RNA–Protein interactions for RNA: ENST00000469717.5

TPM3-215, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 4,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-215ENST00000469717 HOXC6P09630 235 aa8.02□□□□□ -1.13
TPM3-215ENST00000469717 NCK1P16333 377 aa8.02□□□□□ -1.13
TPM3-215ENST00000469717 PGAM1P18669 254 aa8.02□□□□□ -1.13
TPM3-215ENST00000469717 MAGP20916 626 aa8.02□□□□□ -1.13
TPM3-215ENST00000469717 CES1P23141 567 aa8.02□□□□□ -1.13
TPM3-215ENST00000469717 MYF6P23409 242 aa8.02□□□□□ -1.13
TPM3-215ENST00000469717 GJA9P57773 515 aa8.02□□□□□ -1.13
TPM3-215ENST00000469717 LSM3P62310 102 aaKnown RBP8.02□□□□□ -1.13
TPM3-215ENST00000469717 BAATQ14032 418 aaPredicted RBP8.02□□□□□ -1.13
TPM3-215ENST00000469717 DUOXA2Q1HG44 320 aa8.02□□□□□ -1.13
TPM3-215ENST00000469717 TIGD2Q4W5G0 525 aa8.02□□□□□ -1.13
TPM3-215ENST00000469717 SMUG1Q53HV7 270 aa8.02□□□□□ -1.13
TPM3-215ENST00000469717 FAAH2Q6GMR7 532 aa8.02□□□□□ -1.13
TPM3-215ENST00000469717 TBPL2Q6SJ96 375 aa8.02□□□□□ -1.13
TPM3-215ENST00000469717 RETREG3Q86VR2 466 aa8.02□□□□□ -1.13
TPM3-215ENST00000469717 FSTL5Q8N475 847 aaPredicted RBP8.02□□□□□ -1.13
TPM3-215ENST00000469717 CPSF7Q8N684 471 aaKnown RBP8.02□□□□□ -1.13
TPM3-215ENST00000469717 CCDC185Q8N715 623 aa8.02□□□□□ -1.13
TPM3-215ENST00000469717 CCNYQ8ND76 341 aa8.02□□□□□ -1.13
TPM3-215ENST00000469717 AGBL3Q8NEM8 1001 aa8.02□□□□□ -1.13
TPM3-215ENST00000469717 ABHD11Q8NFV4 315 aa8.02□□□□□ -1.13
TPM3-215ENST00000469717 NSMCE3Q96MG7 304 aa8.02□□□□□ -1.13
TPM3-215ENST00000469717 TCF12Q99081 682 aa8.02□□□□□ -1.13
TPM3-215ENST00000469717 LHPPQ9H008 270 aa8.02□□□□□ -1.13
TPM3-215ENST00000469717 UNC93B1Q9H1C4 597 aa8.02□□□□□ -1.13
TPM3-215ENST00000469717 OSBPL2Q9H1P3 480 aa8.02□□□□□ -1.13
TPM3-215ENST00000469717 IARS2Q9NSE4 1012 aaKnown RBP8.02□□□□□ -1.13
TPM3-215ENST00000469717 XPR1Q9UBH6 696 aa8.02□□□□□ -1.13
TPM3-215ENST00000469717 SIX4Q9UIU6 781 aa8.02□□□□□ -1.13
TPM3-215ENST00000469717 COL16A1Q07092 1604 aaPredicted RBP8.02□□□□□ -1.13
TPM3-215ENST00000469717 KPNA7A9QM74 516 aa8.02□□□□□ -1.13
TPM3-215ENST00000469717 NFKBIEO00221 500 aa8.02□□□□□ -1.13
TPM3-215ENST00000469717 HCRTO43612 131 aa8.02□□□□□ -1.13
TPM3-215ENST00000469717 MFSD11O43934 449 aa8.02□□□□□ -1.13
TPM3-215ENST00000469717 MYO1DO94832 1006 aa8.02□□□□□ -1.13
TPM3-215ENST00000469717 CXCL8P10145 99 aa8.02□□□□□ -1.13
TPM3-215ENST00000469717 LRPAP1P30533 357 aa8.02□□□□□ -1.13
TPM3-215ENST00000469717 LIMK2P53671 638 aa8.02□□□□□ -1.13
TPM3-215ENST00000469717 SP2Q02086 613 aa8.02□□□□□ -1.13
TPM3-215ENST00000469717 SELENBP1Q13228 472 aa8.02□□□□□ -1.13
TPM3-215ENST00000469717 FASTKQ14296 549 aaKnown RBP8.02□□□□□ -1.13
TPM3-215ENST00000469717 INSCQ1MX18 579 aa8.02□□□□□ -1.13
TPM3-215ENST00000469717 OTUD3Q5T2D3 398 aaPredicted RBP8.02□□□□□ -1.13
TPM3-215ENST00000469717 TSTD2Q5T7W7 516 aa8.02□□□□□ -1.13
TPM3-215ENST00000469717 PMF1Q6P1K2 205 aa8.02□□□□□ -1.13
TPM3-215ENST00000469717 RNF19BQ6ZMZ0 732 aa8.02□□□□□ -1.13
TPM3-215ENST00000469717 CLEC14AQ86T13 490 aa8.02□□□□□ -1.13
TPM3-215ENST00000469717 DHFR2Q86XF0 187 aa8.02□□□□□ -1.13
TPM3-215ENST00000469717 HTR3CQ8WXA8 447 aa8.02□□□□□ -1.13
TPM3-215ENST00000469717 VPS39Q96JC1 886 aa8.02□□□□□ -1.13
TPM3-215ENST00000469717 MIR1-1HGQ9H1L0 117 aa8.02□□□□□ -1.13
TPM3-215ENST00000469717 NMRK2Q9NPI5 230 aa8.02□□□□□ -1.13
TPM3-215ENST00000469717 RNF19AQ9NV58 838 aa8.02□□□□□ -1.13
TPM3-215ENST00000469717 WDR70Q9NW82 654 aa8.02□□□□□ -1.13
TPM3-215ENST00000469717 IFT80Q9P2H3 777 aaPredicted RBP8.02□□□□□ -1.13
TPM3-215ENST00000469717 GNPTGQ9UJJ9 305 aa8.02□□□□□ -1.13
TPM3-215ENST00000469717 RUVBL2Q9Y230 463 aaKnown RBP8.02□□□□□ -1.13
TPM3-215ENST00000469717 TRAF6Q9Y4K3 522 aa8.02□□□□□ -1.13
TPM3-215ENST00000469717 MRASO14807 208 aa8.01□□□□□ -1.13
TPM3-215ENST00000469717 SH3BP5O60239 455 aa8.01□□□□□ -1.13
TPM3-215ENST00000469717 SYNCRIPO60506 623 aaKnown RBP8.01□□□□□ -1.13
TPM3-215ENST00000469717 GABBR2O75899 941 aa8.01□□□□□ -1.13
TPM3-215ENST00000469717 NFICP08651 508 aa8.01□□□□□ -1.13
TPM3-215ENST00000469717 IL7RP16871 459 aa8.01□□□□□ -1.13
TPM3-215ENST00000469717 TGM2P21980 687 aa8.01□□□□□ -1.13
TPM3-215ENST00000469717 KCNA5P22460 613 aa8.01□□□□□ -1.13
TPM3-215ENST00000469717 SFNP31947 248 aa8.01□□□□□ -1.13
TPM3-215ENST00000469717 APLP1P51693 650 aa8.01□□□□□ -1.13
TPM3-215ENST00000469717 OXA1LQ15070 435 aa8.01□□□□□ -1.13
TPM3-215ENST00000469717 SLC36A3Q495N2 470 aa8.01□□□□□ -1.13
TPM3-215ENST00000469717 ERMP1Q7Z2K6 904 aa8.01□□□□□ -1.13
TPM3-215ENST00000469717 ZFP90Q8TF47 636 aa8.01□□□□□ -1.13
TPM3-215ENST00000469717 NDRG1Q92597 394 aaKnown RBP8.01□□□□□ -1.13
TPM3-215ENST00000469717 ATP6V0A1Q93050 837 aa8.01□□□□□ -1.13
TPM3-215ENST00000469717 ATG4CQ96DT6 458 aa8.01□□□□□ -1.13
TPM3-215ENST00000469717 MARCH7Q9H992 704 aa8.01□□□□□ -1.13
TPM3-215ENST00000469717 SPAG4Q9NPE6 437 aa8.01□□□□□ -1.13
TPM3-215ENST00000469717 RNF146Q9NTX7 359 aa8.01□□□□□ -1.13
TPM3-215ENST00000469717 CD300AQ9UGN4 299 aa8.01□□□□□ -1.13
TPM3-215ENST00000469717 MTF2Q9Y483 593 aaPredicted RBP8.01□□□□□ -1.13
TPM3-215ENST00000469717 KIAA0100Q14667 2235 aaKnown RBP8.01□□□□□ -1.13
TPM3-215ENST00000469717 NME4O00746 187 aa8.01□□□□□ -1.13
TPM3-215ENST00000469717 CLPXO76031 633 aa8.01□□□□□ -1.13
TPM3-215ENST00000469717 PTGER2P43116 358 aa8.01□□□□□ -1.13
TPM3-215ENST00000469717 GSSP48637 474 aa8.01□□□□□ -1.13
TPM3-215ENST00000469717 GJC2Q5T442 439 aaPredicted RBP8.01□□□□□ -1.13
TPM3-215ENST00000469717 LIPMQ5VYY2 423 aa8.01□□□□□ -1.13
TPM3-215ENST00000469717 NCBP2-AS2Q69YL0 99 aa8.01□□□□□ -1.13
TPM3-215ENST00000469717 CLEC6AQ6EIG7 209 aa8.01□□□□□ -1.13
TPM3-215ENST00000469717 ANKRD13BQ86YJ7 626 aa8.01□□□□□ -1.13
TPM3-215ENST00000469717 WDR49Q8IV35 697 aa8.01□□□□□ -1.13
TPM3-215ENST00000469717 SLC41A1Q8IVJ1 513 aa8.01□□□□□ -1.13
TPM3-215ENST00000469717 CDKL3Q8IVW4 592 aaPredicted RBP8.01□□□□□ -1.13
TPM3-215ENST00000469717 LRRC71Q8N4P6 559 aa8.01□□□□□ -1.13
TPM3-215ENST00000469717 CNTD1Q8N815 330 aa8.01□□□□□ -1.13
TPM3-215ENST00000469717 SHCBP1Q8NEM2 672 aa8.01□□□□□ -1.13
TPM3-215ENST00000469717 TRUB1Q8WWH5 349 aaKnown RBP8.01□□□□□ -1.13
TPM3-215ENST00000469717 KHSRPQ92945 711 aaKnown RBP eCLIP8.01□□□□□ -1.13
TPM3-215ENST00000469717 NXNL1Q96CM4 212 aa8.01□□□□□ -1.13
TPM3-215ENST00000469717 LHX5Q9H2C1 402 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms