RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 ANKDD1AQ495B1 522 aa11.84□□□□□ -0.51
PDZRN3-203ENST00000462146 KIAA0319Q5VV43 1072 aa11.84□□□□□ -0.51
PDZRN3-203ENST00000462146 CLEC6AQ6EIG7 209 aa11.84□□□□□ -0.51
PDZRN3-203ENST00000462146 ITPRIPL1Q6GPH6 555 aa11.84□□□□□ -0.51
PDZRN3-203ENST00000462146 CLEC20AQ6ZU45 233 aa11.84□□□□□ -0.51
PDZRN3-203ENST00000462146 APPL2Q8NEU8 664 aa11.84□□□□□ -0.51
PDZRN3-203ENST00000462146 CANT1Q8WVQ1 401 aa11.84□□□□□ -0.51
PDZRN3-203ENST00000462146 SLC45A3Q96JT2 553 aa11.84□□□□□ -0.51
PDZRN3-203ENST00000462146 TEKT5Q96M29 485 aa11.84□□□□□ -0.51
PDZRN3-203ENST00000462146 FAM210AQ96ND0 272 aa11.84□□□□□ -0.51
PDZRN3-203ENST00000462146 KIFC1Q9BW19 673 aa11.84□□□□□ -0.51
PDZRN3-203ENST00000462146 DUSP16Q9BY84 665 aa11.84□□□□□ -0.51
PDZRN3-203ENST00000462146 ULBP1Q9BZM6 244 aa11.84□□□□□ -0.51
PDZRN3-203ENST00000462146 DNAI2Q9GZS0 605 aa11.84□□□□□ -0.51
PDZRN3-203ENST00000462146 RNF39Q9H2S5 420 aa11.84□□□□□ -0.51
PDZRN3-203ENST00000462146 ATXN3LQ9H3M9 355 aa11.84□□□□□ -0.51
PDZRN3-203ENST00000462146 LRRC4Q9HBW1 653 aa11.84□□□□□ -0.51
PDZRN3-203ENST00000462146 MIA3Q5JRA6 1907 aa11.84□□□□□ -0.51
PDZRN3-203ENST00000462146 PSMD12O00232 456 aaPredicted RBP11.84□□□□□ -0.51
PDZRN3-203ENST00000462146 PIRO00625 290 aa11.84□□□□□ -0.51
PDZRN3-203ENST00000462146 SEC24DO94855 1032 aaPredicted RBP11.84□□□□□ -0.51
PDZRN3-203ENST00000462146 CLIC3O95833 236 aa11.84□□□□□ -0.51
PDZRN3-203ENST00000462146 GRIA3P42263 894 aa11.84□□□□□ -0.51
PDZRN3-203ENST00000462146 SLC7A2P52569 658 aa11.84□□□□□ -0.51
PDZRN3-203ENST00000462146 KCTD2Q14681 263 aa11.84□□□□□ -0.51
PDZRN3-203ENST00000462146 NHSL2Q5HYW2 709 aa11.84□□□□□ -0.51
PDZRN3-203ENST00000462146 SIX6OS1Q8N1H7 587 aa11.84□□□□□ -0.51
PDZRN3-203ENST00000462146 IPMKQ8NFU5 416 aa11.84□□□□□ -0.51
PDZRN3-203ENST00000462146 EDEM1Q92611 657 aa11.84□□□□□ -0.51
PDZRN3-203ENST00000462146 HDAC11Q96DB2 347 aa11.84□□□□□ -0.51
PDZRN3-203ENST00000462146 PHF21BQ96EK2 531 aa11.84□□□□□ -0.51
PDZRN3-203ENST00000462146 OTUD5Q96G74 571 aa11.84□□□□□ -0.51
PDZRN3-203ENST00000462146 SLC2A13Q96QE2 648 aa11.84□□□□□ -0.51
PDZRN3-203ENST00000462146 TRIM8Q9BZR9 551 aa11.84□□□□□ -0.51
PDZRN3-203ENST00000462146 MRPL46Q9H2W6 279 aaKnown RBP11.84□□□□□ -0.51
PDZRN3-203ENST00000462146 IL1RL2Q9HB29 575 aa11.84□□□□□ -0.51
PDZRN3-203ENST00000462146 PNPLA3Q9NST1 481 aa11.84□□□□□ -0.51
PDZRN3-203ENST00000462146 TMEM30AQ9NV96 361 aa11.84□□□□□ -0.51
PDZRN3-203ENST00000462146 UTP6Q9NYH9 597 aaKnown RBP11.84□□□□□ -0.51
PDZRN3-203ENST00000462146 NCKIPSDQ9NZQ3 722 aa11.84□□□□□ -0.51
PDZRN3-203ENST00000462146 THEGQ9P2T0 379 aa11.84□□□□□ -0.51
PDZRN3-203ENST00000462146 RBPJLQ9UBG7 517 aa11.84□□□□□ -0.51
PDZRN3-203ENST00000462146 CD300AQ9UGN4 299 aa11.84□□□□□ -0.51
PDZRN3-203ENST00000462146 ANKRD12Q6UB98 2062 aa11.84□□□□□ -0.51
PDZRN3-203ENST00000462146 MAGEB16A2A368 324 aa11.83□□□□□ -0.51
PDZRN3-203ENST00000462146 TRPC5OSA6NMA1 111 aa11.83□□□□□ -0.51
PDZRN3-203ENST00000462146 MRASO14807 208 aa11.83□□□□□ -0.51
PDZRN3-203ENST00000462146 UBDO15205 165 aa11.83□□□□□ -0.51
PDZRN3-203ENST00000462146 AKAP10O43572 662 aa11.83□□□□□ -0.51
PDZRN3-203ENST00000462146 NPHS1O60500 1241 aa11.83□□□□□ -0.51
PDZRN3-203ENST00000462146 TFPTP0C1Z6 253 aa11.83□□□□□ -0.51
PDZRN3-203ENST00000462146 NPR3P17342 541 aa11.83□□□□□ -0.51
PDZRN3-203ENST00000462146 CHRNA4P43681 627 aa11.83□□□□□ -0.51
PDZRN3-203ENST00000462146 PSMD8P48556 350 aa11.83□□□□□ -0.51
PDZRN3-203ENST00000462146 PRKAA2P54646 552 aa11.83□□□□□ -0.51
PDZRN3-203ENST00000462146 PLOD1Q02809 727 aaPredicted RBP11.83□□□□□ -0.51
PDZRN3-203ENST00000462146 PRKCQQ04759 706 aa11.83□□□□□ -0.51
PDZRN3-203ENST00000462146 NOMO2Q5JPE7 1267 aa11.83□□□□□ -0.51
PDZRN3-203ENST00000462146 ZBTB49Q6ZSB9 765 aa11.83□□□□□ -0.51
PDZRN3-203ENST00000462146 CATSPER4Q7RTX7 472 aa11.83□□□□□ -0.51
PDZRN3-203ENST00000462146 CLVS1Q8IUQ0 354 aaPredicted RBP11.83□□□□□ -0.51
PDZRN3-203ENST00000462146 ALDH16A1Q8IZ83 802 aa11.83□□□□□ -0.51
PDZRN3-203ENST00000462146 OSMRQ99650 979 aa11.83□□□□□ -0.51
PDZRN3-203ENST00000462146 C16orf70Q9BSU1 422 aa11.83□□□□□ -0.51
PDZRN3-203ENST00000462146 SPAG4Q9NPE6 437 aa11.83□□□□□ -0.51
PDZRN3-203ENST00000462146 DDIT4Q9NX09 232 aa11.83□□□□□ -0.51
PDZRN3-203ENST00000462146 GIMAP2Q9UG22 337 aa11.83□□□□□ -0.51
PDZRN3-203ENST00000462146 CDC14AQ9UNH5 594 aa11.83□□□□□ -0.51
PDZRN3-203ENST00000462146 ZNF510Q9Y2H8 683 aa11.83□□□□□ -0.51
PDZRN3-203ENST00000462146 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.83□□□□□ -0.52
PDZRN3-203ENST00000462146 DLGAP1O14490 977 aa11.83□□□□□ -0.52
PDZRN3-203ENST00000462146 TPST1O60507 370 aa11.83□□□□□ -0.52
PDZRN3-203ENST00000462146 NCAM1P13591 858 aa11.83□□□□□ -0.52
PDZRN3-203ENST00000462146 YBX3P16989 372 aaKnown RBP eCLIP11.83□□□□□ -0.52
PDZRN3-203ENST00000462146 LRPAP1P30533 357 aa11.83□□□□□ -0.52
PDZRN3-203ENST00000462146 SLC7A1P30825 629 aa11.83□□□□□ -0.52
PDZRN3-203ENST00000462146 ARCN1P48444 511 aaKnown RBP11.83□□□□□ -0.52
PDZRN3-203ENST00000462146 GALNT2Q10471 571 aa11.83□□□□□ -0.52
PDZRN3-203ENST00000462146 ADRM1Q16186 407 aa11.83□□□□□ -0.52
PDZRN3-203ENST00000462146 DCAF4L1Q3SXM0 396 aa11.83□□□□□ -0.52
PDZRN3-203ENST00000462146 SLC27A1Q6PCB7 646 aa11.83□□□□□ -0.52
PDZRN3-203ENST00000462146 ELMSAN1Q6PJG2 1045 aa11.83□□□□□ -0.52
PDZRN3-203ENST00000462146 ALKAL1Q6UXT8 129 aa11.83□□□□□ -0.52
PDZRN3-203ENST00000462146 CUZD1Q86UP6 607 aa11.83□□□□□ -0.52
PDZRN3-203ENST00000462146 EPHX4Q8IUS5 362 aa11.83□□□□□ -0.52
PDZRN3-203ENST00000462146 IRGQQ8WZA9 623 aa11.83□□□□□ -0.52
PDZRN3-203ENST00000462146 MPHOSPH6Q99547 160 aaKnown RBP11.83□□□□□ -0.52
PDZRN3-203ENST00000462146 OLFM1Q99784 485 aa11.83□□□□□ -0.52
PDZRN3-203ENST00000462146 MED10Q9BTT4 135 aa11.83□□□□□ -0.52
PDZRN3-203ENST00000462146 ANKRD60Q9BZ19 345 aa11.83□□□□□ -0.52
PDZRN3-203ENST00000462146 ELP3Q9H9T3 547 aa11.83□□□□□ -0.52
PDZRN3-203ENST00000462146 PLEKHA5Q9HAU0 1116 aa11.83□□□□□ -0.52
PDZRN3-203ENST00000462146 IGSF5Q9NSI5 407 aa11.83□□□□□ -0.52
PDZRN3-203ENST00000462146 RRN3Q9NYV6 651 aa11.83□□□□□ -0.52
PDZRN3-203ENST00000462146 NYNRINQ9P2P1 1898 aaKnown RBP11.83□□□□□ -0.52
PDZRN3-203ENST00000462146 BRCA1P38398 1863 aaKnown RBP11.83□□□□□ -0.52
PDZRN3-203ENST00000462146 SMIM28A0A1B0GU29 152 aa11.83□□□□□ -0.52
PDZRN3-203ENST00000462146 ERI2A8K979 691 aaKnown RBP11.83□□□□□ -0.52
PDZRN3-203ENST00000462146 A8MT66 165 aa11.83□□□□□ -0.52
PDZRN3-203ENST00000462146 HNRNPCP07910 306 aaKnown RBP eCLIP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms