RNA–Protein interactions for RNA: ENST00000357179.9

TOP3B-201, Transcript of DNA topoisomerase III beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3B, Length 2,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-201ENST00000357179 VTI1BQ9UEU0 232 aa14.81□□□□□ -0.04
TOP3B-201ENST00000357179 SLC27A5Q9Y2P5 690 aa14.81□□□□□ -0.04
TOP3B-201ENST00000357179 CLOCKO15516 846 aa14.8□□□□□ -0.04
TOP3B-201ENST00000357179 MSI1O43347 362 aaKnown RBP14.8□□□□□ -0.04
TOP3B-201ENST00000357179 KCNH1O95259 989 aa14.8□□□□□ -0.04
TOP3B-201ENST00000357179 MAP3K6O95382 1288 aa14.8□□□□□ -0.04
TOP3B-201ENST00000357179 STAG3L1P0CL83 205 aa14.8□□□□□ -0.04
TOP3B-201ENST00000357179 EPHX2P34913 555 aa14.8□□□□□ -0.04
TOP3B-201ENST00000357179 PTPN9P43378 593 aa14.8□□□□□ -0.04
TOP3B-201ENST00000357179 IFITM2Q01629 132 aa14.8□□□□□ -0.04
TOP3B-201ENST00000357179 GBE1Q04446 702 aa14.8□□□□□ -0.04
TOP3B-201ENST00000357179 LRP8Q14114 963 aa14.8□□□□□ -0.04
TOP3B-201ENST00000357179 NBPF12Q5TAG4 269 aaPredicted RBP14.8□□□□□ -0.04
TOP3B-201ENST00000357179 ANKRD13BQ86YJ7 626 aa14.8□□□□□ -0.04
TOP3B-201ENST00000357179 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.8□□□□□ -0.04
TOP3B-201ENST00000357179 CANT1Q8WVQ1 401 aa14.8□□□□□ -0.04
TOP3B-201ENST00000357179 FBXL20Q96IG2 436 aa14.8□□□□□ -0.04
TOP3B-201ENST00000357179 GLT1D1Q96MS3 346 aa14.8□□□□□ -0.04
TOP3B-201ENST00000357179 OXSMQ9NWU1 459 aa14.8□□□□□ -0.04
TOP3B-201ENST00000357179 HACD3Q9P035 362 aa14.8□□□□□ -0.04
TOP3B-201ENST00000357179 EP400Q96L91 3159 aa14.8□□□□□ -0.04
TOP3B-201ENST00000357179 CLIC3O95833 236 aa14.8□□□□□ -0.04
TOP3B-201ENST00000357179 C7P10643 843 aa14.8□□□□□ -0.04
TOP3B-201ENST00000357179 POLR2IP36954 125 aaKnown RBP14.8□□□□□ -0.04
TOP3B-201ENST00000357179 GARSP41250 739 aaKnown RBP14.8□□□□□ -0.04
TOP3B-201ENST00000357179 TPTEP56180 551 aa14.8□□□□□ -0.04
TOP3B-201ENST00000357179 TUBA3CQ13748 450 aa14.8□□□□□ -0.04
TOP3B-201ENST00000357179 PKDCCQ504Y2 493 aa14.8□□□□□ -0.04
TOP3B-201ENST00000357179 GK5Q6ZS86 529 aa14.8□□□□□ -0.04
TOP3B-201ENST00000357179 ANKRD13AQ8IZ07 590 aa14.8□□□□□ -0.04
TOP3B-201ENST00000357179 CSF3RQ99062 836 aa14.8□□□□□ -0.04
TOP3B-201ENST00000357179 WDR12Q9GZL7 423 aaKnown RBP14.8□□□□□ -0.04
TOP3B-201ENST00000357179 HMG20AQ9NP66 347 aa14.8□□□□□ -0.04
TOP3B-201ENST00000357179 PRMT7Q9NVM4 692 aaPredicted RBP14.8□□□□□ -0.04
TOP3B-201ENST00000357179 SFMBT1Q9UHJ3 866 aa14.8□□□□□ -0.04
TOP3B-201ENST00000357179 A0A0A0MRY4 1105 aa14.79□□□□□ -0.04
TOP3B-201ENST00000357179 SLCO1B7G3V0H7 640 aa14.79□□□□□ -0.04
TOP3B-201ENST00000357179 PIGNO95427 931 aa14.79□□□□□ -0.04
TOP3B-201ENST00000357179 JUNP05412 331 aaKnown RBP14.79□□□□□ -0.04
TOP3B-201ENST00000357179 GP5P40197 560 aa14.79□□□□□ -0.04
TOP3B-201ENST00000357179 MPP1Q00013 466 aa14.79□□□□□ -0.04
TOP3B-201ENST00000357179 PRKAA1Q13131 559 aa14.79□□□□□ -0.04
TOP3B-201ENST00000357179 KYAT1Q16773 422 aa14.79□□□□□ -0.04
TOP3B-201ENST00000357179 FAM187BQ17R55 369 aa14.79□□□□□ -0.04
TOP3B-201ENST00000357179 KIZQ2M2Z5 673 aa14.79□□□□□ -0.04
TOP3B-201ENST00000357179 CASC4Q6P4E1 433 aa14.79□□□□□ -0.04
TOP3B-201ENST00000357179 CLEC14AQ86T13 490 aa14.79□□□□□ -0.04
TOP3B-201ENST00000357179 FAM110BQ8TC76 370 aa14.79□□□□□ -0.04
TOP3B-201ENST00000357179 SPATA13Q96N96 652 aa14.79□□□□□ -0.04
TOP3B-201ENST00000357179 SPAG4Q9NPE6 437 aa14.79□□□□□ -0.04
TOP3B-201ENST00000357179 DKK3Q9UBP4 350 aa14.79□□□□□ -0.04
TOP3B-201ENST00000357179 ZDHHC2Q9UIJ5 367 aa14.79□□□□□ -0.04
TOP3B-201ENST00000357179 ADAM28Q9UKQ2 775 aa14.79□□□□□ -0.04
TOP3B-201ENST00000357179 GMNNO75496 209 aa14.79□□□□□ -0.04
TOP3B-201ENST00000357179 MBL2P11226 248 aaPredicted RBP14.79□□□□□ -0.04
TOP3B-201ENST00000357179 GOLGA7BQ2TAP0 167 aa14.79□□□□□ -0.04
TOP3B-201ENST00000357179 INAVAQ3KP66 663 aa14.79□□□□□ -0.04
TOP3B-201ENST00000357179 ARL13AQ5H913 290 aaPredicted RBP14.79□□□□□ -0.04
TOP3B-201ENST00000357179 GLRA4Q5JXX5 417 aa14.79□□□□□ -0.04
TOP3B-201ENST00000357179 LDLRAP1Q5SW96 308 aa14.79□□□□□ -0.04
TOP3B-201ENST00000357179 DPH6Q7L8W6 267 aa14.79□□□□□ -0.04
TOP3B-201ENST00000357179 CHST15Q7LFX5 561 aaPredicted RBP14.79□□□□□ -0.04
TOP3B-201ENST00000357179 TTC30BQ8N4P2 665 aa14.79□□□□□ -0.04
TOP3B-201ENST00000357179 DCLK2Q8N568 766 aa14.79□□□□□ -0.04
TOP3B-201ENST00000357179 LRRN4Q8WUT4 740 aa14.79□□□□□ -0.04
TOP3B-201ENST00000357179 CYGBQ8WWM9 190 aa14.79□□□□□ -0.04
TOP3B-201ENST00000357179 HTR3CQ8WXA8 447 aa14.79□□□□□ -0.04
TOP3B-201ENST00000357179 SNX19Q92543 992 aa14.79□□□□□ -0.04
TOP3B-201ENST00000357179 CENPIQ92674 756 aaPredicted RBP14.79□□□□□ -0.04
TOP3B-201ENST00000357179 CLIP3Q96DZ5 547 aa14.79□□□□□ -0.04
TOP3B-201ENST00000357179 MOCOSQ96EN8 888 aa14.79□□□□□ -0.04
TOP3B-201ENST00000357179 C11orf84Q9BUA3 381 aaPredicted RBP14.79□□□□□ -0.04
TOP3B-201ENST00000357179 UPF3AQ9H1J1 476 aaKnown RBP14.79□□□□□ -0.04
TOP3B-201ENST00000357179 AKIP1Q9NQ31 210 aa14.79□□□□□ -0.04
TOP3B-201ENST00000357179 CCM2LQ9NUG4 571 aaPredicted RBP14.79□□□□□ -0.04
TOP3B-201ENST00000357179 CACNA2D2Q9NY47 1150 aa14.79□□□□□ -0.04
TOP3B-201ENST00000357179 ATP11BQ9Y2G3 1177 aa14.79□□□□□ -0.04
TOP3B-201ENST00000357179 A8MU76 341 aa14.79□□□□□ -0.04
TOP3B-201ENST00000357179 TNFRSF10AO00220 468 aa14.79□□□□□ -0.04
TOP3B-201ENST00000357179 RGS13O14921 159 aa14.79□□□□□ -0.04
TOP3B-201ENST00000357179 EGFRP00533 1210 aa14.79□□□□□ -0.04
TOP3B-201ENST00000357179 CCR10P46092 362 aa14.79□□□□□ -0.04
TOP3B-201ENST00000357179 CRADDP78560 199 aa14.79□□□□□ -0.04
TOP3B-201ENST00000357179 IFITM3Q01628 133 aa14.79□□□□□ -0.04
TOP3B-201ENST00000357179 POU5F1BQ06416 359 aa14.79□□□□□ -0.04
TOP3B-201ENST00000357179 GTF2IRD2BQ6EKJ0 949 aa14.79□□□□□ -0.04
TOP3B-201ENST00000357179 ZNF773Q6PK81 442 aa14.79□□□□□ -0.04
TOP3B-201ENST00000357179 GTF2IRD2Q86UP8 949 aa14.79□□□□□ -0.04
TOP3B-201ENST00000357179 CDR2LQ86X02 465 aaPredicted RBP14.79□□□□□ -0.04
TOP3B-201ENST00000357179 OFCC1Q8IZS5 231 aa14.79□□□□□ -0.04
TOP3B-201ENST00000357179 OR2T34Q8NGX1 318 aa14.79□□□□□ -0.04
TOP3B-201ENST00000357179 OR2T3Q8NH03 318 aa14.79□□□□□ -0.04
TOP3B-201ENST00000357179 ARNTL2Q8WYA1 636 aa14.79□□□□□ -0.04
TOP3B-201ENST00000357179 GPR20Q99678 358 aa14.79□□□□□ -0.04
TOP3B-201ENST00000357179 C9orf16Q9BUW7 83 aa14.79□□□□□ -0.04
TOP3B-201ENST00000357179 RMND5AQ9H871 391 aa14.79□□□□□ -0.04
TOP3B-201ENST00000357179 SCUBE2Q9NQ36 999 aa14.79□□□□□ -0.04
TOP3B-201ENST00000357179 TXNDC16Q9P2K2 825 aa14.79□□□□□ -0.04
TOP3B-201ENST00000357179 UGT2B4P06133 528 aa14.78□□□□□ -0.04
TOP3B-201ENST00000357179 RPS12P25398 132 aaKnown RBP14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms