505009 PPFIA1Q13136 1202 aa4.77□□□□□ -1.65
UBE2D3-218ENST00000505009 SLC12A1Q13621 1099 aa4.77□□□□□ -1.65
UBE2D3-218ENST00000505009 XKR9Q5GH70 373 aa4.77□□□□□ -1.65
UBE2D3-218ENST00000505009 MAP3K21Q5TCX8 1036 aa4.77□□□□□ -1.65
UBE2D3-218ENST00000505009 RHBDF2Q6PJF5 856 aa4.77□□□□□ -1.65
UBE2D3-218ENST00000505009 USP43Q70EL4 1123 aa4.77□□□□□ -1.65
UBE2D3-218ENST00000505009 MOB3CQ70IA8 216 aa4.77□□□□□ -1.65
UBE2D3-218ENST00000505009 ANKRD18AQ8IVF6 992 aa4.77□□□□□ -1.65
UBE2D3-218ENST00000505009 CCDC105Q8IYK2 499 aa4.77□□□□□ -1.65
UBE2D3-218ENST00000505009 AADATQ8N5Z0 425 aa4.77□□□□□ -1.65
UBE2D3-218ENST00000505009 RFWD2Q8NHY2 731 aa4.77□□□□□ -1.65
UBE2D3-218ENST00000505009 STAMQ92783 540 aa4.77□□□□□ -1.65
UBE2D3-218ENST00000505009 IGSF21Q96ID5 467 aa4.77□□□□□ -1.65
UBE2D3-218ENST00000505009 ADGRG7Q96K78 797 aa4.77□□□□□ -1.65
UBE2D3-218ENST00000505009 ZSCAN31Q96LW9 406 aaPredicted RBP4.77□□□□□ -1.65
UBE2D3-218ENST00000505009 TWNKQ96RR1 684 aa4.77□□□□□ -1.65
UBE2D3-218ENST00000505009 PKP4Q99569 1192 aa4.77□□□□□ -1.65
UBE2D3-218ENST00000505009 REEP2Q9BRK0 252 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms