RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 PSMD8P48556 350 aa13.88□□□□□ -0.19
NPHP4-207ENST00000470763 SP2Q02086 613 aa13.88□□□□□ -0.19
NPHP4-207ENST00000470763 KCNJ8Q15842 424 aa13.88□□□□□ -0.19
NPHP4-207ENST00000470763 NAT16Q8N8M0 369 aa13.88□□□□□ -0.19
NPHP4-207ENST00000470763 C1orf127Q8N9H9 656 aa13.88□□□□□ -0.19
NPHP4-207ENST00000470763 SLC7A14Q8TBB6 771 aa13.88□□□□□ -0.19
NPHP4-207ENST00000470763 TSNARE1Q96NA8 513 aa13.88□□□□□ -0.19
NPHP4-207ENST00000470763 TBCBQ99426 244 aa13.88□□□□□ -0.19
NPHP4-207ENST00000470763 C1orf50Q9BV19 199 aa13.88□□□□□ -0.19
NPHP4-207ENST00000470763 ZNF302Q9NR11 478 aa13.88□□□□□ -0.19
NPHP4-207ENST00000470763 TCAF1Q9Y4C2 921 aa13.88□□□□□ -0.19
NPHP4-207ENST00000470763 SLC30A1Q9Y6M5 507 aa13.88□□□□□ -0.19
NPHP4-207ENST00000470763 ZNF646O15015 1829 aaPredicted RBP13.88□□□□□ -0.19
NPHP4-207ENST00000470763 ZCWPW2A0A1B0GU75 182 aa13.88□□□□□ -0.19
NPHP4-207ENST00000470763 SLCO1B7G3V0H7 640 aa13.88□□□□□ -0.19
NPHP4-207ENST00000470763 MT-ND1P03886 318 aa13.88□□□□□ -0.19
NPHP4-207ENST00000470763 OXTRP30559 389 aa13.88□□□□□ -0.19
NPHP4-207ENST00000470763 USP10Q14694 798 aaKnown RBP13.88□□□□□ -0.19
NPHP4-207ENST00000470763 SAMD4BQ5PRF9 694 aaKnown RBP13.88□□□□□ -0.19
NPHP4-207ENST00000470763 CERCAMQ5T4B2 595 aa13.88□□□□□ -0.19
NPHP4-207ENST00000470763 PIWIL3Q7Z3Z3 882 aaKnown RBP13.88□□□□□ -0.19
NPHP4-207ENST00000470763 PELI3Q8N2H9 469 aa13.88□□□□□ -0.19
NPHP4-207ENST00000470763 CLEC4CQ8WTT0 213 aa13.88□□□□□ -0.19
NPHP4-207ENST00000470763 CPB2Q96IY4 423 aa13.88□□□□□ -0.19
NPHP4-207ENST00000470763 ALPK1Q96QP1 1244 aa13.88□□□□□ -0.19
NPHP4-207ENST00000470763 SIAEQ9HAT2 523 aa13.88□□□□□ -0.19
NPHP4-207ENST00000470763 GBA2Q9HCG7 927 aaPredicted RBP13.88□□□□□ -0.19
NPHP4-207ENST00000470763 SIP14410 1827 aa13.88□□□□□ -0.19
NPHP4-207ENST00000470763 DHRS12A0PJE2 317 aa13.87□□□□□ -0.19
NPHP4-207ENST00000470763 TRIM64A6NGJ6 449 aa13.87□□□□□ -0.19
NPHP4-207ENST00000470763 TMEM88BA6NKF7 163 aa13.87□□□□□ -0.19
NPHP4-207ENST00000470763 KPNA4O00629 521 aaPredicted RBP13.87□□□□□ -0.19
NPHP4-207ENST00000470763 CABYRO75952 493 aa13.87□□□□□ -0.19
NPHP4-207ENST00000470763 DDHD2O94830 711 aa13.87□□□□□ -0.19
NPHP4-207ENST00000470763 TPH1P17752 444 aa13.87□□□□□ -0.19
NPHP4-207ENST00000470763 PTPN9P43378 593 aa13.87□□□□□ -0.19
NPHP4-207ENST00000470763 NDST1P52848 882 aa13.87□□□□□ -0.19
NPHP4-207ENST00000470763 GHRHRQ02643 423 aa13.87□□□□□ -0.19
NPHP4-207ENST00000470763 DEPDC1Q5TB30 811 aa13.87□□□□□ -0.19
NPHP4-207ENST00000470763 CNSTQ6PJW8 725 aa13.87□□□□□ -0.19
NPHP4-207ENST00000470763 KCNMB4Q86W47 210 aa13.87□□□□□ -0.19
NPHP4-207ENST00000470763 ZNF567Q8N184 647 aa13.87□□□□□ -0.19
NPHP4-207ENST00000470763 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.87□□□□□ -0.19
NPHP4-207ENST00000470763 ZC3H15Q8WU90 426 aaKnown RBP13.87□□□□□ -0.19
NPHP4-207ENST00000470763 SEPT8Q92599 483 aa13.87□□□□□ -0.19
NPHP4-207ENST00000470763 GLT1D1Q96MS3 346 aa13.87□□□□□ -0.19
NPHP4-207ENST00000470763 C1QTNF1Q9BXJ1 281 aa13.87□□□□□ -0.19
NPHP4-207ENST00000470763 TMEM134Q9H6X4 195 aa13.87□□□□□ -0.19
NPHP4-207ENST00000470763 LRRC40Q9H9A6 602 aa13.87□□□□□ -0.19
NPHP4-207ENST00000470763 TNFRSF12AQ9NP84 129 aa13.87□□□□□ -0.19
NPHP4-207ENST00000470763 PCDH12Q9NPG4 1184 aa13.87□□□□□ -0.19
NPHP4-207ENST00000470763 IFT80Q9P2H3 777 aaPredicted RBP13.87□□□□□ -0.19
NPHP4-207ENST00000470763 MID2Q9UJV3 735 aa13.87□□□□□ -0.19
NPHP4-207ENST00000470763 ATP6AP2A0A1C7CYW4 349 aa13.87□□□□□ -0.19
NPHP4-207ENST00000470763 C9JVG2 144 aa13.87□□□□□ -0.19
NPHP4-207ENST00000470763 UBDO15205 165 aa13.87□□□□□ -0.19
NPHP4-207ENST00000470763 B4GALT5O43286 388 aa13.87□□□□□ -0.19
NPHP4-207ENST00000470763 ATP6AP2O75787 350 aa13.87□□□□□ -0.19
NPHP4-207ENST00000470763 PRKCBP05771 671 aa13.87□□□□□ -0.19
NPHP4-207ENST00000470763 PFKMP08237 780 aa13.87□□□□□ -0.19
NPHP4-207ENST00000470763 ELK4P28324 431 aa13.87□□□□□ -0.19
NPHP4-207ENST00000470763 NR2C2P49116 596 aa13.87□□□□□ -0.19
NPHP4-207ENST00000470763 IFRD2Q12894 506 aaPredicted RBP13.87□□□□□ -0.19
NPHP4-207ENST00000470763 DPYSL2Q16555 572 aa13.87□□□□□ -0.19
NPHP4-207ENST00000470763 GOLGA7BQ2TAP0 167 aa13.87□□□□□ -0.19
NPHP4-207ENST00000470763 ZPBP2Q6X784 338 aa13.87□□□□□ -0.19
NPHP4-207ENST00000470763 PID1Q7Z2X4 250 aa13.87□□□□□ -0.19
NPHP4-207ENST00000470763 CMTR2Q8IYT2 770 aaKnown RBP13.87□□□□□ -0.19
NPHP4-207ENST00000470763 TERB1Q8NA31 727 aa13.87□□□□□ -0.19
NPHP4-207ENST00000470763 CXorf38Q8TB03 319 aa13.87□□□□□ -0.19
NPHP4-207ENST00000470763 MAGEE2Q8TD90 523 aaPredicted RBP13.87□□□□□ -0.19
NPHP4-207ENST00000470763 KHSRPQ92945 711 aaKnown RBP eCLIP13.87□□□□□ -0.19
NPHP4-207ENST00000470763 CCDC138Q96M89 665 aa13.87□□□□□ -0.19
NPHP4-207ENST00000470763 CSF3RQ99062 836 aa13.87□□□□□ -0.19
NPHP4-207ENST00000470763 TPK1Q9H3S4 243 aa13.87□□□□□ -0.19
NPHP4-207ENST00000470763 CHRAC1Q9NRG0 131 aa13.87□□□□□ -0.19
NPHP4-207ENST00000470763 TMPRSS4Q9NRS4 437 aa13.87□□□□□ -0.19
NPHP4-207ENST00000470763 RNF146Q9NTX7 359 aa13.87□□□□□ -0.19
NPHP4-207ENST00000470763 TMEM181Q9P2C4 612 aa13.87□□□□□ -0.19
NPHP4-207ENST00000470763 POU2F3Q9UKI9 436 aa13.87□□□□□ -0.19
NPHP4-207ENST00000470763 VANGL2Q9ULK5 521 aa13.87□□□□□ -0.19
NPHP4-207ENST00000470763 ZFC3H1O60293 1989 aaKnown RBP13.87□□□□□ -0.19
NPHP4-207ENST00000470763 SNAP29O95721 258 aa13.87□□□□□ -0.19
NPHP4-207ENST00000470763 HSPA8P11142 646 aaKnown RBP13.87□□□□□ -0.19
NPHP4-207ENST00000470763 VDRP11473 427 aa13.87□□□□□ -0.19
NPHP4-207ENST00000470763 RPS12P25398 132 aaKnown RBP13.87□□□□□ -0.19
NPHP4-207ENST00000470763 GRM1Q13255 1194 aa13.87□□□□□ -0.19
NPHP4-207ENST00000470763 DNASE1L3Q13609 305 aa13.87□□□□□ -0.19
NPHP4-207ENST00000470763 OXA1LQ15070 435 aa13.87□□□□□ -0.19
NPHP4-207ENST00000470763 PGS1Q32NB8 556 aa13.87□□□□□ -0.19
NPHP4-207ENST00000470763 INTS11Q5TA45 600 aaKnown RBP13.87□□□□□ -0.19
NPHP4-207ENST00000470763 CST9Q5W186 159 aa13.87□□□□□ -0.19
NPHP4-207ENST00000470763 SLC41A1Q8IVJ1 513 aa13.87□□□□□ -0.19
NPHP4-207ENST00000470763 ANKRD52Q8NB46 1076 aa13.87□□□□□ -0.19
NPHP4-207ENST00000470763 SPPL2BQ8TCT7 592 aa13.87□□□□□ -0.19
NPHP4-207ENST00000470763 SNX19Q92543 992 aa13.87□□□□□ -0.19
NPHP4-207ENST00000470763 DUS3LQ96G46 650 aaKnown RBP13.87□□□□□ -0.19
NPHP4-207ENST00000470763 GMLQ99445 158 aa13.87□□□□□ -0.19
NPHP4-207ENST00000470763 CYP4F12Q9HCS2 524 aa13.87□□□□□ -0.19
NPHP4-207ENST00000470763 CCM2LQ9NUG4 571 aaPredicted RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms